{
    "type": "genome",
    "identifier": "GCF_000711295.1",
    "organism": "Desulfohalovibrio reitneri",
    "title": "Desulfohalovibrio reitneri",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000711295.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02744827",
        "wgs_master": "JOMJ00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1307759",
        "species_taxid": "1307759",
        "organism_name": "Desulfohalovibrio reitneri",
        "infraspecific_name": "strain=L21-Syr-AB",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/06/24",
        "asm_name": "ASM71129v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_000711295.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/711/295/GCF_000711295.1_ASM71129v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3390909",
        "genome_size_ungapped": "3390909",
        "gc_percent": "65.500000",
        "replicon_count": "0",
        "scaffold_count": "5",
        "contig_count": "5",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000711295.1-RS_2024_04_22",
        "annotation_date": "2024-04-22",
        "total_gene_count": "3271",
        "protein_coding_gene_count": "3177",
        "non_coding_gene_count": "61",
        "pubmed_id": "31068923"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-06-24",
    "dateModified": "2014-06-24",
    "datePublished": "2014-06-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Desulfohalovibrio reitneri"
        ],
        "sample_taxid": [
            "1307759"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.933 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3390909",
        "Number of Sequences": "5",
        "Longest Sequences (bp)": "2531670",
        "N50 (bp)": "2531670",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.5",
        "Number of CDSs": "3229",
        "Average Protein Length": "318.2",
        "Coding Ratio (%)": "90.9",
        "Number of rRNAs": "6",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
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                "organism_name": "Desulfohalovibrio reitneri",
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                "relation_to_type": "type",
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            },
            {
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                "species_taxid": 293256,
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                "ani_threshold": 95,
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                "taxid": 641491,
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                "status": "below_threshold"
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                "organism_name": "Fundidesulfovibrio magnetotacticus",
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            {
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            {
                "accession": "GCA_002422505.1",
                "gtdb_species": "s__Humidesulfovibrio sp002422505",
                "ani": 76.5985,
                "matched_fragments": 176,
                "total_fragments": 1127,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Humidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Desulfohalovibrio",
        "reitneri"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}