{ "type": "genome", "identifier": "GCF_000688415.1", "organism": "Corynebacterium pseudodiphtheriticum DSM 44287", "title": "Corynebacterium pseudodiphtheriticum DSM 44287", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000688415.1", "bioproject": "PRJNA224116", "biosample": "SAMN02743909", "wgs_master": "JIAH00000000.1", "refseq_category": "reference genome", "taxid": "1121368", "species_taxid": "37637", "organism_name": "Corynebacterium pseudodiphtheriticum DSM 44287", "infraspecific_name": "strain=DSM 44287", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/04/08", "asm_name": "ASM68841v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000688415.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/688/415/GCF_000688415.1_ASM68841v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2261008", "genome_size_ungapped": "2261008", "gc_percent": "55.500000", "replicon_count": "0", "scaffold_count": "13", "contig_count": "13", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000688415.1-RS_2024_04_22", "annotation_date": "2024-04-22", "total_gene_count": "2053", "protein_coding_gene_count": "1961", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-04-08", "dateModified": "2014-04-08", "datePublished": "2014-04-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Corynebacterium pseudodiphtheriticum DSM 44287" ], "sample_taxid": [ "1121368" ], "sample_host_organism": 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"ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000688415.1", "gtdb_species": "s__Corynebacterium pseudodiphtheriticum", "ani": 100.0, "matched_fragments": 746, "total_fragments": 746, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.46", "min_intra_species_ani": "98.41", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 10, "status": "conclusive" }, { "accession": "GCF_000375525.1", "gtdb_species": "s__Corynebacterium propinquum", "ani": 86.0448, "matched_fragments": 568, "total_fragments": 746, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, 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