{ "type": "genome", "identifier": "GCF_000633935.1", "organism": "Ectothiorhodospira haloalkaliphila ATCC 51935", "title": "Ectothiorhodospira haloalkaliphila ATCC 51935", "description": "na", "data type": "Genome sequencing and assembly", "organization": "JGI", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000633935.1", "bioproject": "PRJNA224116", "biosample": "SAMN00118193", "wgs_master": "AJUE00000000.1", "refseq_category": "reference genome", "taxid": "765873", "species_taxid": "421628", "organism_name": "Ectothiorhodospira haloalkaliphila ATCC 51935", "infraspecific_name": "strain=ATCC 51935", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/04/21", "asm_name": "ASM63393v1", "asm_submitter": "JGI", "gbrs_paired_asm": "GCA_000633935.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/633/935/GCF_000633935.1_ASM63393v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3448426", "genome_size_ungapped": "3445226", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "36", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000633935.1-RS_2024_04_26", "annotation_date": "2024-04-26", "total_gene_count": "3240", "protein_coding_gene_count": "3125", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-04-21", "dateModified": "2014-04-21", "datePublished": "2014-04-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Ectothiorhodospira haloalkaliphila ATCC 51935" ], "sample_taxid": [ "765873" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": 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"total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ectothiorhodospira magna", "strain": "strain=B7-7", "accession": "GCA_900110965.1", "taxid": 867345, "species_taxid": 867345, "relation_to_type": "type", "validated": true, "ani": 80.4337, "matched_fragments": 447, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio sulfidiphilus", "strain": "strain=HL-EbGR7", "accession": "GCA_000021985.1", "taxid": 1033854, "species_taxid": 1033854, "relation_to_type": "type", "validated": true, "ani": 79.6028, "matched_fragments": 386, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio denitrificans", "strain": "strain=ALJD", "accession": "GCA_002000365.1", "taxid": 108003, "species_taxid": 108003, "relation_to_type": "type", "validated": true, "ani": 78.5173, "matched_fragments": 315, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio thiocyanodenitrificans", "strain": "strain=ARhD 1", "accession": "GCA_000378965.1", "taxid": 243063, "species_taxid": 243063, "relation_to_type": "type", "validated": true, "ani": 78.3167, "matched_fragments": 316, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalbus denitrificans", "strain": "strain=DSM 26407", "accession": "GCA_003337735.1", "taxid": 547122, "species_taxid": 547122, "relation_to_type": "type", "validated": true, "ani": 77.3118, "matched_fragments": 207, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 76.8602, "matched_fragments": 135, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas thermotolerans", "strain": "strain=DSM 14292", "accession": "GCA_000364625.1", "taxid": 157784, "species_taxid": 157784, "relation_to_type": "type", "validated": true, "ani": 76.6012, "matched_fragments": 136, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas yangonensis", "strain": "strain=MY50", "accession": "GCA_009932725.1", "taxid": 2579922, "species_taxid": 2579922, "relation_to_type": "type", "validated": true, "ani": 76.5154, "matched_fragments": 97, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas ekonensis", "strain": "strain=COR58", "accession": "GCA_019145435.1", "taxid": 2842353, "species_taxid": 2842353, "relation_to_type": "type", "validated": true, "ani": 76.4746, "matched_fragments": 125, "total_fragments": 1146, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax hongdengensis", "strain": 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