{ "type": "genome", "identifier": "GCF_000577895.1", "organism": "Clostridium bornimense", "title": "Clostridium bornimense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "CEBITEC", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000577895.1", "bioproject": "PRJNA224116", "biosample": "SAMEA3138942", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1216932", "species_taxid": "1216932", "organism_name": "Clostridium bornimense", "infraspecific_name": "strain=M2/40", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/02/11", "asm_name": "M2/40", "asm_submitter": "CEBITEC", "gbrs_paired_asm": "GCA_000577895.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/577/895/GCF_000577895.1_M2_40", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3617025", "genome_size_ungapped": "3617025", "gc_percent": "29.500000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000577895.1-RS_2024_04_11", "annotation_date": "2024-04-11", "total_gene_count": "3384", "protein_coding_gene_count": "3276", "non_coding_gene_count": "85", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-02-11", "dateModified": "2014-02-11", "datePublished": "2014-02-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Clostridium bornimense" ], "sample_taxid": [ "1216932" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "0.979 MB", 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"Clostridium paraputrificum", "strain": "strain=NCTC11833", "accession": "GCA_900447045.1", "taxid": 29363, "species_taxid": 29363, "relation_to_type": "type", "validated": true, "ani": 77.9023, "matched_fragments": 169, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium cellulovorans", "strain": "strain=743B", "accession": "GCA_000145275.1", "taxid": 1493, "species_taxid": 1493, "relation_to_type": "type", "validated": true, "ani": 77.7301, "matched_fragments": 172, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium isatidis", "strain": "strain=DSM 15098", "accession": "GCA_002285495.1", "taxid": 182773, "species_taxid": 182773, "relation_to_type": "type", "validated": true, "ani": 77.6305, "matched_fragments": 142, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium lundense", "strain": "strain=DSM 17049", 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76.7078, "matched_fragments": 177, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium niameyense", "strain": "strain=MT5", "accession": "GCA_001243045.1", "taxid": 1622073, "species_taxid": 1622073, "relation_to_type": "type", "validated": true, "ani": 76.5931, "matched_fragments": 139, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium moniliforme", "strain": "strain=DSM 3984", "accession": "GCA_017873235.1", "taxid": 39489, "species_taxid": 39489, "relation_to_type": "type", "validated": true, "ani": 76.3537, "matched_fragments": 162, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium mobile", "strain": "strain=MSJ-11", "accession": "GCA_018918285.1", "taxid": 2841512, "species_taxid": 2841512, "relation_to_type": "type", "validated": true, "ani": 76.2365, "matched_fragments": 103, "total_fragments": 1205, 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"organism_name": "Clostridium faecium", "strain": "strain=N37", "accession": "GCA_014836835.1", "taxid": 2762223, "species_taxid": 2762223, "relation_to_type": "type", "validated": true, "ani": 76.206, "matched_fragments": 147, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium senegalense", "strain": "strain=type strain: JC122", "accession": "GCA_000285575.1", "taxid": 1465809, "species_taxid": 1465809, "relation_to_type": "type", "validated": true, "ani": 76.1869, "matched_fragments": 148, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium acetireducens", "strain": "strain=DSM 10703", "accession": "GCA_001758365.1", "taxid": 76489, "species_taxid": 76489, "relation_to_type": "type", "validated": true, "ani": 76.1721, "matched_fragments": 126, "total_fragments": 1205, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium botulinum", 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