{
    "type": "genome",
    "identifier": "GCF_000695095.2",
    "organism": "Gemmatimonas phototrophica",
    "title": "Gemmatimonas phototrophica",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Microbiology ASCR",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000695095.2",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02296694",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "1379270",
        "species_taxid": "1379270",
        "organism_name": "Gemmatimonas phototrophica",
        "infraspecific_name": "strain=AP64",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/04/06",
        "asm_name": "ASM69509v2",
        "asm_submitter": "Institute of Microbiology ASCR",
        "gbrs_paired_asm": "GCA_000695095.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/695/095/GCF_000695095.2_ASM69509v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4716552",
        "genome_size_ungapped": "4716552",
        "gc_percent": "64.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000695095.2-RS_2024_05_05",
        "annotation_date": "2024-05-05",
        "total_gene_count": "3968",
        "protein_coding_gene_count": "3892",
        "non_coding_gene_count": "57",
        "pubmed_id": "26636755;24821787"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-04-06",
    "dateModified": "2016-04-06",
    "datePublished": "2016-04-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Gemmatimonas phototrophica"
        ],
        "sample_taxid": [
            "1379270"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Swan Lake, Western Gobi Desert"
        ],
        "sample_host_location_id": [],
        "data_size": "1.313 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4716552",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4716552",
        "N50 (bp)": "4716552",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.4",
        "Number of CDSs": "3964",
        "Average Protein Length": "364.9",
        "Coding Ratio (%)": "92.0",
        "Number of rRNAs": "6",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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            {
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                "species_taxid": 173480,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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                "species_taxid": 2732249,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmatirosa kalamazoonensis",
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                "species_taxid": 861299,
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                "matched_fragments": 196,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longimicrobium terrae",
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                "accession": "GCA_013000925.1",
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                "species_taxid": 1639882,
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                "validated": true,
                "ani": 75.9567,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longimicrobium terrae",
                "strain": "strain=CECT 8660",
                "accession": "GCA_014198875.1",
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                "relation_to_type": "type",
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                "ani": 75.4529,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longimicrobium terrae",
                "strain": "strain=DSM 29007",
                "accession": "GCA_014202995.1",
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                "relation_to_type": "type",
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                "matched_fragments": 82,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Catellatospora sichuanensis",
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                "accession": "GCA_007483665.1",
                "taxid": 1969805,
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_002483225.1",
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            {
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    "_bac2feature": {
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}