{
    "type": "genome",
    "identifier": "GCF_000614205.1",
    "organism": "Hoylesella saccharolytica JCM 17484",
    "title": "Hoylesella saccharolytica JCM 17484",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Tokyo",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000614205.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00006087",
        "wgs_master": "BAKN00000000.1",
        "refseq_category": "na",
        "taxid": "1236516",
        "species_taxid": "633701",
        "organism_name": "Hoylesella saccharolytica JCM 17484",
        "infraspecific_name": "strain=JCM 17484",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/03/31",
        "asm_name": "ASM61420v1",
        "asm_submitter": "The University of Tokyo",
        "gbrs_paired_asm": "GCA_000614205.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/614/205/GCF_000614205.1_ASM61420v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2975513",
        "genome_size_ungapped": "2975513",
        "gc_percent": "43.500000",
        "replicon_count": "0",
        "scaffold_count": "82",
        "contig_count": "82",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2023-09-14",
        "total_gene_count": "2493",
        "protein_coding_gene_count": "2111",
        "non_coding_gene_count": "55",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-03-31",
    "dateModified": "2014-03-31",
    "datePublished": "2014-03-31",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Hoylesella saccharolytica JCM 17484"
        ],
        "sample_taxid": [
            "1236516"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.849 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2975513",
        "Number of Sequences": "82",
        "Longest Sequences (bp)": "400690",
        "N50 (bp)": "84653",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.3",
        "Number of CDSs": "2581",
        "Average Protein Length": "316.2",
        "Coding Ratio (%)": "82.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Prevotella saccharolytica",
                "strain": "strain=JCM 17484",
                "accession": "GCA_000614205.1",
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                "species_taxid": 633701,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 950,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Prevotella nigrescens",
                "strain": "strain=FDAARGOS_1486",
                "accession": "GCA_019930605.1",
                "taxid": 28133,
                "species_taxid": 28133,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.1411,
                "matched_fragments": 68,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella nigrescens",
                "strain": "strain=NCTC9336",
                "accession": "GCA_900454985.1",
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                "species_taxid": 28133,
                "relation_to_type": "type",
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                "ani": 83.1146,
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                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella nigrescens",
                "strain": "strain=ATCC 33563",
                "accession": "GCA_000220235.1",
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                "species_taxid": 28133,
                "relation_to_type": "type",
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                "ani": 82.9993,
                "matched_fragments": 69,
                "total_fragments": 954,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella oris",
                "strain": "strain=DSM 18711",
                "accession": "GCA_000377685.1",
                "taxid": 28135,
                "species_taxid": 28135,
                "relation_to_type": "type",
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                "ani": 81.8843,
                "matched_fragments": 99,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella oulorum",
                "strain": "strain=ATCC 43324",
                "accession": "GCA_900167385.1",
                "taxid": 28136,
                "species_taxid": 28136,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.8236,
                "matched_fragments": 86,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella oulorum",
                "strain": "strain=JCM 14966",
                "accession": "GCA_000613785.1",
                "taxid": 28136,
                "species_taxid": 28136,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.6057,
                "matched_fragments": 85,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella oris",
                "strain": "strain=JCM 12252",
                "accession": "GCA_000613505.1",
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                "species_taxid": 28135,
                "relation_to_type": "type",
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                "matched_fragments": 92,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella aurantiaca",
                "strain": "strain=JCM 15754",
                "accession": "GCA_000614025.1",
                "taxid": 596085,
                "species_taxid": 596085,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0354,
                "matched_fragments": 57,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella disiens",
                "strain": "strain=NCTC11157",
                "accession": "GCA_900454955.1",
                "taxid": 28130,
                "species_taxid": 28130,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6323,
                "matched_fragments": 73,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella disiens",
                "strain": "strain=ATCC 29426",
                "accession": "GCA_000467875.1",
                "taxid": 28130,
                "species_taxid": 28130,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2901,
                "matched_fragments": 65,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella pleuritidis",
                "strain": "strain=JCM 14110",
                "accession": "GCA_000613725.1",
                "taxid": 407975,
                "species_taxid": 407975,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.202,
                "matched_fragments": 77,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella timonensis",
                "strain": "strain=DSM 22865",
                "accession": "GCA_000430565.1",
                "taxid": 386414,
                "species_taxid": 386414,
                "relation_to_type": "suspected-type",
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                "ani": 77.0706,
                "matched_fragments": 72,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella timonensis",
                "strain": "strain=4401737",
                "accession": "GCA_000455445.1",
                "taxid": 386414,
                "species_taxid": 386414,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0166,
                "matched_fragments": 75,
                "total_fragments": 954,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_000614205.1",
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                "matched_fragments": 950,
                "total_fragments": 954,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.90",
                "min_intra_species_ani": "96.70",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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            },
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            },
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                "accession": "GCF_000599605.1",
                "gtdb_species": "s__Prevotella sp000599605",
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            },
            {
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            },
            {
                "accession": "GCF_900290275.1",
                "gtdb_species": "s__Prevotella sp900290275",
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
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        "growth_tmp": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
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        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
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        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_genome_taxon": [
        "Hoylesella",
        "saccharolytica",
        "JCM",
        "17484"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}