# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_8	LOCUS_00050	sequence007:155..>662(-)	partial			WP_011254572.1	Fic family protein	98.8	47.3	86.7
MGA_10	LOCUS_00060	sequence009:1..691(+)	partial			WP_081133701.1	IS256-like element ISEfm2 family transposase	99.6	58.2	55.7
MGA_11	LOCUS_00070	sequence010:399..818(-)	frameshift		452	WP_148255728.1	IS5 family transposase	89.9	46.8	61.6
MGA_13	LOCUS_00080	sequence012:12..482(-)	frameshift		545,530,659	WP_156656235.1	IS5 family transposase	100.0	60.7	99.4
MGA_14	LOCUS_00090	sequence012:549..824(-)	frameshift		545,530,659	WP_103152732.1	IS5 family transposase	64.8	22.5	100.0
MGA_20	LOCUS_00120	sequence017:365..943(+)	frameshift		913,405	WP_165492900.1	IS3 family transposase	88.0	41.9	76.3
MGA_28	LOCUS_00150	sequence020:255..623(+)	partial			WP_000843587.1	type II toxin-antitoxin system RelE/ParE family toxin	61.5	65.5	41.3
MGA_33	LOCUS_00190	sequence022:63..377(-)	frameshift		421	WP_000191691.1	IS256-like element ISSag11 family transposase	97.1	25.6	51.5
MGA_34	LOCUS_00200	sequence022:837..1244(-)	frameshift		845	WP_002326711.1	IS256-like element ISEf1 family transposase	98.5	33.9	56.4
MGA_39	LOCUS_00230	sequence026:1..744(+)	internal_stop_codon	742..744(+)		WP_117118503.1	IS3 family transposase	93.9	53.6	63.4
MGA_40	LOCUS_00240	sequence026:772..1440(+)	internal_stop_codon	742..744(+)		WP_154549573.1	IS3 family transposase	97.7	51.7	70.5
MGA_41	LOCUS_00250	sequence027:277..528(+)	frameshift		504	WP_164925488.1	IS110 family transposase	90.4	17.4	50.7
MGA_42	LOCUS_00260	sequence027:543..1490(+)	frameshift		501	WP_003549893.1	IS110 family transposase	100.0	77.7	49.4
MGA_50	LOCUS_00300	sequence029:1131..1565(-)	frameshift		1632	WP_003549794.1	DeoR/GlpR family DNA-binding transcription regulator	100.0	57.4	84.7
MGA_51	LOCUS_00310	sequence029:1600..1884(-)	frameshift		1632	WP_003549794.1	DeoR/GlpR family DNA-binding transcription regulator	88.3	33.1	91.6
MGA_57	LOCUS_00360	sequence032:1..1056(+)	partial			WP_011476585.1	RNA-guided endonuclease TnpB family protein	78.6	64.2	58.3
MGA_62	LOCUS_00390	sequence034:531..677(+)	internal_stop_codon	507..509(+),675..677(+)		WP_003641171.1	acyltransferase family protein	100.0	7.8	89.6
MGA_65	LOCUS_00420	sequence034:1266..1478(-)	partial			WP_011476216.1	DNA primase family protein	78.6	10.5	50.9
MGA_66	LOCUS_00430	sequence034:1659..1886(-)	partial			WP_011254604.1	RNA-guided endonuclease TnpB family protein	93.3	23.6	58.6
MGA_72	LOCUS_00480	sequence037:14..1408(-)	internal_stop_codon	1526..1528(-)		WP_003547891.1	oligopeptide ABC transporter substrate-binding protein	99.8	79.1	50.0
MGA_73	LOCUS_00490	sequence037:1526..1771(-)	internal_stop_codon	1526..1528(-)		WP_003547891.1	oligopeptide ABC transporter substrate-binding protein	84.0	12.1	45.1
MGA_77	LOCUS_00520	sequence038:1055..1633(+)	partial			WP_003644407.1	lipoprotein	94.8	63.6	44.9
MGA_78	LOCUS_00530	sequence038:1686..1943(+)	internal_stop_codon	1941..1943(+)		WP_003129491.1	Ohr family peroxiredoxin	98.8	62.0	68.2
MGA_87	LOCUS_00610	sequence041:1323..2030(-)	partial			WP_009889235.1	ribonuclease H family protein	66.4	78.4	38.9
MGA_95	LOCUS_00680	sequence043:2044..2301(+)	frameshift		2262	WP_011241736.1	Asp23/Gls24 family envelope stress response protein	88.2	41.7	96.0
MGA_96	LOCUS_00690	sequence043:2279..2587(+)	frameshift		2262	WP_011241736.1	Asp23/Gls24 family envelope stress response protein	100.0	56.7	88.2
MGA_97	LOCUS_00700	sequence043:2602..2763(+)	frameshift		2736	WP_003680323.1	GlsB/YeaQ/YmgE family stress response membrane protein	88.7	56.6	85.1
MGA_105	LOCUS_00730	sequence045:2145..2537(-)	frameshift		2765,2639	WP_010905481.1	restriction endonuclease subunit S	100.0	31.9	56.9
MGA_106	LOCUS_00740	sequence045:2754..3068(-)	frameshift		2777,3030	WP_011476039.1	restriction endonuclease subunit S	84.6	23.7	48.9
MGA_114	LOCUS_00800	sequence047:2785..>3531(-)	partial			WP_011254604.1	RNA-guided endonuclease TnpB family protein	89.5	74.7	73.9
MGA_122	LOCUS_00870	sequence049:2948..3172(+)	frameshift		3130	WP_003642615.1	N-acetyltransferase GCN5	79.7	33.9	50.8
MGA_123	LOCUS_00880	sequence049:3126..3467(+)	frameshift		3136	WP_011254447.1	GNAT family N-acetyltransferase	98.2	64.7	49.5
MGA_126	LOCUS_00890	sequence050:137..880(-)	frameshift		148	WP_011674363.1	alpha-galactosidase	98.0	31.7	56.6
MGA_127	LOCUS_00900	sequence050:781..1929(-)	partial			WP_003641781.1	sucrose-specific PTS transporter subunit IIBC	88.2	51.0	35.6
MGA_132	LOCUS_00940	sequence051:209..523(-)	frameshift		509	WP_011241732.1	recombinase family protein	85.6	46.3	55.1
MGA_133	LOCUS_00950	sequence051:453..803(-)	frameshift		509	WP_011222018.1	recombinase family protein	81.0	51.1	59.6
MGA_138	LOCUS_00990	sequence052:1645..1938(-)	frameshift		2021	WP_003548514.1	methionine adenosyltransferase	100.0	24.3	91.8
MGA_139	LOCUS_01000	sequence052:1875..2843(-)	frameshift		2021	WP_003548514.1	methionine adenosyltransferase	85.1	68.7	93.1
MGA_149	LOCUS_01090	sequence054:1770..2111(+)	frameshift		2096	WP_000673890.1	MFS transporter	93.8	26.2	25.2
MGA_155	LOCUS_01150	sequence055:1430..2119(+)	partial			WP_003546245.1	SLAP domain-containing protein	99.6	45.9	47.6
MGA_158	LOCUS_01180	sequence055:3906..4172(+)	frameshift		4142	WP_014565478.1	SLAP domain-containing protein	62.5	14.6	47.3
MGA_159	LOCUS_01190	sequence055:4223..4354(+)	frameshift		4148	WP_003546245.1	SLAP domain-containing protein	90.7	7.8	66.7
MGA_160	LOCUS_01200	sequence056:11..700(-)	partial			WP_011674809.1	IS30 family transposase	99.6	69.6	52.4
MGA_162	LOCUS_01220	sequence056:2113..2553(-)	frameshift		2648	WP_010867495.1	ATP-binding cassette domain-containing protein	69.2	37.1	46.2
MGA_163	LOCUS_01230	sequence056:2544..2954(-)	frameshift		2648,2429	WP_011241771.1	ABC transporter ATP-binding protein	75.0	55.1	100.0
MGA_165	LOCUS_01250	sequence056:3721..4140(-)	frameshift		4217	WP_003648228.1	hypothetical protein	100.0	69.5	89.2
MGA_166	LOCUS_01260	sequence057:82..942(-)	frameshift		1152,936	WP_003549489.1	BMP family protein	99.3	78.7	84.9
MGA_167	LOCUS_01270	sequence057:1522..1833(+)	frameshift		1411	WP_011254521.1	nucleoside 2-deoxyribosyltransferase	100.0	61.7	71.8
MGA_168	LOCUS_01280	sequence057:1882..2874(-)	frameshift		2882	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	98.2	73.2	75.3
MGA_169	LOCUS_01290	sequence057:2880..3218(-)	frameshift		2882	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	100.0	25.0	64.3
MGA_170	LOCUS_01300	sequence057:3507..3998(+)	frameshift		3959	WP_165492900.1	IS3 family transposase	60.1	24.8	71.0
MGA_175	LOCUS_01350	sequence058:2064..2273(+)	internal_stop_codon	2271..2273(+)		WP_011254281.1	PTS sugar transporter subunit IIC	100.0	14.5	78.3
MGA_176	LOCUS_01360	sequence058:2313..3485(+)	internal_stop_codon	2271..2273(+)		WP_011254281.1	PTS sugar transporter subunit IIC	99.2	81.3	77.5
MGA_178	LOCUS_01380	sequence058:4367..4900(+)	frameshift		4822	WP_003546937.1	family 1 glycosylhydrolase	87.0	32.3	89.9
MGA_189	LOCUS_01460	sequence060:1713..1931(+)	internal_stop_codon	1659..1661(+)		WP_011254160.1	LysR family transcriptional regulator	86.1	21.2	67.7
MGA_194	LOCUS_01510	sequence061:206..358(-)	frameshift		226	WP_015613346.1	ROK family protein	86.0	15.0	79.1
MGA_196	LOCUS_01530	sequence061:1046..1486(+)	frameshift,internal_stop_codon	1611..1613(+)	1483,1628	WP_011254283.1	DUF4767 domain-containing protein	65.8	48.5	58.3
MGA_199	LOCUS_01560	sequence061:4409..5164(-)	partial			WP_003546978.1	amino acid permease	99.6	54.0	85.6
MGA_203	LOCUS_01600	sequence062:4205..4633(-)	frameshift		4808,4676	WP_003596308.1	IS30 family transposase	93.7	39.3	69.2
MGA_206	LOCUS_01620	sequence063:247..612(+)	frameshift,internal_stop_codon	173..175(+)	145,565	WP_003640478.1	MetQ/NlpA family ABC transporter substrate-binding protein	93.4	39.6	69.9
MGA_207	LOCUS_01630	sequence063:780..1070(+)	internal_stop_codon	1068..1070(+),1071..1073(+)		WP_013097651.1	(S)-acetoin forming diacetyl reductase	93.8	35.2	56.7
MGA_208	LOCUS_01640	sequence063:1080..1433(+)	frameshift,internal_stop_codon	1068..1070(+),1071..1073(+)	1403	WP_015366942.1	(S)-acetoin forming diacetyl reductase	85.5	39.1	48.0
MGA_212	LOCUS_01680	sequence063:5492..5761(-)	partial			WP_003546398.1	bacteriocin immunity protein	96.6	72.9	53.5
MGA_216	LOCUS_01710	sequence064:2638..3366(+)	frameshift		2542	WP_011101571.1	restriction endonuclease	100.0	80.4	57.2
MGA_218	LOCUS_01730	sequence064:4356..4670(+)	internal_stop_codon	4668..4670(+)		WP_011476042.1	type I restriction-modification system subunit M	91.3	18.0	60.0
MGA_219	LOCUS_01740	sequence064:4716..5990(+)	internal_stop_codon	4668..4670(+)		WP_011476042.1	type I restriction-modification system subunit M	99.5	79.0	67.5
MGA_230	LOCUS_01830	sequence065:5742..6383(+)	partial			WP_011254327.1	amidohydrolase family protein	97.7	68.4	65.9
MGA_245	LOCUS_01960	sequence067:1030..1308(-)	frameshift		1058,1319	WP_003549809.1	L-lactate permease	95.7	17.5	95.5
MGA_246	LOCUS_01970	sequence067:1317..1685(-)	frameshift,internal_stop_codon	1707..1709(-)	1058,1319	WP_003549809.1	L-lactate permease	96.7	23.4	79.7
MGA_247	LOCUS_01980	sequence067:1707..2435(-)	internal_stop_codon	1707..1709(-)		WP_003549809.1	L-lactate permease	100.0	48.0	81.0
MGA_250	LOCUS_02010	sequence067:4171..4758(-)	frameshift		4784	WP_011254571.1	zinc ABC transporter substrate-binding protein	100.0	65.1	80.5
MGA_251	LOCUS_02020	sequence067:4755..5069(-)	frameshift		4784	WP_011254571.1	zinc ABC transporter substrate-binding protein	91.3	31.9	63.2
MGA_253	LOCUS_02040	sequence067:5783..6697(-)	frameshift		6699	WP_003549797.1	fructose-specific PTS transporter subunit EIIC	100.0	45.7	94.4
MGA_254	LOCUS_02050	sequence067:6640..>7446(-)	frameshift		6699	WP_003549797.1	fructose-specific PTS transporter subunit EIIC	92.9	37.4	87.1
MGA_255	LOCUS_02060	sequence068:375..5876(+)	partial			WP_012775524.1	SNF2-related protein	93.2	73.6	45.9
MGA_264	LOCUS_02150	sequence069:4785..5252(+)	partial			WP_003549663.1	aggregation promoting protein	49.0	63.3	75.0
MGA_282	LOCUS_02330	sequence071:3454..3879(-)	frameshift,internal_stop_codon	3171..3173(-)	3468	WP_003561810.1	IS30-like element ISLpl1 family transposase	92.9	42.1	41.2
MGA_283	LOCUS_02340	sequence071:3943..4800(-)	partial			WP_002287934.1	IS30 family transposase	89.5	67.5	29.0
MGA_293	LOCUS_02440	sequence072:6416..7306(+)	frameshift		7183	WP_003550136.1	ribonuclease R	87.8	33.2	90.4
MGA_294	LOCUS_02450	sequence072:7450..8757(+)	frameshift		7183	WP_003550136.1	ribonuclease R	88.7	49.4	90.2
MGA_299	LOCUS_02490	sequence073:4161..6233(-)	partial			WP_010980351.1	HesA/MoeB/ThiF family protein	16.5	38.3	33.9
MGA_309	LOCUS_02590	sequence074:7735..8532(-)	partial			WP_011267049.1	tyrosine-type recombinase/integrase	87.9	73.8	30.4
MGA_317	LOCUS_02660	sequence075:3838..4782(+)	partial			WP_003547408.1	DNA/RNA non-specific endonuclease	62.1	69.4	69.2
MGA_330	LOCUS_02790	sequence076:9971..10327(+)	partial			WP_012775462.1	helix-turn-helix transcriptional regulator	75.4	72.3	46.1
MGA_331	LOCUS_02800	sequence076:10337..11065(+)	partial			WP_011102080.1	DUF4097 domain-containing protein	52.9	47.9	27.8
MGA_341	LOCUS_02900	sequence077:7373..7903(+)	frameshift		7879	WP_003549596.1	hypothetical protein	98.9	81.7	51.7
MGA_351	LOCUS_03000	sequence078:4835..5245(+)	frameshift		5230	WP_003549293.1	ECF transporter S component	98.5	77.0	85.8
MGA_355	LOCUS_03040	sequence078:8326..9096(-)	partial			WP_011254010.1	C69 family dipeptidase	100.0	54.9	81.6
MGA_356	LOCUS_03050	sequence078:9068..9574(-)	partial			WP_011254010.1	C69 family dipeptidase	95.8	34.5	92.5
MGA_365	LOCUS_03140	sequence079:2606..3313(-)	partial			WP_011101674.1	C40 family peptidase	58.7	29.6	51.7
MGA_375	LOCUS_03240	sequence080:16..1260(-)	partial			WP_000889012.1	DUF3883 domain-containing protein	81.4	74.0	28.1
MGA_382	LOCUS_03310	sequence080:8633..10432(-)	partial			WP_011070743.1	type I restriction-modification system subunit M	41.1	42.0	35.1
MGA_383	LOCUS_03320	sequence080:10549..12000(-)	partial			WP_003598265.1	zinc-ribbon domain-containing protein	60.0	65.0	22.8
MGA_389	LOCUS_03380	sequence081:2835..4904(-)	partial			WP_003547741.1	mucus-binding protein	74.5	64.4	26.0
MGA_396	LOCUS_03450	sequence081:7912..9162(-)	frameshift		9185	WP_011254361.1	PBP1A family penicillin-binding protein	73.3	39.3	69.8
MGA_397	LOCUS_03460	sequence081:9141..10415(-)	frameshift		9185	WP_011254361.1	PBP1A family penicillin-binding protein	73.6	40.3	61.3
MGA_402	LOCUS_03510	sequence082:5060..7342(-)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	49.3	42.8	28.8
MGA_415	LOCUS_03630	sequence083:4124..4582(-)	frameshift,internal_stop_codon	4124..4126(-)	4661,4695	WP_007054687.1	DUF4143 domain-containing protein	94.1	31.1	28.5
MGA_417	LOCUS_03650	sequence083:4850..5272(-)	partial			WP_013611293.1	DUF4143 domain-containing protein	77.9	26.7	38.9
MGA_418	LOCUS_03660	sequence083:5456..6253(-)	frameshift		6273	WP_011254583.1	glycoside hydrolase family 31 protein	99.2	34.4	79.9
MGA_419	LOCUS_03670	sequence083:6256..7758(-)	frameshift		6273	WP_011254583.1	glycoside hydrolase family 31 protein	99.0	64.4	84.0
MGA_423	LOCUS_03710	sequence083:8923..10179(-)	partial			WP_003549857.1	BspA family leucine-rich repeat surface protein	59.6	18.3	31.4
MGA_424	LOCUS_03720	sequence083:10189..12123(-)	partial			WP_011102047.1	MBG domain-containing protein	59.6	19.9	24.6
MGA_430	LOCUS_03770	sequence084:3425..3946(+)	partial			WP_062281570.1	ECF transporter S component	95.4	66.7	48.5
MGA_437	LOCUS_03840	sequence084:7770..7946(-)	partial			WP_004521540.1	heme-binding protein	74.1	29.5	54.5
MGA_444	LOCUS_03910	sequence085:2942..4096(+)	frameshift		4090	WP_003548899.1	HD domain-containing protein	99.7	84.4	90.1
MGA_446	LOCUS_03930	sequence085:4643..4882(-)	frameshift		4884	WP_011254084.1	ROK family protein	79.7	20.9	85.7
MGA_447	LOCUS_03940	sequence085:4879..5559(-)	frameshift		4884	WP_011254084.1	ROK family protein	100.0	74.5	73.9
MGA_448	LOCUS_03950	sequence085:5625..5981(-)	frameshift		5998	WP_011254080.1	ribose-phosphate diphosphokinase	100.0	36.4	94.9
MGA_449	LOCUS_03960	sequence085:5978..6598(-)	frameshift		5998	WP_011254080.1	ribose-phosphate diphosphokinase	97.1	61.7	96.0
MGA_452	LOCUS_03990	sequence085:9535..10020(-)	frameshift		10028,10070	WP_080542561.1	SLAP domain-containing protein	97.5	73.5	53.5
MGA_453	LOCUS_04000	sequence085:10017..10295(-)	partial			WP_003548795.1	beta-N-acetylglucosaminidase AcmB	71.7	16.4	44.8
MGA_459	LOCUS_04060	sequence086:949..2541(+)	frameshift		2472,2469,2478	WP_146462232.1	zinc-ribbon domain-containing protein	54.5	45.3	26.3
MGA_463	LOCUS_04100	sequence086:5382..6038(+)	frameshift		5972	WP_001071181.1	SNF2-related protein	89.4	8.3	57.9
MGA_464	LOCUS_04110	sequence086:6035..8818(+)	frameshift,internal_stop_codon	8817..8819(+)	5972	WP_012775524.1	SNF2-related protein	100.0	39.7	42.8
MGA_465	LOCUS_04120	sequence086:8969..10909(+)	internal_stop_codon	8816..8818(+)		WP_012775524.1	SNF2-related protein	80.3	22.3	46.1
MGA_473	LOCUS_04200	sequence087:4149..4679(-)	frameshift		4663	WP_003546183.1	tyrosine-type recombinase/integrase	93.2	41.0	43.9
MGA_482	LOCUS_04290	sequence087:9805..13107(-)	frameshift		13136,13287	WP_011202675.1	DEAD/DEAH box helicase family protein	99.6	70.1	41.7
MGA_483	LOCUS_04300	sequence087:13104..13298(-)	frameshift		13139,13287	WP_011102960.1	DEAD/DEAH box helicase family protein	90.6	3.5	54.2
MGA_484	LOCUS_04310	sequence087:13276..14523(-)	frameshift		13136,13287	WP_011202675.1	DEAD/DEAH box helicase family protein	98.8	25.8	38.4
MGA_494	LOCUS_04410	sequence088:6290..6760(+)	frameshift		6697	WP_011101502.1	acetyl-CoA carboxylase biotin carboxylase subunit	85.9	29.0	73.9
MGA_495	LOCUS_04420	sequence088:6757..7668(+)	frameshift		6697	WP_011101502.1	acetyl-CoA carboxylase biotin carboxylase subunit	96.0	63.0	61.5
MGA_498	LOCUS_04450	sequence088:9506..10018(+)	frameshift		10003	WP_003645117.1	enoyl-ACP reductase FabI	97.6	65.9	71.7
MGA_499	LOCUS_04460	sequence088:10048..10263(+)	frameshift		10006	WP_011475769.1	enoyl-ACP reductase FabI	100.0	28.2	74.6
MGA_500	LOCUS_04470	sequence088:10475..11299(+)	frameshift		10412	WP_003644005.1	biotin--[acetyl-CoA-carboxylase] ligase	99.6	83.3	41.5
MGA_501	LOCUS_04480	sequence088:11373..11714(+)	internal_stop_codon	11712..11714(+)		WP_004255224.1	biotin transporter BioY	92.0	55.0	46.2
MGA_503	LOCUS_04500	sequence088:12675..13259(+)	partial			WP_003577841.1	ISL3 family transposase	100.0	47.3	57.7
MGA_509	LOCUS_04560	sequence089:3765..4049(+)	frameshift		4043	WP_003549864.1	Wzz/FepE/Etk N-terminal domain-containing protein	97.9	31.3	77.2
MGA_510	LOCUS_04570	sequence089:4046..4651(+)	frameshift		4043	WP_003549864.1	Wzz/FepE/Etk N-terminal domain-containing protein	100.0	68.0	66.2
MGA_512	LOCUS_04590	sequence089:5448..5963(+)	internal_stop_codon	5961..5963(+)		WP_003549867.1	exopolysaccharide biosynthesis protein	100.0	66.8	83.6
MGA_513	LOCUS_04600	sequence089:5988..6218(+)	internal_stop_codon	5961..5963(+)		WP_003549867.1	exopolysaccharide biosynthesis protein	100.0	29.7	81.6
MGA_517	LOCUS_04640	sequence089:7967..8992(+)	partial			WP_000998260.1	glycosyltransferase	67.2	32.3	32.6
MGA_519	LOCUS_04660	sequence089:9208..9519(+)	partial			WP_011026968.1	sugar O-acetyltransferase	80.6	47.4	45.8
MGA_520	LOCUS_04670	sequence089:9541..10260(+)	partial			WP_002294234.1	chorismate mutase	56.9	47.1	28.5
MGA_523	LOCUS_04700	sequence089:12372..13373(+)	partial			WP_011201897.1	glycosyltransferase family 2 protein	65.8	59.8	33.2
MGA_527	LOCUS_04740	sequence089:16786..17085(-)	frameshift		17093	WP_003646390.1	glycerol-3-phosphate cytidylyltransferase	98.0	73.9	68.7
MGA_530	LOCUS_04760	sequence090:1999..3447(+)	frameshift		3444	WP_003549932.1	glucose PTS transporter subunit IIA	98.1	71.0	81.4
MGA_531	LOCUS_04770	sequence090:3440..3916(+)	frameshift		3444	WP_003549932.1	glucose PTS transporter subunit IIA	96.8	23.1	54.9
MGA_534	LOCUS_04800	sequence090:6136..6897(+)	frameshift		6888	WP_002289252.1	PTS transporter subunit EIIC	96.4	49.0	69.4
MGA_535	LOCUS_04810	sequence090:6881..8206(+)	frameshift		6888	WP_002289252.1	PTS transporter subunit EIIC	58.0	50.4	65.6
MGA_537	LOCUS_04830	sequence090:9692..11005(-)	frameshift		11037	WP_012775266.1	bifunctional metallophosphatase/5'-nucleotidase	98.9	61.3	44.0
MGA_538	LOCUS_04840	sequence090:10966..11565(-)	frameshift		11040	WP_010922164.1	bifunctional metallophosphatase/5'-nucleotidase	56.8	16.9	57.5
MGA_540	LOCUS_04860	sequence090:13737..14225(+)	internal_stop_codon	14223..14225(+)		WP_188891678.1	amidohydrolase family protein	100.0	40.4	89.5
MGA_541	LOCUS_04870	sequence090:14289..14942(+)	internal_stop_codon	14223..14225(+)		WP_188891678.1	amidohydrolase family protein	100.0	54.1	91.7
MGA_549	LOCUS_04930	sequence091:2932..3369(+)	partial			WP_003548787.1	hypothetical protein	35.2	47.0	52.9
MGA_560	LOCUS_05040	sequence091:15402..16154(-)	frameshift		16159	WP_048065536.1	plasma-membrane proton-efflux P-type ATPase	96.4	28.4	37.8
MGA_561	LOCUS_05050	sequence091:16151..17167(-)	frameshift,internal_stop_codon	17186..17188(-)	16162	WP_064496762.1	plasma-membrane proton-efflux P-type ATPase	99.1	41.2	47.5
MGA_562	LOCUS_05060	sequence091:17158..17658(-)	partial			WP_011241729.1	replication initiator protein A	91.0	41.4	53.3
MGA_572	LOCUS_05150	sequence092:8900..9976(+)	frameshift		9964	WP_003546143.1	phosphoenolpyruvate carboxykinase (ATP)	99.2	64.3	93.8
MGA_573	LOCUS_05160	sequence092:10015..10557(+)	frameshift		9964	WP_003546143.1	phosphoenolpyruvate carboxykinase (ATP)	100.0	32.6	95.0
MGA_576	LOCUS_05190	sequence092:11700..12092(-)	frameshift,internal_stop_codon	12119..12121(-),12116..12118(-),11699..11701(-)	11650,12127	WP_011254162.1	acetate kinase	98.5	32.2	83.6
MGA_577	LOCUS_05200	sequence092:12095..12514(-)	frameshift,internal_stop_codon	12118..12120(-),12115..12117(-)	12552,12126	WP_011254162.1	acetate kinase	99.3	34.8	82.6
MGA_578	LOCUS_05210	sequence092:12520..12714(-)	frameshift		12552	WP_011254162.1	acetate kinase	87.5	14.1	69.6
MGA_585	LOCUS_05260	sequence093:1222..2151(-)	internal_stop_codon	2173..2175(-)		WP_011836594.1	SEC10/PgrA surface exclusion domain-containing protein	79.0	27.6	26.5
MGA_592	LOCUS_05330	sequence093:9769..10557(-)	frameshift		10553	WP_013853658.1	FAD-dependent oxidoreductase	99.6	64.8	100.0
MGA_593	LOCUS_05340	sequence093:10479..10979(-)	frameshift		10553	WP_013853658.1	FAD-dependent oxidoreductase	85.5	35.2	100.0
MGA_597	LOCUS_05380	sequence093:14699..15073(-)	frameshift		15084	WP_002378477.1	thiol reductant ABC exporter subunit CydD	96.8	20.8	70.0
MGA_598	LOCUS_05390	sequence093:15082..16413(-)	frameshift		15087	WP_000884540.1	thiol reductant ABC exporter subunit CydD	100.0	77.8	51.0
MGA_610	LOCUS_05510	sequence094:10117..11454(-)	frameshift		11549	WP_011254634.1	peptide ABC transporter substrate-binding protein	99.3	81.7	64.6
MGA_611	LOCUS_05520	sequence094:11532..11738(-)	frameshift		11549	WP_011254634.1	peptide ABC transporter substrate-binding protein	88.2	11.1	57.4
MGA_613	LOCUS_05540	sequence094:12926..15529(+)	partial			WP_010891879.1	Eco57I restriction-modification methylase domain-containing protein	83.7	63.7	24.4
MGA_614	LOCUS_05550	sequence094:15542..17569(+)	partial			WP_001100037.1	SNF2-related protein	34.8	41.1	27.8
MGA_615	LOCUS_05560	sequence094:17675..18970(+)	internal_stop_codon	17567..17569(+)		WP_000401853.1	helicase-related protein	34.3	13.8	34.0
MGA_619	LOCUS_05600	sequence095:737..952(-)	frameshift		932,1028	WP_057799316.1	S-ribosylhomocysteine lyase	90.1	40.8	84.4
MGA_620	LOCUS_05610	sequence095:954..1211(-)	frameshift		932,1028	WP_057799316.1	S-ribosylhomocysteine lyase	72.9	39.5	90.3
MGA_621	LOCUS_05620	sequence095:1274..1960(-)	frameshift		2211	WP_011102105.1	vitamin B12 independent methionine synthase	99.6	60.2	67.0
MGA_622	LOCUS_05630	sequence095:2200..2373(-)	frameshift		2211	WP_005812397.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	86.0	12.9	65.3
MGA_625	LOCUS_05660	sequence095:3716..3949(+)	partial			WP_003549730.1	bacteriocin immunity protein	83.1	70.3	60.9
MGA_636	LOCUS_05770	sequence095:13681..14046(-)	frameshift		13698	WP_003549835.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	95.9	78.4	87.1
MGA_638	LOCUS_05790	sequence095:14893..15312(-)	frameshift		15332	WP_003549839.1	O-antigen ligase family protein	98.6	27.2	81.0
MGA_639	LOCUS_05800	sequence095:15318..16442(-)	frameshift		15332	WP_003549839.1	O-antigen ligase family protein	95.5	71.0	80.1
MGA_643	LOCUS_05840	sequence095:18371..18799(+)	internal_stop_codon	18797..18799(+)		WP_011068591.1	ATP-binding protein	100.0	30.2	45.1
MGA_644	LOCUS_05850	sequence095:18800..19537(+)	frameshift,internal_stop_codon	18797..18799(+)	19513	WP_008783193.1	ATP-binding protein	94.3	50.4	39.7
MGA_647	LOCUS_05880	sequence095:20882..21268(+)	frameshift,internal_stop_codon	21209..21211(+)	21205	WP_003549855.1	C40 family peptidase	99.2	42.5	74.8
MGA_648	LOCUS_05890	sequence095:21277..21852(+)	frameshift,internal_stop_codon	21209..21211(+)	21205	WP_003549855.1	C40 family peptidase	74.9	48.8	77.4
MGA_665	LOCUS_06060	sequence096:15213..15539(-)	frameshift		15574	WP_003546921.1	6-phospho-beta-glucosidase	99.1	22.2	92.5
MGA_666	LOCUS_06070	sequence096:15527..16714(-)	frameshift,internal_stop_codon	15578..15580(-)	15583	WP_003546921.1	6-phospho-beta-glucosidase	90.4	73.0	92.4
MGA_668	LOCUS_06090	sequence096:17784..18464(+)	frameshift		18419	WP_010965834.1	FAD-binding oxidoreductase	92.5	45.0	47.6
MGA_669	LOCUS_06100	sequence096:18422..19186(+)	frameshift		18419	WP_011948690.1	FAD-binding oxidoreductase	98.4	53.8	39.8
MGA_679	LOCUS_06200	sequence097:6331..6921(-)	frameshift		6962	WP_011254586.1	ABC transporter ATP-binding protein	100.0	34.0	93.9
MGA_680	LOCUS_06210	sequence097:6918..8054(-)	frameshift		6962	WP_011254586.1	ABC transporter ATP-binding protein	97.9	64.2	88.9
MGA_695	LOCUS_06360	sequence097:18508..19470(+)	frameshift		19452	WP_003549685.1	C69 family dipeptidase	100.0	68.3	86.0
MGA_696	LOCUS_06370	sequence097:19515..19931(+)	frameshift		19467	WP_003549685.1	C69 family dipeptidase	100.0	29.4	83.3
MGA_698	LOCUS_06390	sequence097:20648..21148(-)	frameshift		21278,21254	WP_011254591.1	ABC transporter permease	100.0	47.0	74.1
MGA_699	LOCUS_06400	sequence097:21270..21707(-)	frameshift		21278,21254	WP_011254591.1	ABC transporter permease	97.9	40.2	73.9
MGA_703	LOCUS_06440	sequence097:23786..24157(-)	frameshift		24257	WP_011254594.1	peroxide stress protein YaaA	99.2	48.2	75.4
MGA_704	LOCUS_06450	sequence097:24195..24548(-)	frameshift		24257	WP_011254594.1	peroxide stress protein YaaA	82.9	38.3	82.5
MGA_707	LOCUS_06480	sequence098:1831..2016(-)	frameshift		2042	WP_011254013.1	tryptophan ABC transporter substrate-binding protein	100.0	18.5	85.2
MGA_708	LOCUS_06490	sequence098:2004..2825(-)	frameshift		2042	WP_011254013.1	tryptophan ABC transporter substrate-binding protein	97.4	80.6	82.7
MGA_709	LOCUS_06500	sequence098:3174..3500(+)	frameshift,internal_stop_codon	3561..3563(+)	3479	WP_025079808.1	YjjG family noncanonical pyrimidine nucleotidase	98.1	45.1	84.9
MGA_710	LOCUS_06510	sequence098:3587..3880(+)	frameshift,internal_stop_codon	3561..3563(+)	3479	WP_025079808.1	YjjG family noncanonical pyrimidine nucleotidase	100.0	41.3	90.7
MGA_716	LOCUS_06570	sequence098:9976..11244(-)	frameshift		11213	WP_011254599.1	ABC transporter ATP-binding protein	97.6	70.2	86.2
MGA_717	LOCUS_06580	sequence098:11199..11738(-)	frameshift		11213	WP_011254599.1	ABC transporter ATP-binding protein	88.3	26.9	88.0
MGA_720	LOCUS_06610	sequence098:14079..16871(+)	partial			WP_003548485.1	mucus-binding protein	48.9	70.8	37.5
MGA_723	LOCUS_06640	sequence098:18511..19101(+)	frameshift		19017	WP_003549250.1	amino acid permease	98.5	40.6	84.1
MGA_724	LOCUS_06650	sequence098:19091..19546(+)	frameshift		19537,19498,19020	WP_003549250.1	amino acid permease	89.4	28.1	91.9
MGA_725	LOCUS_06660	sequence098:19551..19952(+)	frameshift		19537,19498	WP_003549250.1	amino acid permease	100.0	27.7	82.7
MGA_746	LOCUS_06860	sequence099:17409..17681(+)	partial			WP_002399993.1	hypothetical protein	93.3	47.8	44.0
MGA_751	LOCUS_06910	sequence099:21231..22766(-)	partial			WP_011476612.1	ArdC-like ssDNA-binding domain-containing protein	47.6	22.0	28.8
MGA_755	LOCUS_06950	sequence100:298..567(-)	frameshift		574	WP_003547298.1	GNAT family N-acetyltransferase	100.0	50.3	67.4
MGA_756	LOCUS_06960	sequence100:542..817(-)	frameshift		574	WP_003547298.1	GNAT family N-acetyltransferase	89.0	46.3	47.0
MGA_759	LOCUS_06990	sequence100:2958..3308(-)	frameshift		3358	WP_003548184.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	18.5	91.4
MGA_760	LOCUS_07000	sequence100:3338..4843(-)	frameshift		3358	WP_003548184.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	99.6	79.5	76.0
MGA_767	LOCUS_07070	sequence100:14139..14747(+)	partial			WP_011254405.1	cell division protein	95.5	33.3	45.9
MGA_769	LOCUS_07090	sequence100:15941..16999(+)	frameshift		16957	WP_003643065.1	glycoside-pentoside-hexuronide (GPH):cation symporter	96.9	53.1	53.0
MGA_770	LOCUS_07100	sequence100:16996..17856(+)	frameshift		16957	WP_003643065.1	glycoside-pentoside-hexuronide (GPH):cation symporter	96.9	43.3	51.4
MGA_772	LOCUS_07120	sequence100:20078..21286(+)	frameshift		21253	WP_011254462.1	sucrose phosphorylase	97.5	81.7	87.8
MGA_773	LOCUS_07130	sequence100:21300..21521(+)	frameshift		21253	WP_011836859.1	sucrose phosphorylase	100.0	15.2	42.5
MGA_778	LOCUS_07180	sequence100:25490..25822(+)	frameshift		25804	WP_003548115.1	OsmC family protein	97.3	79.3	71.0
MGA_783	LOCUS_07210	sequence101:1624..2373(+)	partial			WP_003549671.1	L,D-transpeptidase family protein	87.1	54.0	72.4
MGA_784	LOCUS_07220	sequence101:2319..2666(+)	partial			WP_003549671.1	L,D-transpeptidase family protein	100.0	28.6	92.2
MGA_787	LOCUS_07250	sequence101:3690..3932(-)	frameshift		3937	WP_021721270.1	LytTR family DNA-binding domain-containing protein	98.8	52.3	73.4
MGA_788	LOCUS_07260	sequence101:3899..4132(-)	frameshift		3937	WP_021721270.1	LytTR family DNA-binding domain-containing protein	97.4	49.7	53.3
MGA_797	LOCUS_07350	sequence101:13526..14224(-)	frameshift		14283	WP_003549632.1	sugar ABC transporter permease	100.0	51.3	94.0
MGA_798	LOCUS_07360	sequence101:14269..14883(-)	frameshift		14283	WP_003549632.1	sugar ABC transporter permease	99.0	44.7	87.1
MGA_803	LOCUS_07410	sequence101:20489..21685(-)	frameshift		21777	WP_003549626.1	glycoside hydrolase family 13 protein	99.7	69.3	87.7
MGA_804	LOCUS_07420	sequence101:21670..22212(-)	frameshift		21777	WP_003549626.1	glycoside hydrolase family 13 protein	80.6	25.3	80.0
MGA_806	LOCUS_07440	sequence101:24051..24752(-)	frameshift		24052,24757	WP_011254602.1	acetate kinase	100.0	59.6	82.0
MGA_807	LOCUS_07450	sequence101:24740..25168(-)	frameshift		24757	WP_011254602.1	acetate kinase	96.5	34.8	74.5
MGA_816	LOCUS_07540	sequence101:32625..33257(+)	partial			WP_003130354.1	hypothetical protein	80.0	73.2	32.5
MGA_821	LOCUS_07580	sequence102:2558..2866(+)	partial			WP_061777522.1	hypothetical protein	100.0	40.3	95.1
MGA_827	LOCUS_07640	sequence102:6868..7101(+)	frameshift		6880	WP_011222043.1	hypothetical protein	98.7	67.0	73.7
MGA_845	LOCUS_07820	sequence102:24401..25615(-)	partial			WP_011084727.1	SIR2 family protein	47.0	47.2	32.7
MGA_847	LOCUS_07840	sequence102:26095..26223(+)	partial			WP_011241777.1	recombinase family protein	83.3	18.0	97.1
MGA_850	LOCUS_07870	sequence102:27625..30015(-)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	46.6	43.8	27.1
MGA_862	LOCUS_07980	sequence103:1686..2201(-)	frameshift		2209	WP_002984844.1	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	100.0	59.9	47.4
MGA_863	LOCUS_07990	sequence103:2192..2428(-)	frameshift		2209	WP_002365419.1	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	93.6	26.9	57.5
MGA_882	LOCUS_08180	sequence103:23991..24584(-)	frameshift		24688	WP_011476638.1	Fic family protein	100.0	75.4	48.7
MGA_885	LOCUS_08210	sequence103:27537..28127(-)	internal_stop_codon	28179..28181(-)		WP_154881464.1	peptide ABC transporter substrate-binding protein	99.5	36.3	73.5
MGA_886	LOCUS_08220	sequence103:28179..29162(-)	internal_stop_codon	28179..28181(-)		WP_154881464.1	peptide ABC transporter substrate-binding protein	100.0	60.2	72.5
MGA_888	LOCUS_08240	sequence103:29869..30402(-)	frameshift,internal_stop_codon	30472..30474(-)	29904	WP_003645241.1	aryl-sulfate sulfotransferase	97.7	29.7	43.5
MGA_893	LOCUS_08290	sequence103:32603..32818(+)	frameshift		32764	WP_200772684.1	putative quinol monooxygenase	78.9	49.6	55.4
MGA_895	LOCUS_08310	sequence103:34386..35063(+)	internal_stop_codon	34245..34247(+)		WP_011102053.1	FAD-dependent oxidoreductase	95.6	43.6	43.7
MGA_896	LOCUS_08320	sequence103:35711..35893(-)	frameshift,internal_stop_codon	35683..35685(-)	35695,35743	WP_015613391.1	DUF4160 domain-containing protein	83.3	51.5	76.0
MGA_902	LOCUS_08380	sequence104:3328..4032(-)	frameshift		4055	WP_003547186.1	serine hydrolase	100.0	64.8	86.0
MGA_903	LOCUS_08390	sequence104:4032..4484(-)	frameshift		4055	WP_003547186.1	serine hydrolase	83.3	34.1	75.2
MGA_908	LOCUS_08440	sequence104:7938..8180(-)	frameshift,internal_stop_codon	8278..8280(-)	8190,7943	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	98.8	17.0	39.2
MGA_909	LOCUS_08450	sequence104:8278..8781(-)	frameshift,internal_stop_codon	8278..8280(-)	8866,8175	WP_001057522.1	MDR family MFS transporter	94.0	32.0	25.5
MGA_910	LOCUS_08460	sequence104:8807..9187(-)	frameshift		8866	WP_011067926.1	MFS transporter	84.9	22.1	42.1
MGA_912	LOCUS_08480	sequence104:11053..11313(+)	frameshift		11307	WP_011254311.1	Trk family potassium uptake protein	98.8	19.1	84.7
MGA_913	LOCUS_08490	sequence104:11310..11780(+)	frameshift		11769,11307	WP_011254311.1	Trk family potassium uptake protein	88.5	30.9	83.3
MGA_914	LOCUS_08500	sequence104:11764..12387(+)	frameshift		11771	WP_011254311.1	Trk family potassium uptake protein	99.0	46.0	89.8
MGA_928	LOCUS_08640	sequence104:25958..27139(-)	frameshift		27162	WP_003547140.1	type I DNA topoisomerase	100.0	55.7	93.4
MGA_929	LOCUS_08650	sequence104:27148..27762(-)	frameshift		27161,27749	WP_003547140.1	type I DNA topoisomerase	96.6	27.9	87.3
MGA_930	LOCUS_08660	sequence104:27735..28088(-)	frameshift		27749	WP_003547140.1	type I DNA topoisomerase	83.8	13.9	98.0
MGA_937	LOCUS_08730	sequence104:33513..34040(+)	frameshift		34019	WP_011254304.1	hemolysin III family protein	96.6	76.5	89.3
MGA_941	LOCUS_08770	sequence105:1..849(+)	partial			WP_011476585.1	RNA-guided endonuclease TnpB family protein	99.3	65.2	57.5
MGA_967	LOCUS_09030	sequence105:27824..28069(+)	frameshift		28000	WP_003548773.1	asparagine synthase (glutamine-hydrolyzing)	72.8	9.1	94.9
MGA_968	LOCUS_09040	sequence105:28153..29772(+)	frameshift		28000	WP_003548773.1	asparagine synthase (glutamine-hydrolyzing)	100.0	83.1	96.8
MGA_970	LOCUS_09060	sequence105:31176..31937(+)	partial			WP_064496762.1	plasma-membrane proton-efflux P-type ATPase	83.0	26.2	58.1
MGA_971	LOCUS_09070	sequence105:32030..32437(+)	partial			WP_034537633.1	replication initiator protein A	98.5	35.8	85.0
MGA_976	LOCUS_09120	sequence105:34484..34762(+)	frameshift		34681	WP_011241757.1	MobQ family relaxase	81.5	10.9	82.7
MGA_977	LOCUS_09130	sequence105:34747..35385(+)	frameshift		35380,34678	WP_035454417.1	MobQ family relaxase	100.0	30.9	84.4
MGA_978	LOCUS_09140	sequence105:35400..35927(+)	frameshift		35382	WP_035454417.1	MobQ family relaxase	91.4	24.3	84.4
MGA_982	LOCUS_09180	sequence106:1311..1772(+)	frameshift		1763,1255	WP_011254005.1	DUF2974 domain-containing protein	98.0	36.8	84.0
MGA_983	LOCUS_09190	sequence106:1769..2347(+)	frameshift		1766	WP_011254005.1	DUF2974 domain-containing protein	99.5	46.8	83.8
MGA_991	LOCUS_09270	sequence106:7738..8349(-)	frameshift		8366	WP_003549341.1	replicative DNA helicase	100.0	43.8	90.6
MGA_992	LOCUS_09280	sequence106:8364..9131(-)	frameshift		8366	WP_003549341.1	replicative DNA helicase	100.0	55.0	88.6
MGA_993	LOCUS_09290	sequence106:9235..9612(-)	frameshift		9303	WP_003549343.1	50S ribosomal protein L9	89.6	74.2	72.3
MGA_1007	LOCUS_09430	sequence106:25252..25413(+)	frameshift		25389	WP_003549419.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	86.8	7.3	100.0
MGA_1008	LOCUS_09440	sequence106:25392..26228(+)	frameshift		26193,25389	WP_003549419.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	95.7	42.1	95.1
MGA_1009	LOCUS_09450	sequence106:26231..27148(+)	frameshift		26192	WP_003549419.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	100.0	48.3	89.8
MGA_1010	LOCUS_09460	sequence106:27477..27950(+)	frameshift		27938	WP_011254637.1	pyruvate oxidase	98.1	25.6	92.9
MGA_1011	LOCUS_09470	sequence106:28076..28858(+)	frameshift		27938,28820	WP_011254637.1	pyruvate oxidase	97.7	42.3	92.5
MGA_1012	LOCUS_09480	sequence106:28846..29292(+)	frameshift		28831	WP_011254637.1	pyruvate oxidase	100.0	24.5	86.5
MGA_1018	LOCUS_09540	sequence106:34859..35293(-)	frameshift		35303	WP_002211863.1	MFS transporter	92.4	29.4	34.6
MGA_1019	LOCUS_09550	sequence106:35301..36224(-)	frameshift		35309	WP_001183183.1	MFS transporter	92.8	59.3	22.7
MGA_1035	LOCUS_09710	sequence107:10644..10895(+)	frameshift		10850	WP_003548818.1	glycerol-3-phosphate acyltransferase	75.9	30.7	84.1
MGA_1036	LOCUS_09720	sequence107:10796..11251(+)	frameshift		10850	WP_003548818.1	glycerol-3-phosphate acyltransferase	89.4	65.9	83.0
MGA_1041	LOCUS_09770	sequence107:18224..18772(+)	frameshift		18197	WP_011254070.1	hydrolase	100.0	83.9	85.2
MGA_1043	LOCUS_09790	sequence107:20650..21897(+)	frameshift		21885	WP_011254071.1	peptide ABC transporter substrate-binding protein	99.3	75.6	88.8
MGA_1044	LOCUS_09800	sequence107:21875..22282(+)	frameshift		21891	WP_011254071.1	peptide ABC transporter substrate-binding protein	97.8	24.4	87.9
MGA_1058	LOCUS_09940	sequence107:34441..35151(+)	frameshift		35103	WP_003548873.1	magnesium-translocating P-type ATPase	93.6	24.9	84.7
MGA_1059	LOCUS_09950	sequence107:35202..37103(+)	frameshift		35103	WP_003548873.1	magnesium-translocating P-type ATPase	97.2	69.3	78.5
MGA_1061	LOCUS_09970	sequence107:39177..39800(+)	frameshift		39785	WP_003548876.1	TatD family hydrolase	100.0	81.2	87.9
MGA_1067	LOCUS_10030	sequence108:2514..3023(+)	frameshift		3005	WP_003548351.1	DNA polymerase I	97.0	18.5	78.0
MGA_1068	LOCUS_10040	sequence108:3038..4000(+)	frameshift		3005,3998	WP_003548351.1	DNA polymerase I	100.0	36.0	63.4
MGA_1069	LOCUS_10050	sequence108:4006..5175(+)	frameshift		3997	WP_003548351.1	DNA polymerase I	100.0	43.9	95.1
MGA_1097	LOCUS_10330	sequence108:28490..29446(+)	frameshift		29440	WP_003548294.1	phenylalanine--tRNA ligase subunit beta	99.7	39.4	93.4
MGA_1098	LOCUS_10340	sequence108:29446..30903(+)	frameshift		29440	WP_003548294.1	phenylalanine--tRNA ligase subunit beta	100.0	60.3	90.9
MGA_1102	LOCUS_10380	sequence108:32823..33047(+)	partial			WP_003530441.1	type II toxin-antitoxin system HicB family antitoxin	90.5	57.6	39.1
MGA_1108	LOCUS_10440	sequence108:39974..40285(+)	frameshift		40282	WP_011254484.1	rhomboid family intramembrane serine protease	100.0	45.6	88.3
MGA_1109	LOCUS_10450	sequence108:40303..40653(+)	frameshift		40282	WP_011254484.1	rhomboid family intramembrane serine protease	100.0	51.3	88.8
MGA_1113	LOCUS_10490	sequence108:42332..43003(+)	frameshift		42979	WP_003548246.1	methionine gamma-lyase family protein	96.9	51.9	90.3
MGA_1114	LOCUS_10500	sequence108:43003..43581(+)	frameshift		42979	WP_003548246.1	methionine gamma-lyase family protein	99.0	45.7	93.2
MGA_1117	LOCUS_10530	sequence108:46379..47203(+)	frameshift		46340	WP_003548241.1	hypothetical protein	100.0	80.1	73.9
MGA_1120	LOCUS_10560	sequence109:1314..1742(-)	partial			WP_003546414.1	CPBP family intramembrane metalloprotease	72.5	25.4	34.0
MGA_1121	LOCUS_10570	sequence109:2126..2596(+)	frameshift		2575	WP_100206281.1	IS982 family transposase	86.5	52.1	42.0
MGA_1124	LOCUS_10600	sequence109:3461..3826(-)	frameshift		3825	WP_011254047.1	alpha/beta hydrolase	100.0	55.5	92.6
MGA_1125	LOCUS_10610	sequence109:3823..4116(-)	frameshift		3825	WP_011254047.1	alpha/beta hydrolase	100.0	44.5	89.7
MGA_1126	LOCUS_10620	sequence109:4129..4713(-)	frameshift		4729,4738	WP_011254046.1	glycosyltransferase	100.0	71.6	88.7
MGA_1127	LOCUS_10630	sequence109:4661..4942(-)	frameshift		4729,4738	WP_011254046.1	glycosyltransferase	73.1	25.1	92.6
MGA_1130	LOCUS_10660	sequence109:7049..7366(+)	frameshift		7345	WP_003548688.1	alpha/beta hydrolase	96.2	32.8	81.2
MGA_1131	LOCUS_10670	sequence109:7402..7899(+)	frameshift		7345	WP_003548688.1	alpha/beta hydrolase	100.0	53.6	91.5
MGA_1132	LOCUS_10680	sequence109:7921..9081(+)	frameshift		9021	WP_003548687.1	cardiolipin synthase	95.1	75.7	85.0
MGA_1133	LOCUS_10690	sequence109:9123..9377(+)	frameshift		9021	WP_003548687.1	cardiolipin synthase	100.0	17.3	81.0
MGA_1139	LOCUS_10750	sequence109:12453..12776(+)	frameshift		12722	WP_011254043.1	DNA-3-methyladenine glycosylase	84.1	42.9	86.7
MGA_1140	LOCUS_10760	sequence109:12781..13086(+)	frameshift		12722	WP_011254043.1	DNA-3-methyladenine glycosylase	99.0	47.6	89.0
MGA_1143	LOCUS_10790	sequence109:15947..16330(-)	frameshift		16401	WP_011254041.1	HNH endonuclease signature motif containing protein	100.0	41.6	87.4
MGA_1144	LOCUS_10800	sequence109:16327..16800(-)	frameshift		16401	WP_011254041.1	HNH endonuclease signature motif containing protein	84.7	43.3	71.1
MGA_1151	LOCUS_10870	sequence109:22115..22507(+)	frameshift		22405	WP_011254032.1	zinc metalloprotease HtpX	80.0	34.9	84.6
MGA_1152	LOCUS_10880	sequence109:22507..23010(+)	frameshift		22405	WP_011254032.1	zinc metalloprotease HtpX	100.0	56.0	86.8
MGA_1159	LOCUS_10950	sequence109:28762..29133(-)	frameshift		29135	WP_003546245.1	SLAP domain-containing protein	97.6	24.2	47.9
MGA_1161	LOCUS_10970	sequence109:29504..30766(-)	partial			WP_011254604.1	RNA-guided endonuclease TnpB family protein	51.7	71.7	44.5
MGA_1164	LOCUS_11000	sequence109:32539..33549(-)	frameshift		33572	WP_015613276.1	trypsin-like peptidase domain-containing protein	100.0	81.8	87.5
MGA_1165	LOCUS_11010	sequence109:33546..33791(-)	frameshift		33572	WP_015613276.1	trypsin-like peptidase domain-containing protein	90.1	16.5	58.9
MGA_1167	LOCUS_11030	sequence109:34684..35121(-)	frameshift		35276	WP_003548584.1	two-component system regulatory protein YycI	100.0	52.9	87.6
MGA_1168	LOCUS_11040	sequence109:35253..35507(-)	frameshift		35276	WP_003548584.1	two-component system regulatory protein YycI	91.7	28.1	83.1
MGA_1172	LOCUS_11080	sequence109:39811..40032(+)	partial			WP_003562902.1	hypothetical protein	71.2	63.8	57.7
MGA_1175	LOCUS_11110	sequence109:42427..42948(+)	frameshift		42897,42954	WP_003548569.1	glycosyltransferase family 8 protein	90.2	49.1	86.5
MGA_1176	LOCUS_11120	sequence109:42992..43381(+)	frameshift		42897,42954	WP_003548569.1	glycosyltransferase family 8 protein	100.0	40.6	89.1
MGA_1188	LOCUS_11240	sequence110:3614..4267(-)	partial			WP_003644056.1	helix-turn-helix transcriptional regulator	79.7	71.2	32.0
MGA_1189	LOCUS_11250	sequence110:5037..5963(+)	partial			WP_052846404.1	ABC transporter ATP-binding protein	74.0	74.8	34.8
MGA_1196	LOCUS_11320	sequence110:10811..11404(-)	partial			WP_005808295.1	TetR/AcrR family transcriptional regulator	39.1	37.3	35.1
MGA_1202	LOCUS_11380	sequence110:16818..17306(+)	frameshift		16803	WP_011861425.1	MarR family transcriptional regulator	57.4	42.9	49.5
MGA_1206	LOCUS_11420	sequence110:20408..20788(+)	internal_stop_codon	20786..20788(+)		WP_002263364.1	zinc-dependent alcohol dehydrogenase family protein	99.2	36.4	59.8
MGA_1207	LOCUS_11430	sequence110:20834..21448(+)	internal_stop_codon	20786..20788(+)		WP_002263364.1	zinc-dependent alcohol dehydrogenase family protein	99.5	58.5	63.2
MGA_1208	LOCUS_11440	sequence110:21593..21865(+)	frameshift		21793	WP_003548490.1	cupin domain-containing protein	75.6	48.2	70.6
MGA_1209	LOCUS_11450	sequence110:21847..22005(+)	frameshift		21793	WP_003548490.1	cupin domain-containing protein	100.0	39.4	59.3
MGA_1221	LOCUS_11570	sequence110:31223..31390(+)	internal_stop_codon	31388..31390(+)		WP_011254447.1	GNAT family N-acetyltransferase	87.3	28.2	60.4
MGA_1226	LOCUS_11620	sequence110:34164..34409(+)	internal_stop_codon	34085..34087(+)		WP_011241755.1	Fic family protein	92.6	30.2	61.3
MGA_1236	LOCUS_11720	sequence110:41972..42712(+)	partial			WP_003641977.1	CPBP family intramembrane metalloprotease	78.0	74.6	29.6
MGA_1238	LOCUS_11740	sequence110:43901..44344(-)	frameshift		43930	WP_201247873.1	glycosyltransferase	96.6	38.4	64.8
MGA_1239	LOCUS_11750	sequence110:44702..44998(-)	internal_stop_codon	44702..44704(-)		WP_201247873.1	glycosyltransferase	100.0	25.9	74.5
MGA_1241	LOCUS_11770	sequence110:45408..45926(+)	frameshift		45390	WP_003548564.1	lysophospholipid acyltransferase family protein	94.8	56.4	46.0
MGA_1248	LOCUS_11840	sequence110:49586..49852(+)	frameshift		49846	WP_003702509.1	nitroreductase family protein	97.7	40.2	61.6
MGA_1249	LOCUS_11850	sequence110:49893..50231(+)	frameshift		49846	WP_003702509.1	nitroreductase family protein	100.0	51.9	58.9
MGA_1250	LOCUS_11860	sequence110:50698..50859(-)	frameshift		50921	WP_002296177.1	2-dehydropantoate 2-reductase	92.5	15.7	73.5
MGA_1251	LOCUS_11870	sequence110:50919..51242(-)	frameshift,internal_stop_codon	51248..51250(-)	50920,51322	WP_002296177.1	2-dehydropantoate 2-reductase	99.1	32.9	45.3
MGA_1252	LOCUS_11880	sequence110:51314..51637(-)	frameshift,internal_stop_codon	51248..51250(-)	51322	WP_002387098.1	ketopantoate reductase family protein	95.3	32.6	53.9
MGA_1254	LOCUS_11900	sequence110:52160..52519(-)	internal_stop_codon	52598..52600(-)		WP_011254448.1	lipoprotein	100.0	42.0	77.3
MGA_1257	LOCUS_11930	sequence111:2904..3359(-)	frameshift		3361	WP_003549571.1	APC family permease	99.3	32.4	86.0
MGA_1258	LOCUS_11940	sequence111:3326..4297(-)	frameshift		3361	WP_003549571.1	APC family permease	96.6	67.4	86.2
MGA_1259	LOCUS_11950	sequence111:4314..4577(-)	frameshift		4576	WP_011254611.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	100.0	36.0	87.4
MGA_1260	LOCUS_11960	sequence111:4574..5041(-)	frameshift		4576	WP_011254611.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	100.0	64.0	90.3
MGA_1265	LOCUS_12010	sequence111:7677..8105(-)	frameshift		8122	WP_011476653.1	HTH domain-containing protein	91.5	21.0	41.5
MGA_1266	LOCUS_12020	sequence111:8102..9304(-)	frameshift,internal_stop_codon	9419..9421(-)	8122	WP_011476653.1	HTH domain-containing protein	98.0	64.3	24.3
MGA_1275	LOCUS_12110	sequence111:20157..20732(+)	frameshift		20654	WP_003549550.1	ABC transporter ATP-binding protein	86.9	71.2	90.4
MGA_1276	LOCUS_12120	sequence111:20806..21549(+)	frameshift		21465	WP_015613435.1	ABC transporter permease	88.7	26.0	84.5
MGA_1277	LOCUS_12130	sequence111:21633..22169(+)	frameshift		21465,22362,22332,22119	WP_015613435.1	ABC transporter permease	94.4	19.9	84.5
MGA_1278	LOCUS_12140	sequence111:22377..23261(+)	frameshift		22331,22364,23261,22118	WP_015613435.1	ABC transporter permease	100.0	34.5	76.2
MGA_1284	LOCUS_12200	sequence111:28013..28507(-)	frameshift,internal_stop_codon	28603..28605(-)	28482	WP_116878224.1	IS982 family transposase	95.7	59.1	46.2
MGA_1286	LOCUS_12220	sequence111:30176..30370(-)	internal_stop_codon	30386..30388(-)		WP_003564461.1	DUF898 family protein	98.4	59.4	81.0
MGA_1292	LOCUS_12280	sequence111:35877..36029(-)	partial			WP_003706303.1	teichoic acid D-Ala incorporation-associated protein DltX	68.0	69.4	67.6
MGA_1298	LOCUS_12340	sequence111:41389..42114(+)	frameshift		42108	WP_003549506.1	cation:proton antiporter	100.0	62.0	89.6
MGA_1299	LOCUS_12350	sequence111:42237..42557(+)	frameshift		42108	WP_003549506.1	cation:proton antiporter	100.0	27.2	88.7
MGA_1305	LOCUS_12410	sequence111:46815..47471(-)	partial			WP_000862401.1	MFS transporter	97.2	52.0	33.6
MGA_1306	LOCUS_12420	sequence111:47580..48467(+)	partial			WP_003549642.1	helix-turn-helix transcriptional regulator	50.2	50.7	33.1
MGA_1310	LOCUS_12460	sequence111:51038..52045(+)	frameshift		51973	WP_011254626.1	ABC transporter ATP-binding protein/permease	93.1	40.1	90.4
MGA_1311	LOCUS_12470	sequence111:51978..53378(+)	frameshift		51973	WP_011254626.1	ABC transporter ATP-binding protein/permease	100.0	59.8	82.0
MGA_1320	LOCUS_12550	sequence112:6056..6454(-)	partial			WP_011727560.1	type II toxin-antitoxin system death-on-curing family toxin	50.0	50.8	47.0
MGA_1332	LOCUS_12670	sequence112:13956..17462(+)	partial			WP_010990116.1	invasin LmiA	14.4	39.9	24.7
MGA_1333	LOCUS_12680	sequence112:18518..19747(+)	partial			WP_011222037.1	phage tail tip lysozyme	40.8	42.7	54.2
MGA_1348	LOCUS_12830	sequence112:31361..35131(+)	partial			WP_002898683.1	TraM recognition domain-containing protein	57.6	83.3	21.4
MGA_1357	LOCUS_12920	sequence112:41977..45321(+)	partial			WP_000516926.1	VaFE repeat-containing surface-anchored protein	21.5	22.1	35.1
MGA_1369	LOCUS_13040	sequence112:54576..55373(+)	partial			WP_011391901.1	DUF3854 domain-containing protein	39.6	30.2	34.3
MGA_1370	LOCUS_13050	sequence112:55345..56094(+)	partial			WP_011391901.1	DUF3854 domain-containing protein	70.3	41.2	31.4
MGA_1377	LOCUS_13120	sequence113:6404..8956(+)	frameshift		8996,8935	WP_011674840.1	PII-type proteinase	97.2	43.0	56.3
MGA_1379	LOCUS_13140	sequence113:9083..12436(+)	frameshift		8996,8935	WP_011674840.1	PII-type proteinase	76.7	44.2	37.5
MGA_1381	LOCUS_13160	sequence113:14447..14731(-)	internal_stop_codon	14735..14737(-)		WP_003548782.1	peptidase M13	100.0	14.5	68.1
MGA_1382	LOCUS_13170	sequence113:14735..16378(-)	internal_stop_codon	14735..14737(-)		WP_003548782.1	peptidase M13	99.8	84.9	58.9
MGA_1384	LOCUS_13190	sequence113:17796..19433(-)	partial			WP_003548412.1	SLAP domain-containing protein	78.2	61.4	25.6
MGA_1386	LOCUS_13210	sequence113:21118..22803(+)	partial			WP_003548049.1	YSIRK-type signal peptide-containing protein	88.4	12.3	26.3
MGA_1387	LOCUS_13220	sequence113:22852..25245(+)	partial			WP_003548049.1	YSIRK-type signal peptide-containing protein	78.7	14.4	49.8
MGA_1390	LOCUS_13250	sequence113:27086..27808(-)	partial			WP_011475589.1	O-acetyl-ADP-ribose deacetylase	29.6	15.5	50.7
MGA_1394	LOCUS_13290	sequence113:30945..31463(-)	frameshift		31450,30955	WP_003130487.1	TraX family protein	90.7	57.9	32.1
MGA_1396	LOCUS_13310	sequence113:32020..32589(+)	frameshift,internal_stop_codon	32588..32590(+)	31924	WP_010965834.1	FAD-binding oxidoreductase	95.8	38.8	48.1
MGA_1397	LOCUS_13320	sequence113:32803..33189(+)	internal_stop_codon	32587..32589(+)		WP_011948690.1	FAD-binding oxidoreductase	95.3	26.2	50.0
MGA_1398	LOCUS_13330	sequence113:33487..33909(+)	partial			WP_011254344.1	metal-dependent hydrolase	94.3	71.7	68.9
MGA_1402	LOCUS_13370	sequence113:37211..37486(+)	internal_stop_codon	37484..37486(+)		WP_011475996.1	DNA alkylation repair protein	95.6	39.9	51.7
MGA_1403	LOCUS_13380	sequence113:37487..37867(+)	internal_stop_codon	37484..37486(+)		WP_000362928.1	DNA alkylation repair protein	99.2	57.1	57.6
MGA_1407	LOCUS_13420	sequence113:40413..41006(-)	partial			WP_011459240.1	IS1634 family transposase	54.8	21.1	33.0
MGA_1408	LOCUS_13430	sequence113:40963..41979(-)	partial			WP_011460998.1	IS1634 family transposase	67.5	43.9	22.4
MGA_1412	LOCUS_13470	sequence113:44372..44683(+)	frameshift		44512,44605	WP_003548936.1	GNAT family N-acetyltransferase	48.5	29.9	66.0
MGA_1413	LOCUS_13480	sequence113:44634..44864(+)	frameshift		44512,44605	WP_003548936.1	GNAT family N-acetyltransferase	100.0	45.5	75.0
MGA_1420	LOCUS_13550	sequence113:48173..48607(-)	frameshift		48184	WP_003547471.1	hypothetical protein	99.3	75.7	62.2
MGA_1422	LOCUS_13570	sequence113:49211..52750(+)	partial			WP_041272308.1	DEAD/DEAH box helicase	58.6	64.3	37.6
MGA_1428	LOCUS_13630	sequence113:60259..60738(+)	internal_stop_codon	60166..60168(+)		WP_003547484.1	peptidylprolyl isomerase	100.0	79.9	83.0
MGA_1434	LOCUS_13690	sequence114:2968..3405(+)	frameshift		3381	WP_003548280.1	S8 family serine peptidase	95.2	8.0	54.3
MGA_1435	LOCUS_13700	sequence114:3359..3967(+)	frameshift,internal_stop_codon	3965..3967(+)	3381	WP_003548280.1	S8 family serine peptidase	96.0	11.8	58.8
MGA_1436	LOCUS_13710	sequence114:3974..6523(+)	internal_stop_codon	3965..3967(+)		WP_003548280.1	S8 family serine peptidase	21.4	10.9	65.9
MGA_1437	LOCUS_13720	sequence114:6562..8883(+)	frameshift,internal_stop_codon	8849..8851(+)	8850,8847	WP_011254318.1	YSIRK-type signal peptide-containing protein	83.1	30.2	30.1
MGA_1438	LOCUS_13730	sequence114:8900..9955(+)	frameshift,internal_stop_codon	8849..8851(+)	9937,8850,8835,8868,9949	WP_011254318.1	YSIRK-type signal peptide-containing protein	98.6	13.8	40.9
MGA_1439	LOCUS_13740	sequence114:9942..12122(+)	frameshift,internal_stop_codon	9971..9973(+),9956..9958(+),9953..9955(+)	9979,12092,9949,12047	WP_011254318.1	YSIRK-type signal peptide-containing protein	72.6	22.9	46.8
MGA_1440	LOCUS_13750	sequence114:12119..12787(+)	frameshift		12704,12050,12047	WP_011254317.1	LPXTG cell wall anchor domain-containing protein	73.4	6.1	58.3
MGA_1441	LOCUS_13760	sequence114:12784..13047(+)	frameshift		12715	WP_003548049.1	YSIRK-type signal peptide-containing protein	97.7	2.4	32.4
MGA_1442	LOCUS_13770	sequence114:13288..14577(+)	partial			WP_011254524.1	Rib/alpha-like domain-containing protein	44.1	9.9	30.5
MGA_1443	LOCUS_13780	sequence114:14740..18768(+)	partial			WP_003548049.1	YSIRK-type signal peptide-containing protein	89.5	28.7	22.2
MGA_1445	LOCUS_13800	sequence114:20302..20916(+)	internal_stop_codon	20914..20916(+)		WP_003548485.1	mucus-binding protein	99.5	31.3	59.1
MGA_1446	LOCUS_13810	sequence114:20995..21564(+)	internal_stop_codon	21562..21564(+),20914..20916(+)		WP_003548485.1	mucus-binding protein	98.9	29.2	64.4
MGA_1447	LOCUS_13820	sequence114:21634..22329(+)	internal_stop_codon	21562..21564(+)		WP_003548485.1	mucus-binding protein	98.7	30.9	50.2
MGA_1452	LOCUS_13870	sequence114:25761..26699(+)	frameshift		26633	WP_014748651.1	PTS cellobiose transporter subunit IIC	72.4	52.7	40.0
MGA_1459	LOCUS_13940	sequence114:32116..32424(+)	frameshift		32421	WP_011254511.1	NAD(P)H-hydrate dehydratase	100.0	36.2	78.4
MGA_1460	LOCUS_13950	sequence114:32421..32963(+)	frameshift		32421	WP_011254511.1	NAD(P)H-hydrate dehydratase	99.4	63.5	86.0
MGA_1468	LOCUS_14030	sequence114:39530..40231(+)	internal_stop_codon	39527..39529(+)		WP_015613420.1	GHKL domain-containing protein	97.0	68.6	50.2
MGA_1476	LOCUS_14110	sequence114:45106..45999(+)	partial			WP_066054433.1	M20 family metallopeptidase	68.7	49.7	27.9
MGA_1477	LOCUS_14120	sequence114:46002..46487(+)	frameshift		46457	WP_011016874.1	DUF3100 domain-containing protein	87.6	53.4	35.5
MGA_1478	LOCUS_14130	sequence114:46496..46819(+)	frameshift		46457	WP_014626156.1	DUF3100 domain-containing protein	83.2	20.2	38.5
MGA_1479	LOCUS_14140	sequence114:46812..47303(+)	partial			WP_003417884.1	hypothetical protein	65.6	69.9	35.1
MGA_1481	LOCUS_14160	sequence114:48036..48353(+)	frameshift,internal_stop_codon	48351..48353(+)	48512	WP_003550069.1	extracellular solute-binding protein	100.0	24.5	65.1
MGA_1482	LOCUS_14170	sequence114:48539..49333(+)	frameshift,internal_stop_codon	48351..48353(+)	48512	WP_003550069.1	extracellular solute-binding protein	100.0	61.0	78.0
MGA_1492	LOCUS_14270	sequence114:60698..61120(-)	partial			WP_010939860.1	DUF438 domain-containing protein	90.0	24.4	33.1
MGA_1493	LOCUS_14280	sequence114:61261..61743(+)	partial			WP_010906204.1	DUF4065 domain-containing protein	95.6	49.3	41.3
MGA_1495	LOCUS_14290	sequence115:1..543(+)	partial			WP_025080575.1	alpha/beta hydrolase	99.4	60.1	71.5
MGA_1496	LOCUS_14300	sequence115:790..1332(+)	partial			WP_002288289.1	alpha/beta hydrolase	81.1	44.4	70.1
MGA_1501	LOCUS_14350	sequence115:5027..5338(-)	partial			WP_003549962.1	SEC10/PgrA surface exclusion domain-containing protein	93.2	34.3	62.5
MGA_1502	LOCUS_14360	sequence115:6189..6758(+)	internal_stop_codon	6756..6758(+)		WP_003549970.1	maltose-6'-phosphate glucosidase	100.0	42.5	96.8
MGA_1503	LOCUS_14370	sequence115:6786..7526(+)	internal_stop_codon	6756..6758(+)		WP_003549970.1	maltose-6'-phosphate glucosidase	100.0	55.3	92.7
MGA_1504	LOCUS_14380	sequence115:7644..7904(+)	frameshift		7853	WP_015613407.1	MurR/RpiR family transcriptional regulator	81.4	27.1	80.0
MGA_1505	LOCUS_14390	sequence115:7874..8419(+)	frameshift		7853	WP_015613407.1	MurR/RpiR family transcriptional regulator	100.0	70.2	79.0
MGA_1509	LOCUS_14430	sequence115:10247..11068(-)	frameshift,internal_stop_codon	11146..11148(-)	11163	WP_011254541.1	calcium-translocating P-type ATPase, PMCA-type	96.7	30.3	83.8
MGA_1510	LOCUS_14440	sequence115:11092..12780(-)	frameshift,internal_stop_codon	11145..11147(-)	11153,12821	WP_011254541.1	calcium-translocating P-type ATPase, PMCA-type	97.0	62.0	76.1
MGA_1520	LOCUS_14540	sequence115:23651..23836(+)	frameshift		23824	WP_003550005.1	amino acid ABC transporter substrate-binding protein	95.1	21.3	77.6
MGA_1521	LOCUS_14550	sequence115:23917..24477(+)	frameshift		23824	WP_003550005.1	amino acid ABC transporter substrate-binding protein	97.8	66.9	86.8
MGA_1538	LOCUS_14720	sequence115:38674..39060(+)	internal_stop_codon	39058..39060(+)		WP_003550046.1	nicotinamide riboside transporter PnuC	100.0	51.8	91.4
MGA_1539	LOCUS_14730	sequence115:39082..39414(+)	internal_stop_codon	39058..39060(+)		WP_003550046.1	nicotinamide riboside transporter PnuC	98.2	44.1	89.8
MGA_1540	LOCUS_14740	sequence115:39598..42315(+)	internal_stop_codon	42313..42315(+)		WP_003550047.1	LPXTG cell wall anchor domain-containing protein	93.6	67.0	36.1
MGA_1554	LOCUS_14880	sequence115:54751..54930(+)	frameshift		54903	WP_011254527.1	serine hydrolase	86.4	16.4	59.6
MGA_1555	LOCUS_14890	sequence115:55023..55700(+)	frameshift		54903	WP_011254527.1	serine hydrolase	99.1	71.4	77.1
MGA_1557	LOCUS_14910	sequence115:56399..59770(+)	partial			WP_011254525.1	MMPL family transporter	76.1	72.4	67.5
MGA_1561	LOCUS_14950	sequence115:63064..63621(-)	internal_stop_codon	63751..63753(-)		WP_003550089.1	helix-turn-helix transcriptional regulator	99.5	64.9	74.6
MGA_1562	LOCUS_14960	sequence115:63751..63918(-)	internal_stop_codon	63751..63753(-)		WP_003550089.1	helix-turn-helix transcriptional regulator	100.0	19.3	87.3
MGA_1571	LOCUS_15040	sequence116:1719..2816(+)	partial			WP_003549215.1	glycerophosphodiester phosphodiesterase	63.6	54.1	34.8
MGA_1580	LOCUS_15130	sequence116:12383..12676(+)	frameshift		12658	WP_003546776.1	rod shape-determining protein	93.8	27.2	100.0
MGA_1581	LOCUS_15140	sequence116:12676..13386(+)	frameshift		12658	WP_003546776.1	rod shape-determining protein	100.0	70.7	95.8
MGA_1594	LOCUS_15270	sequence116:23915..24637(+)	frameshift		24601,24682	WP_011254257.1	cell division protein FtsA	97.1	51.8	89.7
MGA_1595	LOCUS_15280	sequence116:24753..25268(+)	frameshift		24601,24682	WP_011254257.1	cell division protein FtsA	100.0	37.8	83.0
MGA_1612	LOCUS_15450	sequence116:40336..41103(+)	internal_stop_codon	41101..41103(+)		WP_015613343.1	nuclease-related domain-containing protein	89.8	44.0	56.8
MGA_1613	LOCUS_15460	sequence116:41104..41973(+)	internal_stop_codon	41101..41103(+)		WP_015613343.1	nuclease-related domain-containing protein	100.0	55.8	62.8
MGA_1618	LOCUS_15510	sequence116:47120..47566(+)	frameshift		47539	WP_011254265.1	putative peptidoglycan glycosyltransferase FtsW	94.6	35.5	82.1
MGA_1619	LOCUS_15520	sequence116:47608..48303(+)	frameshift		47539	WP_011254265.1	putative peptidoglycan glycosyltransferase FtsW	100.0	58.6	89.2
MGA_1625	LOCUS_15580	sequence116:51438..52976(+)	frameshift		52955	WP_003546854.1	DNA internalization-related competence protein ComEC/Rec2	99.4	66.8	61.4
MGA_1626	LOCUS_15590	sequence116:52973..53293(+)	frameshift,internal_stop_codon	53292..53294(+)	52955	WP_003546854.1	DNA internalization-related competence protein ComEC/Rec2	100.0	13.9	81.1
MGA_1627	LOCUS_15600	sequence116:53444..53725(+)	internal_stop_codon	53291..53293(+)		WP_003546854.1	DNA internalization-related competence protein ComEC/Rec2	100.0	12.2	78.5
MGA_1634	LOCUS_15670	sequence116:59782..60111(+)	frameshift		60102	WP_003546863.1	trigger factor	98.2	24.2	91.6
MGA_1635	LOCUS_15680	sequence116:60579..61112(+)	partial			WP_003546863.1	trigger factor	88.1	35.3	93.6
MGA_1646	LOCUS_15780	sequence117:3298..3915(+)	internal_stop_codon	3913..3915(+)		WP_011254169.1	PTS sugar transporter subunit IIC	100.0	46.1	90.7
MGA_1647	LOCUS_15790	sequence117:3958..4635(+)	internal_stop_codon	3913..3915(+)		WP_011254169.1	PTS sugar transporter subunit IIC	100.0	50.6	88.9
MGA_1656	LOCUS_15880	sequence117:11956..12165(+)	internal_stop_codon	12163..12165(+)		WP_011254171.1	sugar ABC transporter substrate-binding protein	100.0	16.5	80.3
MGA_1657	LOCUS_15890	sequence117:12220..13245(+)	internal_stop_codon	12163..12165(+)		WP_011254171.1	sugar ABC transporter substrate-binding protein	100.0	79.1	93.8
MGA_1659	LOCUS_15910	sequence117:14143..14685(+)	internal_stop_codon	14683..14685(+)		WP_003546230.1	carbohydrate ABC transporter permease	100.0	63.2	90.0
MGA_1660	LOCUS_15920	sequence117:14809..15000(+)	internal_stop_codon	14683..14685(+)		WP_003546230.1	carbohydrate ABC transporter permease	100.0	22.1	96.8
MGA_1662	LOCUS_15940	sequence117:16307..16456(+)	partial			WP_003546234.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	93.9	12.5	95.7
MGA_1663	LOCUS_15950	sequence117:16886..17470(+)	frameshift		17461	WP_003546242.1	PTS sugar transporter subunit IIC	99.0	55.3	70.8
MGA_1664	LOCUS_15960	sequence117:17479..17925(+)	frameshift		17461	WP_003546242.1	PTS sugar transporter subunit IIC	100.0	42.9	79.9
MGA_1672	LOCUS_16040	sequence117:24633..26003(+)	frameshift		25691	WP_011254174.1	nicotinate phosphoribosyltransferase	77.4	71.7	94.6
MGA_1673	LOCUS_16050	sequence117:25913..26110(+)	frameshift		25691	WP_011254174.1	nicotinate phosphoribosyltransferase	100.0	13.2	92.3
MGA_1681	LOCUS_16130	sequence117:34606..35403(+)	frameshift		35385	WP_003546275.1	DNA helicase PcrA	98.1	34.9	92.7
MGA_1682	LOCUS_16140	sequence117:35388..36851(+)	frameshift		35385	WP_003546275.1	DNA helicase PcrA	100.0	65.0	85.0
MGA_1698	LOCUS_16300	sequence117:54469..55158(+)	partial			WP_012560534.1	DUF2326 domain-containing protein	76.9	32.4	32.8
MGA_1704	LOCUS_16360	sequence117:61553..63190(+)	frameshift		63130	WP_013230933.1	DEAD/DEAH box helicase	69.0	58.9	28.3
MGA_1720	LOCUS_16510	sequence118:9280..10140(+)	partial			WP_011861900.1	conjugated bile salt MFS transporter	64.0	41.7	33.5
MGA_1721	LOCUS_16520	sequence118:10153..10755(+)	internal_stop_codon	10753..10755(+)		WP_013389832.1	choloylglycine hydrolase	94.0	59.2	49.2
MGA_1726	LOCUS_16570	sequence118:15010..15630(+)	frameshift		15627	WP_003548485.1	mucus-binding protein	100.0	32.2	50.0
MGA_1727	LOCUS_16580	sequence118:15578..16756(+)	frameshift		15627	WP_003548485.1	mucus-binding protein	95.2	60.5	44.0
MGA_1728	LOCUS_16590	sequence118:16869..17381(+)	frameshift		17330	WP_003547002.1	C1 family peptidase	90.6	35.2	82.5
MGA_1729	LOCUS_16600	sequence118:17342..18184(+)	frameshift		17330	WP_003547002.1	C1 family peptidase	99.6	63.8	79.2
MGA_1752	LOCUS_16830	sequence118:41294..41524(-)	frameshift		41619	WP_003547041.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	100.0	19.3	86.8
MGA_1753	LOCUS_16840	sequence118:41617..42477(-)	frameshift		41619	WP_003547041.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	100.0	72.6	86.4
MGA_1755	LOCUS_16860	sequence118:42922..43395(+)	frameshift		43323,43335	WP_011254293.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	86.6	34.3	85.3
MGA_1756	LOCUS_16870	sequence118:43352..44110(+)	frameshift		43323,43335	WP_011254293.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	100.0	63.5	65.9
MGA_1759	LOCUS_16900	sequence118:46559..47419(+)	frameshift		46437	WP_011254294.1	2-hydroxyacid dehydrogenase family protein	94.1	83.8	73.2
MGA_1762	LOCUS_16930	sequence118:49655..50074(+)	frameshift		50026	WP_003547051.1	excinuclease ABC subunit UvrC	88.5	20.5	96.7
MGA_1763	LOCUS_16940	sequence118:50134..51456(+)	frameshift		50026	WP_003547051.1	excinuclease ABC subunit UvrC	100.0	73.3	88.4
MGA_1765	LOCUS_16960	sequence118:52855..53613(+)	frameshift		53583	WP_025015105.1	acyltransferase family protein	96.4	38.0	86.0
MGA_1766	LOCUS_16970	sequence118:53654..54772(+)	frameshift		53583	WP_025015105.1	acyltransferase family protein	100.0	58.4	74.5
MGA_1795	LOCUS_17250	sequence119:6062..6820(+)	frameshift		6799	WP_003548026.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	98.0	68.4	89.9
MGA_1796	LOCUS_17260	sequence119:6793..7146(+)	frameshift		6802	WP_003548026.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	98.3	31.9	95.7
MGA_1803	LOCUS_17330	sequence119:14195..14575(+)	frameshift		14716,14572	WP_003548017.1	GRP family sugar transporter	100.0	43.9	84.9
MGA_1804	LOCUS_17340	sequence119:14727..15056(+)	frameshift		14716,14572	WP_003548017.1	GRP family sugar transporter	100.0	38.0	76.1
MGA_1811	LOCUS_17410	sequence119:17979..18299(+)	partial			WP_003547349.1	DUF6176 family protein	48.1	42.9	76.5
MGA_1814	LOCUS_17440	sequence119:18981..19286(+)	partial			WP_003547344.1	NUDIX hydrolase	91.1	44.4	44.6
MGA_1815	LOCUS_17450	sequence119:19301..19762(+)	frameshift		19756	WP_135960404.1	MFS transporter	87.6	33.8	77.6
MGA_1816	LOCUS_17460	sequence119:19750..20430(+)	frameshift		19756	WP_135960404.1	MFS transporter	94.2	52.6	73.2
MGA_1817	LOCUS_17470	sequence119:20430..20627(+)	frameshift		20618	WP_011948047.1	cytidine deaminase	89.2	46.4	50.0
MGA_1818	LOCUS_17480	sequence119:20624..20824(+)	frameshift		20621	WP_000355920.1	cytidine deaminase	93.9	45.1	37.9
MGA_1823	LOCUS_17530	sequence119:24329..24607(-)	frameshift		24647	WP_003549308.1	AAC(3) family N-acetyltransferase	97.8	32.8	65.6
MGA_1824	LOCUS_17540	sequence119:24567..25127(-)	frameshift		24647	WP_003549308.1	AAC(3) family N-acetyltransferase	87.1	59.1	77.8
MGA_1826	LOCUS_17560	sequence119:28187..28318(+)	internal_stop_codon	28316..28318(+)		WP_011254430.1	ABC transporter ATP-binding protein	100.0	8.2	81.4
MGA_1829	LOCUS_17590	sequence119:31498..32292(+)	partial			WP_011122377.1	TIGR02452 family protein	70.8	70.1	35.0
MGA_1833	LOCUS_17630	sequence119:35365..35493(-)	internal_stop_codon	35572..35574(-)		WP_011254429.1	arsenate reductase family protein	100.0	35.3	81.0
MGA_1834	LOCUS_17640	sequence119:35572..35721(-)	internal_stop_codon	35572..35574(-)		WP_011254429.1	arsenate reductase family protein	100.0	41.2	81.6
MGA_1838	LOCUS_17680	sequence119:39370..39957(+)	frameshift		39933	WP_011254424.1	DUF2207 domain-containing protein	94.4	30.8	65.2
MGA_1839	LOCUS_17690	sequence119:39954..41162(+)	frameshift		39939	WP_011254424.1	DUF2207 domain-containing protein	90.5	61.0	52.4
MGA_1872	LOCUS_18020	sequence119:71493..71696(+)	frameshift		71466	WP_011254414.1	ATP-dependent DNA helicase RecG	100.0	10.2	85.5
MGA_1882	LOCUS_18120	sequence119:83390..84220(+)	frameshift		84175	WP_003547883.1	signal recognition particle-docking protein FtsY	95.3	60.3	54.7
MGA_1883	LOCUS_18130	sequence119:84244..84693(+)	frameshift		84178	WP_003547883.1	signal recognition particle-docking protein FtsY	100.0	34.6	91.9
MGA_1888	LOCUS_18180	sequence119:88514..89191(+)	frameshift		88530	WP_011475462.1	GRP family sugar transporter	96.9	75.3	47.1
MGA_1895	LOCUS_18250	sequence119:93421..93942(+)	internal_stop_codon	93940..93942(+)		WP_003547855.1	uracil-DNA glycosylase	100.0	79.0	80.9
MGA_1897	LOCUS_18270	sequence119:94890..95255(-)	frameshift		95266	WP_011254404.1	transcriptional repressor LexA	99.2	57.7	83.3
MGA_1898	LOCUS_18280	sequence119:95243..95515(-)	frameshift		95266	WP_011254404.1	transcriptional repressor LexA	95.6	41.3	86.0
MGA_1900	LOCUS_18300	sequence120:796..1275(+)	internal_stop_codon	1273..1275(+)		WP_003546337.1	aldo/keto reductase	92.5	52.9	89.8
MGA_1901	LOCUS_18310	sequence120:1294..1611(+)	internal_stop_codon	1273..1275(+)		WP_003546337.1	aldo/keto reductase	100.0	37.8	85.7
MGA_1904	LOCUS_18340	sequence120:3843..4622(+)	frameshift		4592	WP_003546350.1	MFS transporter	97.3	51.5	83.3
MGA_1905	LOCUS_18350	sequence120:4606..5352(+)	frameshift,internal_stop_codon	4564..4566(+)	4550	WP_003546350.1	MFS transporter	100.0	50.7	79.4
MGA_1910	LOCUS_18400	sequence120:10194..10784(-)	frameshift		10223	WP_011254191.1	transporter substrate-binding domain-containing protein	98.5	71.0	72.5
MGA_1913	LOCUS_18430	sequence120:13076..14581(+)	frameshift		14500	WP_011254194.1	ABC transporter ATP-binding protein	98.0	83.4	85.9
MGA_1914	LOCUS_18440	sequence120:14554..14844(+)	frameshift		14500	WP_011254194.1	ABC transporter ATP-binding protein	99.0	16.1	92.6
MGA_1925	LOCUS_18550	sequence120:24758..25699(-)	frameshift		25725	WP_003546372.1	extracellular solute-binding protein	100.0	72.5	90.7
MGA_1926	LOCUS_18560	sequence120:25684..26058(-)	frameshift		25725	WP_003546372.1	extracellular solute-binding protein	88.7	25.2	73.6
MGA_1940	LOCUS_18700	sequence120:40311..41888(+)	frameshift		41834	WP_003546418.1	alpha-glucoside-specific PTS transporter subunit IIBC	97.0	81.3	95.5
MGA_1941	LOCUS_18710	sequence120:41885..42190(+)	frameshift		41834,41831	WP_003546418.1	alpha-glucoside-specific PTS transporter subunit IIBC	100.0	16.1	88.1
MGA_1949	LOCUS_18790	sequence120:47327..47575(-)	frameshift		47651,47765	WP_011254206.1	amino acid permease	97.6	18.4	68.8
MGA_1950	LOCUS_18800	sequence120:47730..48041(-)	frameshift		48040,47650,47764	WP_011254206.1	amino acid permease	89.3	21.2	84.8
MGA_1951	LOCUS_18810	sequence120:48014..48634(-)	frameshift		48040,47764	WP_011254206.1	amino acid permease	96.1	45.6	85.9
MGA_1959	LOCUS_18890	sequence120:55548..56153(+)	frameshift		56144	WP_003546451.1	YihY/virulence factor BrkB family protein	93.5	61.0	72.9
MGA_1961	LOCUS_18910	sequence120:57539..57682(+)	frameshift		57661	WP_003546457.1	thiolase family protein	85.1	10.4	85.0
MGA_1963	LOCUS_18930	sequence120:58698..59216(+)	frameshift		59189	WP_003546459.1	hydroxymethylglutaryl-CoA reductase	97.7	41.7	73.2
MGA_1964	LOCUS_18940	sequence120:59264..59905(+)	frameshift		59192	WP_003546459.1	hydroxymethylglutaryl-CoA reductase	99.1	52.6	79.2
MGA_1965	LOCUS_18950	sequence120:59905..60417(+)	frameshift		60414	WP_003546460.1	hydroxymethylglutaryl-CoA synthase	100.0	43.9	91.8
MGA_1966	LOCUS_18960	sequence120:60480..61070(+)	frameshift		60414	WP_003546460.1	hydroxymethylglutaryl-CoA synthase	98.5	49.9	68.4
MGA_1968	LOCUS_18980	sequence120:61512..61964(+)	frameshift		61961	WP_003546465.1	alpha/beta hydrolase	99.3	48.5	68.5
MGA_1969	LOCUS_18990	sequence120:61961..62353(+)	frameshift		61961,62291	WP_003546465.1	alpha/beta hydrolase	86.9	37.0	68.1
MGA_1977	LOCUS_19070	sequence120:69096..69791(-)	frameshift		69790	WP_011254211.1	ATP-dependent Clp protease ATP-binding subunit	99.1	31.5	91.3
MGA_1978	LOCUS_19080	sequence120:69788..71143(-)	frameshift		69790	WP_011254211.1	ATP-dependent Clp protease ATP-binding subunit	98.7	61.1	88.1
MGA_1981	LOCUS_19110	sequence120:72033..73322(+)	frameshift		73286	WP_011254212.1	phosphoenolpyruvate--protein phosphotransferase	98.1	73.0	92.2
MGA_1982	LOCUS_19120	sequence120:73322..73765(+)	frameshift		73286	WP_011254212.1	phosphoenolpyruvate--protein phosphotransferase	100.0	25.5	99.3
MGA_1990	LOCUS_19200	sequence120:78980..79402(+)	frameshift,internal_stop_codon	79356..79358(+)	79339	WP_003546500.1	RluA family pseudouridine synthase	91.4	43.0	76.0
MGA_1991	LOCUS_19210	sequence120:79374..79892(+)	frameshift,internal_stop_codon	79356..79358(+)	79339	WP_003546500.1	RluA family pseudouridine synthase	98.8	56.3	74.7
MGA_2004	LOCUS_19340	sequence120:94943..96076(+)	partial			WP_003546527.1	helix-turn-helix domain-containing protein	72.9	73.8	76.8
MGA_2011	LOCUS_19410	sequence120:103187..103678(+)	partial			WP_011254220.1	ComF family protein	99.4	70.1	76.5
MGA_2024	LOCUS_19540	sequence121:5728..5970(+)	frameshift		5907	WP_003546577.1	glycogen/starch/alpha-glucan phosphorylase	87.5	8.7	45.7
MGA_2029	LOCUS_19590	sequence121:13870..16242(+)	frameshift,internal_stop_codon	16240..16242(+)	16437	WP_003546588.1	excinuclease ABC subunit UvrA	100.0	83.5	93.5
MGA_2030	LOCUS_19600	sequence121:16279..16485(+)	frameshift,internal_stop_codon	16240..16242(+)	16437	WP_011674333.1	excinuclease ABC subunit UvrA	77.9	5.5	96.2
MGA_2031	LOCUS_19610	sequence121:16461..16709(+)	frameshift,internal_stop_codon	16240..16242(+)	16437	WP_003546588.1	excinuclease ABC subunit UvrA	98.8	8.6	82.7
MGA_2038	LOCUS_19680	sequence121:22922..23821(-)	frameshift		23810,22924	WP_003546599.1	amino acid permease	99.3	62.1	90.2
MGA_2039	LOCUS_19690	sequence121:23805..24194(-)	frameshift		23822	WP_003546599.1	amino acid permease	99.2	26.8	92.2
MGA_2046	LOCUS_19760	sequence121:31334..31636(-)	internal_stop_codon	31679..31681(-)		WP_003546611.1	Cof-type HAD-IIB family hydrolase	99.0	34.0	77.8
MGA_2047	LOCUS_19770	sequence121:31679..32209(-)	internal_stop_codon	31679..31681(-)		WP_003546611.1	Cof-type HAD-IIB family hydrolase	100.0	60.5	78.4
MGA_2050	LOCUS_19800	sequence121:33976..34278(+)	frameshift		34272	WP_003546616.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	99.0	62.3	84.8
MGA_2051	LOCUS_19810	sequence121:34275..34454(+)	frameshift		34272	WP_003546616.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	96.6	35.8	71.9
MGA_2057	LOCUS_19870	sequence121:38793..39122(+)	internal_stop_codon	39120..39122(+)		WP_003546630.1	ABC transporter substrate-binding protein	100.0	30.5	76.1
MGA_2058	LOCUS_19880	sequence121:39132..39866(+)	internal_stop_codon	39120..39122(+)		WP_003546630.1	ABC transporter substrate-binding protein	100.0	68.3	81.6
MGA_2069	LOCUS_19990	sequence121:50446..51618(+)	internal_stop_codon	51616..51618(+)		WP_003546652.1	family 1 glycosylhydrolase	100.0	79.4	86.7
MGA_2070	LOCUS_20000	sequence121:51688..51921(+)	internal_stop_codon	51616..51618(+)		WP_003546652.1	family 1 glycosylhydrolase	97.4	15.3	80.0
MGA_2077	LOCUS_20070	sequence121:58832..59086(+)	frameshift		59056	WP_003546673.1	competence type IV pilus major pilin ComGC	83.3	58.8	62.9
MGA_2090	LOCUS_20200	sequence121:71399..72376(+)	frameshift		72361	WP_011254239.1	MFS transporter	99.7	70.1	81.2
MGA_2091	LOCUS_20210	sequence121:72405..72788(+)	frameshift		72370	WP_011254239.1	MFS transporter	98.4	27.1	72.8
MGA_2097	LOCUS_20270	sequence121:78292..78969(+)	frameshift		78954	WP_003546737.1	L-threonylcarbamoyladenylate synthase	98.7	66.5	92.8
MGA_2098	LOCUS_20280	sequence121:78966..79292(+)	frameshift		78960	WP_003546737.1	L-threonylcarbamoyladenylate synthase	100.0	32.3	87.0
MGA_2102	LOCUS_20320	sequence121:81269..81652(+)	frameshift		81188	WP_003546741.1	F0F1 ATP synthase subunit B	100.0	75.1	86.6
MGA_2119	LOCUS_20490	sequence121:93742..94581(+)	partial			WP_003549986.1	hypothetical protein	57.0	37.4	39.6
MGA_2124	LOCUS_20540	sequence121:99314..100498(+)	partial			WP_011254543.1	DUF4767 domain-containing protein	35.8	41.4	46.9
MGA_2125	LOCUS_20550	sequence121:100732..103722(+)	partial			WP_003546206.1	SEC10/PgrA surface exclusion domain-containing protein	17.1	47.9	38.1
MGA_2137	LOCUS_20670	sequence121:113494..113916(+)	partial			WP_003549642.1	helix-turn-helix transcriptional regulator	100.0	50.0	29.4
MGA_2144	LOCUS_20730	sequence122:747..1049(+)	frameshift		995	WP_011254403.1	ABC transporter transmembrane domain-containing protein	83.0	14.1	91.6
MGA_2145	LOCUS_20740	sequence122:1094..1315(+)	frameshift		995	WP_011254403.1	ABC transporter transmembrane domain-containing protein	83.6	10.4	91.8
MGA_2146	LOCUS_20750	sequence122:1329..2225(+)	partial			WP_011254403.1	ABC transporter transmembrane domain-containing protein	100.0	50.7	88.3
MGA_2147	LOCUS_20760	sequence122:2218..2502(+)	frameshift,internal_stop_codon	2500..2502(+)	2772	WP_015613381.1	ABC transporter ATP-binding protein	100.0	15.5	78.7
MGA_2148	LOCUS_20770	sequence122:2757..3704(+)	frameshift,internal_stop_codon	2500..2502(+),3703..3705(+)	2772	WP_015613381.1	ABC transporter ATP-binding protein	98.7	52.3	82.2
MGA_2149	LOCUS_20780	sequence122:3762..4010(+)	internal_stop_codon	3702..3704(+)		WP_015613381.1	ABC transporter ATP-binding protein	100.0	13.7	92.7
MGA_2152	LOCUS_20810	sequence122:7565..8419(+)	frameshift		8380	WP_003547839.1	GIY-YIG nuclease family protein	96.1	79.6	86.4
MGA_2153	LOCUS_20820	sequence122:8422..8595(+)	frameshift		8380	WP_003547839.1	GIY-YIG nuclease family protein	100.0	16.6	84.2
MGA_2159	LOCUS_20880	sequence122:12751..13425(+)	frameshift		13410	WP_003547823.1	phosphatidate cytidylyltransferase	98.7	81.5	88.7
MGA_2160	LOCUS_20890	sequence122:13413..13565(+)	frameshift		13410	WP_003547823.1	phosphatidate cytidylyltransferase	100.0	18.5	100.0
MGA_2163	LOCUS_20920	sequence122:16573..17490(+)	frameshift		17463	WP_003547817.1	PolC-type DNA polymerase III	97.4	20.8	83.6
MGA_2164	LOCUS_20930	sequence122:17589..20879(+)	frameshift		17463	WP_003547817.1	PolC-type DNA polymerase III	100.0	76.3	95.2
MGA_2169	LOCUS_20980	sequence122:23310..24191(+)	frameshift		24047	WP_011254396.1	translation initiation factor IF-2	84.0	27.8	63.1
MGA_2170	LOCUS_20990	sequence122:24206..25945(+)	frameshift		24047	WP_011254396.1	translation initiation factor IF-2	100.0	66.0	96.4
MGA_2182	LOCUS_21110	sequence122:39475..39690(+)	frameshift		39217	WP_003547784.1	adenine phosphoribosyltransferase	100.0	40.6	97.2
MGA_2187	LOCUS_21160	sequence122:45605..46168(-)	frameshift		46187,46406	WP_003547770.1	cardiolipin synthase	97.9	36.9	86.9
MGA_2188	LOCUS_21170	sequence122:46401..47093(-)	frameshift		46187,46406	WP_003547770.1	cardiolipin synthase	99.6	46.2	78.2
MGA_2201	LOCUS_21300	sequence122:59304..59540(-)	frameshift		59674	WP_003547727.1	threonine synthase	100.0	15.7	76.9
MGA_2202	LOCUS_21310	sequence122:59537..60793(-)	frameshift		59674	WP_003547727.1	threonine synthase	91.9	77.4	82.8
MGA_2206	LOCUS_21350	sequence122:63954..64430(+)	frameshift		63912	WP_003547717.1	peptide-methionine (S)-S-oxide reductase MsrA	100.0	83.6	79.7
MGA_2208	LOCUS_21370	sequence122:65685..66011(-)	frameshift,internal_stop_codon	65628..65630(-)	65699	WP_003547715.1	M23 family metallopeptidase	94.4	49.3	79.0
MGA_2223	LOCUS_21520	sequence122:80372..80758(+)	frameshift		80725	WP_003547613.1	class I SAM-dependent methyltransferase	95.3	53.5	79.5
MGA_2224	LOCUS_21530	sequence122:80758..81057(+)	frameshift		80725	WP_003547613.1	class I SAM-dependent methyltransferase	98.0	42.5	78.4
MGA_2226	LOCUS_21550	sequence122:81868..82902(+)	frameshift		82890	WP_003547606.1	peptidase T	99.4	82.4	91.8
MGA_2227	LOCUS_21560	sequence122:82874..83110(+)	frameshift		82890	WP_003547606.1	peptidase T	92.3	17.3	88.9
MGA_2236	LOCUS_21650	sequence122:88724..89536(+)	frameshift		89530	WP_003547594.1	hypothetical protein	99.3	82.5	73.9
MGA_2239	LOCUS_21680	sequence122:91890..92672(-)	frameshift		92674	WP_011254369.1	type 2 isopentenyl-diphosphate Delta-isomerase	100.0	76.7	76.9
MGA_2240	LOCUS_21690	sequence122:92636..92905(-)	frameshift		92674	WP_011254369.1	type 2 isopentenyl-diphosphate Delta-isomerase	86.5	22.7	80.5
MGA_2246	LOCUS_21750	sequence122:103119..103694(+)	frameshift		103691	WP_011254365.1	helicase C-terminal domain-containing protein	99.5	20.5	87.9
MGA_2247	LOCUS_21760	sequence122:103772..105505(+)	frameshift		105491,103691	WP_011254365.1	helicase C-terminal domain-containing protein	99.3	61.9	80.3
MGA_2248	LOCUS_21770	sequence122:105517..105897(+)	frameshift		105490	WP_011254365.1	helicase C-terminal domain-containing protein	86.5	11.8	83.5
MGA_2264	LOCUS_21930	sequence122:120745..122001(+)	frameshift		121995	WP_011254355.1	carbamoyl phosphate synthase large subunit	99.8	39.1	83.7
MGA_2265	LOCUS_21940	sequence122:121998..123935(+)	frameshift		121995	WP_011254355.1	carbamoyl phosphate synthase large subunit	100.0	60.8	79.7
MGA_2268	LOCUS_21970	sequence122:126464..126673(+)	frameshift		126652	WP_011254353.1	DegV family protein	91.3	21.5	85.7
MGA_2269	LOCUS_21980	sequence122:126666..127343(+)	frameshift		126652	WP_011254353.1	DegV family protein	100.0	76.8	85.3
MGA_2274	LOCUS_22030	sequence122:131732..132664(+)	frameshift,internal_stop_codon	132662..132664(+)	132682	WP_003547296.1	SLAP domain-containing protein	100.0	81.6	52.4
MGA_2275	LOCUS_22040	sequence122:132685..132876(+)	frameshift,internal_stop_codon	132662..132664(+)	132682	WP_003547296.1	SLAP domain-containing protein	96.8	15.6	59.0
MGA_2277	LOCUS_22060	sequence122:133371..133505(-)	frameshift		133682,133550	WP_011254348.1	MFS transporter	97.7	10.6	72.1
MGA_2278	LOCUS_22070	sequence122:133680..133922(-)	frameshift		133986,133685,133550	WP_011254348.1	MFS transporter	98.8	19.5	64.6
MGA_2279	LOCUS_22080	sequence122:133963..134574(-)	frameshift		133986,133685	WP_011254348.1	MFS transporter	96.6	49.1	62.8
MGA_2282	LOCUS_22110	sequence122:136683..136964(-)	frameshift,internal_stop_codon	136998..137000(-)	136739	WP_201276079.1	IS256-like element ISEf1 family transposase	81.7	21.8	52.6
MGA_2283	LOCUS_22120	sequence122:136998..137213(-)	frameshift,internal_stop_codon	136998..137000(-)	136739	WP_002326711.1	IS256-like element ISEf1 family transposase	100.0	18.1	53.5
MGA_2286	LOCUS_22150	sequence123:2001..3140(-)	frameshift		3355	WP_011674698.1	C69 family dipeptidase	100.0	79.7	59.2
MGA_2289	LOCUS_22180	sequence123:5580..5759(-)	frameshift		5585	WP_003548915.1	nucleobase:cation symporter-2 family protein	98.3	13.6	94.8
MGA_2319	LOCUS_22480	sequence123:36706..37344(+)	frameshift		37332	WP_003549010.1	tRNA lysidine(34) synthetase TilS	93.4	47.8	67.5
MGA_2320	LOCUS_22490	sequence123:37362..37985(+)	frameshift		37332	WP_003549010.1	tRNA lysidine(34) synthetase TilS	99.0	49.3	52.4
MGA_2364	LOCUS_22930	sequence123:75302..75490(+)	frameshift		75484	WP_003549053.1	tRNA pseudouridine(38-40) synthase TruA	100.0	23.7	90.3
MGA_2365	LOCUS_22940	sequence123:75532..76089(+)	frameshift		75484	WP_003549053.1	tRNA pseudouridine(38-40) synthase TruA	100.0	70.6	88.6
MGA_2373	LOCUS_23020	sequence123:80066..80626(+)	frameshift		79986	WP_003549071.1	sulfite exporter TauE/SafE family protein	100.0	73.8	83.3
MGA_2381	LOCUS_23100	sequence123:89025..89219(-)	frameshift,internal_stop_codon	89410..89412(-)	89370,89180,89318	WP_003547151.1	hypothetical protein	76.6	36.6	63.3
MGA_2386	LOCUS_23150	sequence123:93015..93578(+)	frameshift		93560	WP_003549080.1	DNA repair protein RadA	97.3	39.7	94.5
MGA_2387	LOCUS_23160	sequence123:93575..94390(+)	frameshift		93560	WP_003549080.1	DNA repair protein RadA	99.6	59.0	92.6
MGA_2388	LOCUS_23170	sequence123:94467..94883(+)	frameshift		94880,94970,94931	WP_011254122.1	glutamate--tRNA ligase	99.3	27.5	92.7
MGA_2389	LOCUS_23180	sequence123:94890..95963(+)	frameshift		94880,94970,94931	WP_011254122.1	glutamate--tRNA ligase	92.7	66.3	94.6
MGA_2403	LOCUS_23320	sequence123:107793..108203(+)	frameshift		108167	WP_003549098.1	phosphate ABC transporter permease subunit PstC	87.5	36.0	84.9
MGA_2404	LOCUS_23330	sequence123:108200..108787(+)	frameshift		108167	WP_003549098.1	phosphate ABC transporter permease subunit PstC	100.0	58.9	92.3
MGA_2412	LOCUS_23410	sequence123:114535..114885(+)	partial			WP_011254128.1	50S ribosomal protein L7/L12	61.2	59.2	73.2
MGA_2413	LOCUS_23420	sequence123:115250..115840(+)	frameshift		115232	WP_003549107.1	ion channel	98.5	68.8	68.6
MGA_2429	LOCUS_23580	sequence123:125731..125907(+)	internal_stop_codon	125905..125907(+)		WP_003549125.1	ribosomal protein S18-alanine N-acetyltransferase	100.0	30.5	82.8
MGA_2430	LOCUS_23590	sequence123:125962..126303(+)	internal_stop_codon	125905..125907(+)		WP_003549125.1	ribosomal protein S18-alanine N-acetyltransferase	100.0	59.5	77.9
MGA_2434	LOCUS_23630	sequence123:130775..131566(-)	internal_stop_codon	131675..131677(-)		WP_003549137.1	formyl-CoA transferase	100.0	59.1	87.8
MGA_2435	LOCUS_23640	sequence123:131675..132115(-)	internal_stop_codon	131675..131677(-)		WP_003549137.1	formyl-CoA transferase	98.6	31.9	81.2
MGA_2439	LOCUS_23680	sequence123:136772..137350(-)	frameshift		137400	WP_003549144.1	LacI family DNA-binding transcriptional regulator	100.0	58.5	80.7
MGA_2440	LOCUS_23690	sequence123:137377..137757(-)	frameshift		137400	WP_003549144.1	LacI family DNA-binding transcriptional regulator	97.6	37.5	82.9
MGA_2450	LOCUS_23790	sequence123:145978..147099(+)	frameshift		147087	WP_011254324.1	branched-chain amino acid transport system II carrier protein	99.5	81.4	51.8
MGA_2453	LOCUS_23820	sequence123:149341..150072(-)	partial			WP_172824474.1	sensor histidine kinase	94.7	55.8	38.2
MGA_2455	LOCUS_23840	sequence123:150642..151364(-)	frameshift		151465	WP_002263455.1	sugar ABC transporter substrate-binding protein	98.8	73.1	48.1
MGA_2465	LOCUS_23940	sequence123:160148..161011(+)	frameshift		160987	WP_003549167.1	Holliday junction branch migration DNA helicase RuvB	97.6	80.2	93.2
MGA_2471	LOCUS_24000	sequence123:166963..168243(+)	frameshift		168225	WP_003549179.1	alanine--tRNA ligase	98.8	47.9	94.1
MGA_2472	LOCUS_24010	sequence123:168240..169601(+)	frameshift		168225	WP_003549179.1	alanine--tRNA ligase	100.0	51.5	89.6
MGA_2491	LOCUS_24200	sequence123:183849..184316(+)	frameshift		184310	WP_003549224.1	TIGR01457 family HAD-type hydrolase	99.4	60.5	82.7
MGA_2492	LOCUS_24210	sequence123:184352..184618(+)	frameshift		184310	WP_003549224.1	TIGR01457 family HAD-type hydrolase	98.9	33.7	85.1
