{ "type": "genome", "identifier": "GCF_000730385.1", "organism": "Alteromonas australica", "title": "Alteromonas australica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University Miguel Hernandez", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000730385.1", "bioproject": "PRJNA224116", "biosample": "SAMN02743545", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "589873", "species_taxid": "589873", "organism_name": "Alteromonas australica", "infraspecific_name": "strain=H 17", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/07/17", "asm_name": "ASM73038v1", "asm_submitter": "University Miguel Hernandez", "gbrs_paired_asm": "GCA_000730385.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/730/385/GCF_000730385.1_ASM73038v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4308833", "genome_size_ungapped": "4308833", "gc_percent": "45.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000730385.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "3773", "protein_coding_gene_count": "3677", "non_coding_gene_count": "75", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-07-17", "dateModified": "2014-07-17", "datePublished": "2014-07-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Alteromonas australica" ], "sample_taxid": [ "589873" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tasman Sea" ], "sample_host_location_id": [], "data_size": "1.229 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4308833", "Number of Sequences": "1", "Longest Sequences (bp)": "4308833", "N50 (bp)": "4308833", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "44.9", "Number of CDSs": "3692", "Average Protein Length": "345.1", "Coding Ratio (%)": "88.7", "Number of rRNAs": "15", "Number of tRNAs": "56", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alteromonas australica", "strain": "strain=H 17", "accession": "GCA_000730385.1", "taxid": 589873, "species_taxid": 589873, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1435, "total_fragments": 1436, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Alteromonas mediterranea", "strain": "strain=DE", "accession": "GCA_000020585.3", "taxid": 314275, "species_taxid": 314275, "relation_to_type": "type", "validated": true, "ani": 81.9356, "matched_fragments": 442, "total_fragments": 1436, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas profundi", "strain": "strain=345S023", "accession": "GCA_010500865.1", "taxid": 2696062, "species_taxid": 2696062, "relation_to_type": "type", "validated": true, "ani": 81.807, "matched_fragments": 532, "total_fragments": 1436, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas abrolhosensis", "strain": "strain=PEL67E", "accession": "GCA_001953635.1", "taxid": 1892904, "species_taxid": 1892904, "relation_to_type": "type", "validated": true, "ani": 80.6293, "matched_fragments": 398, "total_fragments": 1436, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas 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