{
    "type": "genome",
    "identifier": "GCF_000735355.1",
    "organism": "Buttiauxella agrestis ATCC 33320",
    "title": "Buttiauxella agrestis ATCC 33320",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "UW-GEL",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000735355.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02742621",
        "wgs_master": "JMPI00000000.1",
        "refseq_category": "na",
        "taxid": "1006004",
        "species_taxid": "82977",
        "organism_name": "Buttiauxella agrestis ATCC 33320",
        "infraspecific_name": "strain=ATCC 33320",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/07/28",
        "asm_name": "GBAG_DRAFTv1",
        "asm_submitter": "UW-GEL",
        "gbrs_paired_asm": "GCA_000735355.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/735/355/GCF_000735355.1_GBAG_DRAFTv1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4725816",
        "genome_size_ungapped": "4725816",
        "gc_percent": "51.000000",
        "replicon_count": "0",
        "scaffold_count": "93",
        "contig_count": "93",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000735355.1-RS_2024_05_11",
        "annotation_date": "2024-05-11",
        "total_gene_count": "4417",
        "protein_coding_gene_count": "4262",
        "non_coding_gene_count": "80",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-07-28",
    "dateModified": "2014-07-28",
    "datePublished": "2014-07-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Buttiauxella agrestis ATCC 33320"
        ],
        "sample_taxid": [
            "1006004"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "1.349 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4725816",
        "Number of Sequences": "93",
        "Longest Sequences (bp)": "546536",
        "N50 (bp)": "135577",
        "Gap Ratio (%)": "0.000063",
        "GCcontent (%)": "50.8",
        "Number of CDSs": "4274",
        "Average Protein Length": "325.2",
        "Coding Ratio (%)": "88.2",
        "Number of rRNAs": "2",
        "Number of tRNAs": "65",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Buttiauxella agrestis",
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Buttiauxella agrestis",
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                "relation_to_type": "type",
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                "matched_fragments": 1402,
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                "status": "conclusive"
            },
            {
                "organism_name": "Buttiauxella izardii",
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                "species_taxid": 82991,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Buttiauxella brennerae",
                "strain": "strain=ATCC 51605",
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                "species_taxid": 82988,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.4647,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Buttiauxella massiliensis",
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                "accession": "GCA_902500225.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1188,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Buttiauxella warmboldiae",
                "strain": "strain=CCUG 35512",
                "accession": "GCA_003818135.1",
                "taxid": 82993,
                "species_taxid": 82993,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.1429,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Buttiauxella ferragutiae",
                "strain": "strain=ATCC 51602",
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                "species_taxid": 82989,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Buttiauxella noackiae",
                "strain": "strain=ATCC 51607",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudocitrobacter corydidari",
                "strain": "",
                "accession": "GCA_021172065.1",
                "taxid": 2891570,
                "species_taxid": 2891570,
                "relation_to_type": "type",
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                "ani": 79.7344,
                "matched_fragments": 653,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter sakazakii",
                "strain": "strain=ATCC 29544",
                "accession": "GCA_001971035.1",
                "taxid": 28141,
                "species_taxid": 28141,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2427,
                "matched_fragments": 577,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Citrobacter rodentium",
                "strain": "strain=DSM 16636",
                "accession": "GCA_021278985.1",
                "taxid": 67825,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Klebsiella pneumoniae",
                "strain": "strain=PartO-Kpneumoniae-RM8376",
                "accession": "GCA_022869665.1",
                "taxid": 573,
                "species_taxid": 573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1414,
                "matched_fragments": 555,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCF_000735355.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Buttiauxella",
                "ani_circumscription_radius": 95.0,
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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                "accession": "GCF_902500225.1",
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            },
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            },
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            {
                "accession": "GCF_006376615.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "ATCC",
        "33320"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}