# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_8	LOCUS_00060	sequence1:3580..4611(+)	frameshift		3563,3548	WP_014207511.1	phosphoethanolamine--lipid A transferase	99.7	62.3	89.5
MGA_60	LOCUS_00580	sequence1:57742..57990(+)	partial			WP_004574636.1	ISL3-like element ISPpu12 family transposase	86.6	16.6	100.0
MGA_61	LOCUS_00590	sequence1:58251..59000(-)	frameshift		59025,58370	WP_014207511.1	phosphoethanolamine--lipid A transferase	84.3	38.3	91.0
MGA_62	LOCUS_00600	sequence1:59005..59718(-)	frameshift		59025	WP_014207511.1	phosphoethanolamine--lipid A transferase	97.0	41.7	71.3
MGA_63	LOCUS_00610	sequence1:60000..62318(-)	partial			WP_011037788.1	TonB-dependent receptor	60.0	63.7	23.7
MGA_143	LOCUS_01400	sequence1:147132..147686(+)	partial			WP_003701667.1	BRO family protein	65.8	36.8	46.3
MGA_147	LOCUS_01440	sequence1:151562..151765(+)	partial			WP_005804461.1	single-stranded DNA-binding protein	73.1	25.1	63.3
MGA_151	LOCUS_01480	sequence1:154694..155269(+)	partial			WP_038965325.1	hypothetical protein	78.5	72.3	28.7
MGA_169	LOCUS_01620	sequence1:176268..176972(+)	partial			WP_004526753.1	type VI secretion system Vgr family protein	81.2	15.4	30.3
MGA_182	LOCUS_01750	sequence1:190190..191704(+)	partial			WP_013878139.1	DUF2235 domain-containing protein	60.7	44.5	27.1
MGA_322	LOCUS_03150	sequence1:337476..337877(+)	partial			WP_011705908.1	hypothetical protein	76.7	73.6	41.9
MGA_340	LOCUS_03330	sequence1:349039..349830(+)	partial			WP_011267977.1	hypothetical protein	70.3	76.4	45.4
MGA_353	LOCUS_03460	sequence1:354996..356174(+)	partial			WP_013096347.1	hypothetical protein	15.6	20.6	55.6
MGA_361	LOCUS_03540	sequence1:360176..364486(+)	partial			WP_011104844.1	phage tail tape measure protein	19.0	24.6	40.9
MGA_453	LOCUS_04450	sequence1:460433..463357(+)	partial			WP_014207731.1	hypothetical protein	25.4	32.8	36.9
MGA_454	LOCUS_04460	sequence1:463468..464067(-)	partial			WP_005111779.1	TetR/AcrR family transcriptional regulator	59.8	55.3	39.0
MGA_457	LOCUS_04490	sequence1:465422..466108(+)	partial			WP_014206344.1	type VI secretion system Vgr family protein	50.4	11.3	37.6
MGA_459	LOCUS_04510	sequence1:466923..467723(+)	partial			WP_011975735.1	tetratricopeptide repeat protein	80.8	57.1	41.3
MGA_556	LOCUS_05470	sequence1:572911..573321(-)	partial			WP_011707247.1	ComEA family DNA-binding protein	45.6	58.5	51.6
MGA_572	LOCUS_05630	sequence1:591122..591766(+)	partial			WP_014208382.1	DMT family transporter	100.0	69.5	94.9
MGA_651	LOCUS_06420	sequence1:684297..684851(-)	partial			WP_005068176.1	DUF2726 domain-containing protein	57.6	72.1	44.3
MGA_653	LOCUS_06440	sequence1:685122..686345(+)	partial			WP_012503932.1	replication initiation factor domain-containing protein	64.4	57.7	37.8
MGA_663	LOCUS_06540	sequence1:692815..693177(+)	frameshift,internal_stop_codon	693188..693190(+),693182..693184(+),693248..693250(+)	693132	WP_014208312.1	hypothetical protein	90.8	70.8	67.9
MGA_708	LOCUS_06990	sequence1:735660..735908(+)	partial			WP_005455908.1	DUF2061 domain-containing protein	64.6	39.6	47.2
MGA_722	LOCUS_07130	sequence1:750092..751024(-)	partial			WP_014208275.1	pseudouridine synthase	62.9	83.7	94.4
MGA_775	LOCUS_07660	sequence1:816900..818282(+)	partial			WP_014208234.1	AAA family ATPase	33.9	70.9	81.4
MGA_818	LOCUS_08090	sequence1:864404..865051(+)	partial			WP_014208204.1	hypothetical protein	100.0	72.1	87.4
MGA_942	LOCUS_09330	sequence1:996457..996747(-)	partial			WP_005072004.1	ATP synthase subunit I	100.0	72.7	97.9
MGA_1001	LOCUS_09910	sequence1:1062232..1063518(-)	partial			WP_014206346.1	DUF1911 domain-containing protein	13.1	15.6	64.3
MGA_1026	LOCUS_10160	sequence1:1095265..1095897(-)	partial			WP_003704933.1	NeuD/PglB/VioB family sugar acetyltransferase	94.8	48.2	59.3
MGA_1032	LOCUS_10220	sequence1:1101416..1101982(-)	partial			WP_003721782.1	maltose acetyltransferase domain-containing protein	60.6	67.4	40.9
MGA_1067	LOCUS_10570	sequence1:1131611..1132594(-)	partial			WP_011268606.1	Fic family protein	39.4	59.7	31.0
MGA_1085	LOCUS_10750	sequence1:1143588..1144757(+)	partial			WP_001120888.1	IS91-like element ISVsa3 family transposase	90.0	70.4	100.0
MGA_1128	LOCUS_11170	sequence1:1182784..1183014(-)	partial			WP_014207661.1	hypothetical protein	76.3	74.4	89.7
MGA_1156	LOCUS_11450	sequence1:1211108..1211428(-)	partial			WP_010635605.1	membrane protein insertion efficiency factor YidD	61.3	84.1	65.2
MGA_1174	LOCUS_11620	sequence1:1231057..1231638(-)	partial			WP_005804461.1	single-stranded DNA-binding protein	68.4	67.7	99.2
MGA_1197	LOCUS_11850	sequence1:1261012..1261356(+)	frameshift		1260889	WP_005066837.1	DUF805 domain-containing protein	100.0	59.7	90.4
MGA_1252	LOCUS_12400	sequence1:1319437..1321035(-)	partial			WP_011105367.1	hypothetical protein	42.7	35.5	38.8
MGA_1253	LOCUS_12410	sequence1:1321039..1321626(-)	frameshift		1321649	WP_014206351.1	type VI secretion system Vgr family protein	45.6	10.4	69.7
MGA_1254	LOCUS_12420	sequence1:1321518..1323914(-)	frameshift		1321649	WP_014207953.1	type VI secretion system Vgr family protein	91.0	64.1	84.5
MGA_1304	LOCUS_12920	sequence1:1377937..1378932(-)	frameshift		1377954	WP_014207988.1	MATE family efflux transporter	98.5	72.9	90.5
MGA_1431	LOCUS_14180	sequence1:1512892..1513362(+)	internal_stop_codon	1512838..1512840(+)		WP_014207832.1	PilN domain-containing protein	100.0	73.2	85.9
MGA_1549	LOCUS_15360	sequence1:1637514..1638266(+)	frameshift		1638230	WP_014207746.1	30S ribosomal protein S3	90.0	84.9	99.1
MGA_1572	LOCUS_15590	sequence1:1651112..1651402(+)	partial			WP_014207739.1	hypothetical protein	96.9	72.1	57.0
MGA_1635	LOCUS_16210	sequence1:1716281..1716514(-)	partial			WP_014207553.1	YbaN family protein	100.0	63.1	85.7
MGA_1694	LOCUS_16800	sequence1:1782488..1783558(-)	partial			WP_014207609.1	SPOR domain-containing protein	43.0	42.9	71.9
MGA_1864	LOCUS_18490	sequence1:1969409..1972123(+)	frameshift		1972081,1971858,1972084,1972072,1972075	WP_014207470.1	Ig-like domain-containing protein	97.2	37.1	65.3
MGA_1894	LOCUS_18790	sequence1:2015327..2016511(+)	frameshift		2016487	WP_014207449.1	Ig-like domain-containing protein	97.0	57.5	80.6
MGA_1927	LOCUS_19120	sequence1:2065972..2066121(+)	partial			WP_002118887.1	lipoprotein	100.0	65.8	65.3
MGA_1937	LOCUS_19220	sequence1:2076844..2078490(-)	partial			WP_010927086.1	glycosyltransferase family 39 protein	59.5	61.6	39.5
MGA_1970	LOCUS_19550	sequence1:2111839..2113242(-)	partial			WP_014207391.1	cell envelope integrity protein TolA	43.9	51.7	53.6
MGA_2009	LOCUS_19940	sequence1:2150873..2151067(+)	partial			WP_002118955.1	NF038104 family lipoprotein	57.8	71.2	83.8
MGA_2016	LOCUS_20010	sequence1:2155790..2156116(+)	frameshift		2156107	WP_010971509.1	GFA family protein	88.0	65.5	41.1
MGA_2109	LOCUS_20940	sequence1:2268691..2270094(+)	partial			WP_010878431.1	molybdopterin biosynthesis protein	36.4	24.8	26.0
MGA_2133	LOCUS_21180	sequence1:2301294..2301728(+)	partial			WP_014207277.1	4'-phosphopantetheinyl transferase superfamily protein	100.0	57.4	86.8
MGA_2183	LOCUS_21680	sequence1:2365092..2365457(-)	frameshift		2365130	WP_002118194.1	DUF962 domain-containing protein	90.9	73.8	82.7
MGA_2192	LOCUS_21770	sequence1:2373705..2374493(-)	partial			WP_003701667.1	BRO family protein	40.8	37.1	51.4
MGA_2198	LOCUS_21830	sequence1:2376849..2377700(-)	partial			WP_000102217.1	exodeoxyribonuclease VIII	63.3	17.4	27.5
MGA_2203	LOCUS_21880	sequence1:2379474..2379914(-)	partial			WP_015039654.1	pentapeptide repeat-containing protein	45.9	21.9	59.7
MGA_2205	LOCUS_21900	sequence1:2380652..2381773(-)	partial			WP_003412926.1	XRE family transcriptional regulator	61.9	61.4	28.3
MGA_2229	LOCUS_22140	sequence1:2391472..2391990(+)	partial			WP_011267982.1	DUF2280 domain-containing protein	66.3	75.8	48.3
MGA_2245	LOCUS_22300	sequence1:2401967..2403145(+)	partial			WP_013096347.1	hypothetical protein	15.6	20.6	55.6
MGA_2252	LOCUS_22370	sequence1:2406255..2406596(+)	partial			WP_000203831.1	phage antirepressor Ant	92.0	50.0	53.8
MGA_2255	LOCUS_22400	sequence1:2407503..2412416(+)	partial			WP_011104844.1	phage tail tape measure protein	45.9	68.6	28.7
MGA_2356	LOCUS_23410	sequence1:2510127..2510765(-)	partial			WP_001220164.1	TetR/AcrR family transcriptional regulator	40.1	39.8	28.2
MGA_2442	LOCUS_24260	sequence1:2597371..2597634(+)	internal_stop_codon	2597632..2597634(+)		WP_014207123.1	acyl-CoA dehydrogenase family protein	100.0	23.0	96.6
MGA_2443	LOCUS_24270	sequence1:2597641..2598507(+)	internal_stop_codon	2597632..2597634(+)		WP_014207123.1	acyl-CoA dehydrogenase family protein	100.0	76.2	96.9
MGA_2478	LOCUS_24620	sequence1:2640422..2640928(+)	partial			WP_014207097.1	RNA chaperone Hfq	41.7	40.2	100.0
MGA_2499	LOCUS_24830	sequence1:2665082..2665525(+)	frameshift		2665011	WP_014207080.1	spore coat U domain-containing protein	93.2	77.0	93.4
MGA_2568	LOCUS_25520	sequence1:2742582..2744066(+)	frameshift		2744060	WP_014207010.1	molybdopterin-dependent oxidoreductase	100.0	65.3	92.9
MGA_2569	LOCUS_25530	sequence1:2744126..2744854(+)	frameshift		2744063	WP_014207010.1	molybdopterin-dependent oxidoreductase	99.6	31.8	90.5
MGA_2727	LOCUS_27110	sequence1:2901912..2903216(-)	frameshift		2903211	WP_014206901.1	penicillin acylase family protein	99.5	52.7	96.5
MGA_2728	LOCUS_27120	sequence1:2903197..2904387(-)	frameshift		2903211	WP_014206901.1	penicillin acylase family protein	98.0	47.3	95.9
MGA_2764	LOCUS_27480	sequence1:2941372..2941920(+)	frameshift,internal_stop_codon	2941331..2941333(+)	2941285	WP_014206869.1	TetR/AcrR family transcriptional regulator	98.4	81.7	77.7
MGA_2810	LOCUS_27940	sequence1:2991155..2992828(-)	partial			WP_000273909.1	AAA family ATPase	50.6	53.1	39.7
MGA_2814	LOCUS_27980	sequence1:2996303..2997118(+)	frameshift		2997076	WP_000606740.1	DUF3696 domain-containing protein	95.2	73.0	26.4
MGA_2815	LOCUS_27990	sequence1:2997103..2997378(+)	frameshift		2997076	WP_000606740.1	DUF3696 domain-containing protein	85.7	20.9	38.5
MGA_2827	LOCUS_28110	sequence1:3010967..3011278(+)	partial			WP_164925740.1	helix-turn-helix transcriptional regulator	85.4	66.2	39.8
MGA_2831	LOCUS_28150	sequence1:3013065..3016142(+)	partial			WP_005489009.1	DEAD/DEAH box helicase	33.7	67.1	24.0
MGA_2848	LOCUS_28320	sequence1:3035828..3036238(+)	frameshift		3036226	WP_002113678.1	fimbrial protein	98.5	75.7	99.3
MGA_2849	LOCUS_28330	sequence1:3036219..3036353(+)	frameshift		3036226	WP_002113678.1	fimbrial protein	95.5	23.7	92.9
MGA_2893	LOCUS_28770	sequence1:3083675..3084502(-)	partial			WP_005787233.1	RsiV family protein	36.7	37.0	34.3
MGA_2937	LOCUS_29210	sequence1:3132775..3133515(-)	partial			WP_014206658.1	HRDC domain-containing protein	95.9	63.1	92.4
MGA_3062	LOCUS_30460	sequence1:3263311..3263553(-)	partial			WP_014206585.1	hypothetical protein	73.8	83.3	71.7
MGA_3089	LOCUS_30730	sequence1:3291939..3292187(-)	partial			WP_014206567.1	hypothetical protein	43.9	78.3	83.3
MGA_3100	LOCUS_30840	sequence1:3300451..3300801(-)	internal_stop_codon	3300847..3300849(-)		WP_014206556.1	hypothetical protein	100.0	60.4	88.8
MGA_3114	LOCUS_30980	sequence1:3314848..3315399(-)	frameshift		3315455	WP_014206545.1	iron-containing redox enzyme family protein	100.0	62.9	75.4
MGA_3117	LOCUS_31010	sequence1:3319109..3320023(-)	frameshift		3320039	WP_009966754.1	GIY-YIG nuclease family protein	92.8	71.2	40.9
MGA_3124	LOCUS_31080	sequence1:3328833..3329048(-)	partial			WP_014206545.1	iron-containing redox enzyme family protein	100.0	21.3	66.2
MGA_3165	LOCUS_31490	sequence1:3372824..3374104(-)	frameshift		3374126	WP_014206518.1	alkyl hydroperoxide reductase subunit F	100.0	80.7	96.7
MGA_3166	LOCUS_31500	sequence1:3374085..3374390(-)	frameshift		3374126	WP_014206203.1	alkyl hydroperoxide reductase subunit F	90.1	17.2	96.7
MGA_3173	LOCUS_31570	sequence1:3378790..3378951(-)	partial			WP_003525954.1	XapX domain-containing protein	96.2	53.7	45.1
MGA_3225	LOCUS_32090	sequence1:3432113..3432472(-)	partial			WP_014206470.1	amino acid ABC transporter permease	100.0	56.4	96.6
MGA_3235	LOCUS_32180	sequence1:3442921..3443520(+)	partial			WP_004574636.1	ISL3-like element ISPpu12 family transposase	96.0	44.5	98.4
MGA_3248	LOCUS_32310	sequence1:3462201..3462743(+)	frameshift		3462128,3462161,3462149	WP_014206869.1	TetR/AcrR family transcriptional regulator	100.0	82.1	75.6
MGA_3263	LOCUS_32460	sequence1:3476651..3477232(+)	frameshift		3477199	WP_014206137.1	arginine N-succinyltransferase	98.4	52.2	94.2
MGA_3264	LOCUS_32470	sequence1:3477238..3477744(+)	frameshift		3477199	WP_014206137.1	arginine N-succinyltransferase	100.0	46.2	98.2
MGA_3345	LOCUS_33280	sequence1:3553156..3553968(+)	partial			WP_000184977.1	phage minor head protein	63.0	72.9	34.3
MGA_3361	LOCUS_33440	sequence1:3561785..3564823(+)	partial			WP_181318520.1	tail tape measure protein	19.7	11.9	52.8
MGA_3367	LOCUS_33500	sequence1:3569398..3571887(+)	partial			WP_010951067.1	phage tail protein	97.6	59.4	39.2
MGA_3373	LOCUS_33560	sequence1:3575378..3575872(-)	partial			WP_005069871.1	translesion error-prone DNA polymerase V autoproteolytic subunit	84.8	71.4	60.7
MGA_3399	LOCUS_33820	sequence1:3604395..3613061(+)	partial			WP_011268209.1	calcium-binding protein	36.7	38.2	28.1
MGA_3447	LOCUS_34300	sequence1:3658151..3658780(+)	partial			WP_011038959.1	hypothetical protein	49.3	35.1	35.0
MGA_3459	LOCUS_34420	sequence1:3665206..3665439(-)	partial			WP_002000816.1	DNA-binding transcriptional regulator Fis	58.4	64.3	66.7
MGA_3475	LOCUS_34580	sequence1:3676312..3677097(+)	partial			WP_000988183.1	ATP-binding protein	85.1	71.9	29.5
MGA_3478	LOCUS_34610	sequence1:3677739..3678485(+)	partial			WP_015705701.1	terminase small subunit	73.4	53.6	41.0
MGA_3484	LOCUS_34670	sequence1:3682654..3683319(+)	partial			WP_001048075.1	peptidase	69.2	66.7	33.8
MGA_3494	LOCUS_34770	sequence1:3691518..3698333(+)	partial			WP_173064006.1	hypothetical protein	45.2	48.3	25.1
MGA_3508	LOCUS_34910	sequence1:3710032..3710520(+)	partial			WP_014206255.1	TolC family protein	93.2	55.7	85.4
MGA_3531	LOCUS_35140	sequence1:3736354..3737442(+)	frameshift		3737415	WP_014206293.1	EAL domain-containing protein	98.1	77.3	86.5
MGA_3540	LOCUS_35230	sequence1:3746143..3746382(+)	frameshift		3745973	WP_014206311.1	hypothetical protein	100.0	52.0	83.5
MGA_3554	LOCUS_35370	sequence1:3761404..3766896(+)	partial			WP_014206848.1	DUF637 domain-containing protein	56.8	53.6	42.0
MGA_3598	LOCUS_35810	sequence1:3816347..3816637(+)	internal_stop_codon	3816635..3816637(+)		WP_014206380.1	redox-sensitive transcriptional activator SoxR	100.0	62.3	84.4
MGA_3628	LOCUS_36110	sequence1:3848331..3848966(+)	partial			WP_011262114.1	tetratricopeptide repeat protein	55.5	50.2	38.5
MGA_3633	LOCUS_36160	sequence1:3853783..3854670(-)	partial			WP_051000362.1	AraC family transcriptional regulator	68.5	61.0	31.7
MGA_3710	LOCUS_36920	sequence2:965..1915(-)	partial			WP_002219732.1	replication initiation protein RepM	57.9	56.6	52.2
MGA_3721	LOCUS_37030	sequence2:8490..9425(-)	partial			WP_002219732.1	replication initiation protein RepM	67.8	63.6	43.3
MGA_3728	LOCUS_37100	sequence2:14562..15080(-)	partial			WP_010947931.1	Dot/Icm type IV secretion system effector LpnE	90.7	48.5	29.0
