{ "type": "genome", "identifier": "GCF_000718025.1", "organism": "Kitasatospora purpeofusca", "title": "Kitasatospora purpeofusca", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Illinois", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000718025.1", "bioproject": "PRJNA224116", "biosample": "SAMN02645216", "wgs_master": "JODS00000000.1", "refseq_category": "na", "taxid": "67352", "species_taxid": "67352", "organism_name": "Kitasatospora purpeofusca", "infraspecific_name": "strain=NRRL B-1817", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/07/02", "asm_name": "ASM71802v1", "asm_submitter": "University of Illinois", "gbrs_paired_asm": "GCA_000718025.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/718/025/GCF_000718025.1_ASM71802v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9343474", "genome_size_ungapped": "9343474", "gc_percent": "73.500000", "replicon_count": "0", "scaffold_count": "138", "contig_count": "138", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000718025.1-RS_2024_09_22", "annotation_date": "2024-09-22", "total_gene_count": "8088", "protein_coding_gene_count": "7816", "non_coding_gene_count": "89", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-07-02", "dateModified": "2014-07-02", "datePublished": "2014-07-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Kitasatospora purpeofusca" ], "sample_taxid": [ "67352" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Unknown" ], 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"status": "conclusive" }, { "organism_name": "Streptomyces rubellomurinus", "strain": "strain=ATCC 31215", "accession": "GCA_000961885.1", "taxid": 359131, "species_taxid": 359131, "relation_to_type": "type", "validated": true, "ani": 85.6934, "matched_fragments": 1795, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora aureofaciens", "strain": "strain=ATCC 10762", "accession": "GCA_001188955.3", "taxid": 1894, "species_taxid": 1894, "relation_to_type": "type", "validated": true, "ani": 85.3896, "matched_fragments": 1821, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora aureofaciens", "strain": "strain=NRRL 2209", "accession": "GCA_000978515.1", "taxid": 1894, "species_taxid": 1894, "relation_to_type": "type", "validated": true, "ani": 85.372, "matched_fragments": 1550, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora indigofera", "strain": "strain=JCM 4646", "accession": "GCA_014655955.1", "taxid": 67307, "species_taxid": 67307, "relation_to_type": "type", "validated": true, "ani": 84.0729, "matched_fragments": 1814, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora herbaricolor", "strain": "strain=JCM 4138", "accession": "GCA_014648975.1", "taxid": 68217, "species_taxid": 68217, "relation_to_type": "type", "validated": true, "ani": 84.058, "matched_fragments": 1820, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora atroaurantiaca", "strain": "strain=DSM 41649", "accession": "GCA_007828955.1", "taxid": 285545, "species_taxid": 285545, "relation_to_type": "type", "validated": true, "ani": 83.6276, "matched_fragments": 1509, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora paracochleata", "strain": 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54571, "species_taxid": 54571, "relation_to_type": "type", "validated": true, "ani": 79.2652, "matched_fragments": 1032, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lichenis", "strain": "strain=LCR6-01", "accession": "GCA_023218175.1", "taxid": 2306967, "species_taxid": 2306967, "relation_to_type": "type", "validated": true, "ani": 79.112, "matched_fragments": 1210, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces albireticuli", "strain": "strain=NRRL B1670", "accession": "GCA_021228125.1", "taxid": 1940, "species_taxid": 1940, "relation_to_type": "type", "validated": true, "ani": 78.713, "matched_fragments": 1204, "total_fragments": 3066, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 9.38, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000718025.1", "gtdb_species": 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27.571, "optimum_ph": 6.625, "genome_size": 9886735.0, "gc_content": 72.563, "coding_genes": 6651.222, "rRNA16S_genes": 8.0, "tRNA_genes": 68.666, "gram_stain": 1.0, "sporulation": 1.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.5, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.5, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Kitasatospora", "purpeofusca" ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }