{ "type": "genome", "identifier": "GCF_000735445.1", "organism": "Serratia marcescens subsp. marcescens ATCC 13880", "title": "Serratia marcescens subsp. marcescens ATCC 13880", "description": "na", "data type": "Genome sequencing and assembly", "organization": "UW-GEL (University of Wisconsin - Genome Evolution Laboratory)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000735445.1", "bioproject": "PRJNA224116", "biosample": "SAMN02743269", "wgs_master": "JMPQ00000000.1", "refseq_category": "na", "taxid": "911022", "species_taxid": "615", "organism_name": "Serratia marcescens subsp. marcescens ATCC 13880", "infraspecific_name": "strain=ATCC 13880", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/07/28", "asm_name": "GSMA_DRAFTv1", "asm_submitter": "UW-GEL (University of Wisconsin - Genome Evolution Laboratory)", "gbrs_paired_asm": "GCA_000735445.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/735/445/GCF_000735445.1_GSMA_DRAFTv1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5092452", "genome_size_ungapped": "5092452", "gc_percent": "60.000000", "replicon_count": "0", "scaffold_count": "62", "contig_count": "62", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000735445.1-RS_2024_05_12", "annotation_date": "2024-05-12", "total_gene_count": "4901", "protein_coding_gene_count": "4764", "non_coding_gene_count": "88", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-07-28", "dateModified": "2014-07-28", "datePublished": "2014-07-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Serratia marcescens subsp. marcescens ATCC 13880" ], "sample_taxid": [ "911022" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "unknown" ], "sample_host_location_id": [], "data_size": "1.425 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 98.06, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5092452", "Number of Sequences": "62", "Longest Sequences (bp)": "577179", "N50 (bp)": "238240", "Gap Ratio (%)": "0.000020", "GCcontent (%)": "59.8", "Number of CDSs": "4749", "Average Protein Length": "312.7", "Coding Ratio (%)": "87.5", "Number of rRNAs": "4", "Number of tRNAs": "74", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Serratia marcescens", "strain": "strain=ATCC 13880 substr. 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