{ "type": "genome", "identifier": "GCF_000613825.1", "organism": "Bacteroides graminisolvens DSM 19988 = JCM 15093", "title": "Bacteroides graminisolvens DSM 19988 = JCM 15093", "description": "na", "data type": "Genome sequencing and assembly", "organization": "The University of Tokyo", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000613825.1", "bioproject": "PRJNA224116", "biosample": "SAMD00016568", "wgs_master": "BAJS00000000.1", "refseq_category": "na", "taxid": "1121097", "species_taxid": "477666", "organism_name": "Bacteroides graminisolvens DSM 19988 = JCM 15093", "infraspecific_name": "strain=JCM 15093", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/03/31", "asm_name": "ASM61382v1", "asm_submitter": "The University of Tokyo", "gbrs_paired_asm": "GCA_000613825.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/613/825/GCF_000613825.1_ASM61382v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3680704", "genome_size_ungapped": "3680704", "gc_percent": "41.500000", "replicon_count": "0", "scaffold_count": "63", "contig_count": "63", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2023-08-06", "total_gene_count": "3236", "protein_coding_gene_count": "2772", "non_coding_gene_count": "63", "pubmed_id": "25736980" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-03-31", "dateModified": "2014-03-31", "datePublished": "2014-03-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Bacteroides graminisolvens DSM 19988 = JCM 15093" ], "sample_taxid": [ "1121097" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.052 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3680704", "Number of Sequences": "63", "Longest Sequences (bp)": "443569", "N50 (bp)": "128246", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "41.5", "Number of CDSs": "3371", "Average Protein Length": "322.6", "Coding Ratio (%)": "88.6", "Number of rRNAs": "3", "Number of tRNAs": "58", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Bacteroides graminisolvens", "strain": "strain=JCM 15093", "accession": "GCA_000613825.1", "taxid": 477666, 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