{
    "type": "genome",
    "identifier": "GCF_000585335.1",
    "organism": "Cloacibacillus evryensis DSM 19522",
    "title": "Cloacibacillus evryensis DSM 19522",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000585335.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN00778811",
        "wgs_master": "JFBR00000000.1",
        "refseq_category": "reference genome",
        "taxid": "866499",
        "species_taxid": "508460",
        "organism_name": "Cloacibacillus evryensis DSM 19522",
        "infraspecific_name": "strain=DSM 19522",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/03/04",
        "asm_name": "ASM58533v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_000585335.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/585/335/GCF_000585335.1_ASM58533v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3488464",
        "genome_size_ungapped": "3488364",
        "gc_percent": "56.000000",
        "replicon_count": "0",
        "scaffold_count": "1",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000585335.1-RS_2024_05_02",
        "annotation_date": "2024-05-02",
        "total_gene_count": "3166",
        "protein_coding_gene_count": "3082",
        "non_coding_gene_count": "66",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-03-04",
    "dateModified": "2014-03-04",
    "datePublished": "2014-03-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cloacibacillus evryensis DSM 19522"
        ],
        "sample_taxid": [
            "866499"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.982 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3488464",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3488464",
        "N50 (bp)": "3488464",
        "Gap Ratio (%)": "0.002895",
        "GCcontent (%)": "56.0",
        "Number of CDSs": "3128",
        "Average Protein Length": "324.9",
        "Coding Ratio (%)": "87.4",
        "Number of rRNAs": "15",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "8"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Cloacibacillus evryensis",
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                "accession": "GCA_000585335.1",
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                "relation_to_type": "type",
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                "total_fragments": 1162,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cloacibacillus porcorum",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Synergistes jonesii",
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                "accession": "GCA_001757485.1",
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                "species_taxid": 2754,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_000712295.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Synergistes jonesii",
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                "accession": "GCA_001757465.1",
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                "species_taxid": 2754,
                "relation_to_type": "type",
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                "total_fragments": 1162,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_000585335.1",
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                "matched_fragments": 1161,
                "total_fragments": 1162,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.47",
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            },
            {
                "accession": "GCF_001701045.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900544635.1",
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                "num_clustered_genomes": 3,
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            },
            {
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                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_018716365.1",
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                "ani": 78.6347,
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                "total_fragments": 1162,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Caccocola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "matched_fragments": 342,
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                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Caccocola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.097,
        "cell_length": 0.301,
        "doubling_h": null,
        "growth_tmp": 37.0,
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        "gc_content": 55.9,
        "coding_genes": 3115.5,
        "rRNA16S_genes": 5.0,
        "tRNA_genes": 51.0,
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        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
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        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Cloacibacillus",
        "evryensis",
        "DSM",
        "19522"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}