{
    "type": "genome",
    "identifier": "GCF_000591055.1",
    "organism": "Natronomonas moolapensis 8.8.11",
    "title": "Natronomonas moolapensis 8.8.11",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Max-Planck-Institute of Biochemistry",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000591055.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA3138954",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "268739",
        "species_taxid": "416273",
        "organism_name": "Natronomonas moolapensis 8.8.11",
        "infraspecific_name": "strain=8.8.11",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2013/02/21",
        "asm_name": "ASM59105v1",
        "asm_submitter": "Max-Planck-Institute of Biochemistry",
        "gbrs_paired_asm": "GCA_000591055.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/591/055/GCF_000591055.1_ASM59105v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "2912573",
        "genome_size_ungapped": "2912573",
        "gc_percent": "64.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000591055.1-RS_2024_10_21",
        "annotation_date": "2024-10-21",
        "total_gene_count": "2948",
        "protein_coding_gene_count": "2808",
        "non_coding_gene_count": "50",
        "pubmed_id": "23516216"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2013-02-21",
    "dateModified": "2013-02-21",
    "datePublished": "2013-02-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Natronomonas moolapensis 8.8.11"
        ],
        "sample_taxid": [
            "268739"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.796 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2912573",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2912573",
        "N50 (bp)": "2912573",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.5",
        "Number of CDSs": "2869",
        "Average Protein Length": "291.7",
        "Coding Ratio (%)": "86.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Natronomonas moolapensis",
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                "taxid": 416273,
                "species_taxid": 416273,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 968,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Natronomonas salsuginis",
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                "accession": "GCA_005239135.1",
                "taxid": 2217661,
                "species_taxid": 2217661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.1113,
                "matched_fragments": 506,
                "total_fragments": 970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Natronomonas salina",
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                "accession": "GCA_013391105.1",
                "taxid": 1710540,
                "species_taxid": 1710540,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Natronomonas halophila",
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                "accession": "GCA_013391085.1",
                "taxid": 2747817,
                "species_taxid": 2747817,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1751,
                "matched_fragments": 386,
                "total_fragments": 970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Natronomonas pharaonis",
                "strain": "strain=Gabara",
                "accession": "GCA_000026045.1",
                "taxid": 2257,
                "species_taxid": 2257,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8738,
                "matched_fragments": 369,
                "total_fragments": 970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halostella litorea",
                "strain": "strain=DLLS-108",
                "accession": "GCA_004785955.1",
                "taxid": 2528831,
                "species_taxid": 2528831,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4296,
                "matched_fragments": 338,
                "total_fragments": 970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halapricum salinum",
                "strain": "strain=CBA1105",
                "accession": "GCA_000755225.1",
                "taxid": 1457250,
                "species_taxid": 1457250,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2131,
                "matched_fragments": 247,
                "total_fragments": 970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halapricum salinum",
                "strain": "strain=CBA1105",
                "accession": "GCA_004799665.1",
                "taxid": 1457250,
                "species_taxid": 1457250,
                "relation_to_type": "type",
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                "ani": 77.1612,
                "matched_fragments": 246,
                "total_fragments": 970,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000591055.1",
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                "ani": 100.0,
                "matched_fragments": 969,
                "total_fragments": 970,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "conclusive"
            },
            {
                "accession": "GCF_013839515.1",
                "gtdb_species": "s__Natronomonas sp013839515",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCF_013391105.1",
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                "total_fragments": 970,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003020965.1",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
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                "min_intra_species_ani": "N/A",
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            },
            {
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                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_003021655.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.023,
        "cell_length": 0.161,
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        "growth_tmp": 37.0,
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        "genome_size": 2912572.4,
        "gc_content": 64.5,
        "coding_genes": 2741.0,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 45.0,
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        "facultative_respiration": 0.0,
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        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
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        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Natronomonas",
        "moolapensis",
        "8.8.11"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}