{ "type": "genome", "identifier": "GCF_000617865.1", "organism": "Acidomonas methanolica NBRC 104435", "title": "Acidomonas methanolica NBRC 104435", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kinki University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000617865.1", "bioproject": "PRJNA224116", "biosample": "SAMD00036639", "wgs_master": "BAND00000000.1", "refseq_category": "na", "taxid": "1231351", "species_taxid": "437", "organism_name": "Acidomonas methanolica NBRC 104435", "infraspecific_name": "strain=MB58", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/03/31", "asm_name": "ASM61786v1", "asm_submitter": "Kinki University", "gbrs_paired_asm": "GCA_000617865.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/617/865/GCF_000617865.1_ASM61786v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3690031", "genome_size_ungapped": "3690021", "gc_percent": "64.500000", "replicon_count": "0", "scaffold_count": "546", "contig_count": "546", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000617865.1-RS_2024_12_15", "annotation_date": "2024-12-15", "total_gene_count": "3628", "protein_coding_gene_count": "3420", "non_coding_gene_count": "49", "pubmed_id": "24330138" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-03-31", "dateModified": "2014-03-31", "datePublished": "2014-03-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Acidomonas methanolica NBRC 104435" ], "sample_taxid": [ "1231351" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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444053, "species_taxid": 444053, "relation_to_type": "type", "validated": true, "ani": 78.2091, "matched_fragments": 278, "total_fragments": 1097, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acetobacter garciniae", "strain": "strain=TBRC 12339", "accession": "GCA_017377735.1", "taxid": 2817435, "species_taxid": 2817435, "relation_to_type": "type", "validated": true, "ani": 78.1172, "matched_fragments": 200, "total_fragments": 1097, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Asaia prunellae", "strain": "strain=JCM 25354", "accession": "GCA_000613885.1", "taxid": 610245, "species_taxid": 610245, "relation_to_type": "type", "validated": true, "ani": 78.0626, "matched_fragments": 127, "total_fragments": 1097, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kozakia baliensis", "strain": "strain=DSM 14400", "accession": "GCA_001787335.1", "taxid": 153496, "species_taxid": 153496, "relation_to_type": "type", 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