# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_19	LOCUS_00090	sequence09:454..765(-)	partial			WP_109289924.1	IS3 family transposase	98.1	22.5	60.4
MGA_25	LOCUS_00120	sequence11:474..2510(-)	partial			WP_000216486.1	prophage tail fiber N-terminal domain-containing protein	38.2	28.2	26.8
MGA_28	LOCUS_00130	sequence12:1152..1277(-)	frameshift,internal_stop_codon	1152..1154(-)	1046	WP_165992825.1	IS3 family transposase	100.0	10.8	92.7
MGA_34	LOCUS_00170	sequence14:532..1533(+)	partial			WP_010880827.1	ATP-dependent Clp protease ATP-binding subunit	68.5	29.8	36.1
MGA_36	LOCUS_00190	sequence14:2972..3841(-)	frameshift		3882	WP_165992825.1	IS3 family transposase	99.0	75.1	68.2
MGA_37	LOCUS_00200	sequence14:3838..4113(-)	frameshift		3882	WP_165992825.1	IS3 family transposase	90.1	21.5	92.7
MGA_40	LOCUS_00230	sequence14:5187..5483(+)	partial			WP_010964056.1	exonuclease domain-containing protein	85.7	27.5	40.5
MGA_47	LOCUS_00290	sequence16:1..669(+)	partial			WP_165992825.1	IS3 family transposase	98.6	57.5	66.2
MGA_49	LOCUS_00310	sequence17:187..501(-)	partial			WP_003131629.1	recombinase RecA	100.0	28.4	58.2
MGA_50	LOCUS_00320	sequence17:663..929(+)	partial			WP_010774278.1	relaxase/mobilization nuclease domain-containing protein	90.9	13.2	51.2
MGA_51	LOCUS_00330	sequence17:1112..1588(+)	partial			WP_010905214.1	glycerophosphodiester phosphodiesterase family protein	87.3	32.1	45.3
MGA_58	LOCUS_00400	sequence17:5305..5562(+)	partial			WP_188367817.1	recombinase family protein	87.1	35.7	52.7
MGA_59	LOCUS_00410	sequence17:5815..6006(+)	frameshift		5791	WP_010905402.1	HU family DNA-binding protein	96.8	67.0	80.3
MGA_60	LOCUS_00420	sequence17:6202..6765(+)	frameshift		6666,6795	WP_153495214.1	IS3 family transposase	91.4	37.0	43.6
MGA_62	LOCUS_00440	sequence17:7593..7868(+)	frameshift		7823	WP_165992825.1	IS3 family transposase	89.0	21.3	93.8
MGA_79	LOCUS_00600	sequence19:3509..4051(-)	internal_stop_codon	4091..4093(-)		WP_002371849.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	93.3	26.0	56.6
MGA_80	LOCUS_00610	sequence19:4091..5476(-)	internal_stop_codon	4091..4093(-)		WP_002371849.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	100.0	70.1	63.3
MGA_95	LOCUS_00760	sequence21:4955..5677(+)	partial			WP_012582623.1	ParB/RepB/Spo0J family partition protein	66.7	65.1	28.1
MGA_99	LOCUS_00790	sequence22:2309..3046(+)	partial			WP_011102239.1	helix-turn-helix domain-containing protein	98.4	74.4	41.2
MGA_115	LOCUS_00940	sequence23:7007..7198(-)	frameshift		7191	WP_010753174.1	tyrosine-type recombinase/integrase	95.2	19.3	63.3
MGA_116	LOCUS_00950	sequence23:7546..9720(-)	partial			WP_010989422.1	MucBP domain-containing protein	80.4	41.1	33.2
MGA_159	LOCUS_01360	sequence26:9379..11511(+)	partial			WP_010905858.1	glycosyltransferase	68.2	58.7	52.4
MGA_169	LOCUS_01460	sequence26:20535..20957(+)	partial			WP_002302683.1	MarR family transcriptional regulator	78.6	71.4	49.1
MGA_186	LOCUS_01620	sequence27:18667..20250(-)	internal_stop_codon	20344..20346(-)		WP_011861581.1	alpha-amylase family glycosyl hydrolase	99.4	79.9	58.0
MGA_187	LOCUS_01630	sequence27:20344..20610(-)	internal_stop_codon	20344..20346(-)		WP_005787605.1	alpha amylase C-terminal domain-containing protein	96.6	12.8	44.8
MGA_221	LOCUS_01940	sequence29:4495..5439(-)	frameshift		5453	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	96.8	40.3	45.1
MGA_222	LOCUS_01950	sequence29:5448..6644(-)	frameshift		5453	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	99.5	55.4	45.3
MGA_228	LOCUS_02010	sequence29:9965..10729(+)	partial			WP_010965176.1	FtsK/SpoIIIE domain-containing protein	91.7	56.8	28.8
MGA_253	LOCUS_02250	sequence30:2291..3451(+)	partial			WP_000762954.1	DUF262 domain-containing protein	41.7	25.7	33.9
MGA_262	LOCUS_02340	sequence31:5964..6596(+)	partial			WP_011837300.1	helix-turn-helix transcriptional regulator	39.0	42.1	38.6
MGA_282	LOCUS_02540	sequence32:1..2413(+)	partial			WP_011109597.1	Ig-like domain-containing protein	96.1	42.8	42.2
MGA_316	LOCUS_02840	sequence35:8825..9583(+)	partial			WP_010963358.1	YiiX/YebB-like N1pC/P60 family cysteine hydrolase	60.7	62.7	37.7
MGA_332	LOCUS_03000	sequence35:25858..26211(-)	partial			WP_001031454.1	XRE family transcriptional regulator	82.1	43.0	48.0
MGA_334	LOCUS_03020	sequence35:26655..27296(+)	partial			WP_003131432.1	ATP-binding cassette domain-containing protein	95.8	44.2	75.2
MGA_335	LOCUS_03030	sequence35:27957..28502(+)	partial			WP_010905634.1	CDP-glycerol glycerophosphotransferase family protein	99.4	45.6	63.3
MGA_346	LOCUS_03130	sequence36:9116..9688(-)	partial			WP_010906169.1	hypothetical protein	94.7	47.8	63.4
MGA_351	LOCUS_03180	sequence36:12501..12896(-)	partial			WP_003437036.1	response regulator transcription factor	96.9	54.3	68.5
MGA_363	LOCUS_03300	sequence36:24853..25899(-)	partial			WP_002383740.1	aminoacyltransferase	67.8	55.2	29.8
MGA_372	LOCUS_03390	sequence36:33403..34059(-)	internal_stop_codon	34246..34248(-)		WP_010990053.1	sugar phosphorylase	96.8	38.2	50.0
MGA_373	LOCUS_03400	sequence36:34246..35058(-)	internal_stop_codon	34246..34248(-)		WP_010990053.1	sugar phosphorylase	85.6	41.4	60.8
MGA_375	LOCUS_03420	sequence36:37667..39028(-)	partial			WP_010990051.1	fructose-specific PTS transporter subunit EIIC	97.4	67.5	53.6
MGA_405	LOCUS_03710	sequence37:24200..24421(-)	partial			WP_010906243.1	MerR family transcriptional regulator	78.1	44.8	52.6
MGA_492	LOCUS_04570	sequence39:24987..25661(+)	partial			WP_010906040.1	WxL domain-containing protein	82.1	69.4	47.8
MGA_503	LOCUS_04680	sequence39:34985..36094(+)	partial			WP_010906038.1	hypothetical protein	89.2	20.6	32.9
MGA_512	LOCUS_04770	sequence39:45853..46827(+)	partial			WP_010922618.1	CHAP domain-containing protein	41.7	26.4	59.3
MGA_529	LOCUS_04940	sequence40:7516..8676(-)	partial			WP_011108305.1	family 20 glycosylhydrolase	50.3	31.6	25.8
MGA_536	LOCUS_05010	sequence40:13437..13652(-)	partial			WP_010906291.1	DUF1048 domain-containing protein	95.8	64.5	42.0
MGA_545	LOCUS_05100	sequence40:20610..21035(-)	partial			WP_003129531.1	DUF948 domain-containing protein	67.4	69.1	70.4
MGA_558	LOCUS_05230	sequence40:30652..31254(-)	partial			WP_021036818.1	L-threonylcarbamoyladenylate synthase	97.5	63.7	70.8
MGA_567	LOCUS_05320	sequence40:36798..37661(-)	partial			WP_011101160.1	bacterial Ig-like domain-containing protein	39.0	5.1	34.8
MGA_573	LOCUS_05380	sequence40:40641..40913(-)	partial			WP_003640632.1	Spx/MgsR family RNA polymerase-binding regulatory protein	94.4	61.7	37.6
MGA_586	LOCUS_05510	sequence40:53837..54586(-)	partial			WP_010905870.1	glutamate decarboxylase	96.4	51.5	89.2
MGA_588	LOCUS_05530	sequence40:55384..55671(+)	partial			WP_010989580.1	MarR family winged helix-turn-helix transcriptional regulator	100.0	63.3	46.3
MGA_637	LOCUS_06000	sequence41:48984..49184(-)	partial			WP_003131461.1	PspC domain-containing protein	97.0	41.6	62.5
MGA_639	LOCUS_06020	sequence41:50459..51961(-)	partial			WP_165379804.1	amidase domain-containing protein	62.0	64.3	58.1
MGA_645	LOCUS_06080	sequence41:58869..59360(-)	partial			WP_002384134.1	YcjF family protein	83.4	59.0	37.5
MGA_646	LOCUS_06090	sequence41:59736..60272(+)	internal_stop_codon	60270..60272(+)		WP_012544973.1	IS110 family transposase	93.8	40.8	32.4
MGA_647	LOCUS_06100	sequence41:60327..60896(+)	internal_stop_codon	60270..60272(+)		WP_011015895.1	IS110-like element ISFnu4 family transposase	95.8	46.5	40.7
MGA_648	LOCUS_06110	sequence41:61080..62615(-)	partial			WP_010990081.1	class 1 internalin InlJ	73.2	41.6	35.0
MGA_678	LOCUS_06400	sequence42:28296..29504(-)	partial			WP_011674714.1	C39 family peptidase	43.8	48.3	44.6
MGA_729	LOCUS_06880	sequence43:877..2112(+)	partial			WP_000301254.1	recombinase family protein	72.7	57.4	45.5
MGA_741	LOCUS_07000	sequence43:10788..11252(+)	internal_stop_codon	11250..11252(+)		WP_010906400.1	CHAP domain-containing protein	100.0	33.6	50.0
MGA_742	LOCUS_07010	sequence43:11292..11984(+)	partial			WP_000725225.1	CHAP domain-containing protein	41.3	38.4	43.9
MGA_767	LOCUS_07260	sequence43:34402..35085(+)	partial			WP_226319425.1	TIM44-like domain-containing protein	69.6	66.7	36.2
MGA_868	LOCUS_08260	sequence44:69294..69491(+)	partial			WP_213533719.1	PTS sugar transporter subunit IIC	92.3	14.0	44.6
MGA_870	LOCUS_08280	sequence45:53..1021(+)	partial			WP_003548819.1	LTA synthase family protein	95.7	33.2	28.1
MGA_873	LOCUS_08310	sequence45:2787..4478(+)	partial			WP_003242495.1	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	83.3	51.5	26.6
MGA_895	LOCUS_08530	sequence45:25133..25330(+)	partial			WP_002355534.1	1-phosphofructokinase	84.6	17.9	72.7
MGA_896	LOCUS_08540	sequence45:25314..25793(+)	partial			WP_010905540.1	HAD family phosphatase	95.6	68.5	46.1
MGA_915	LOCUS_08730	sequence45:45622..47850(+)	partial			WP_010990081.1	class 1 internalin InlJ	65.9	55.9	30.5
MGA_919	LOCUS_08770	sequence45:50386..51207(+)	frameshift		51201	WP_011071157.1	S8 family serine peptidase	93.8	35.4	35.1
MGA_933	LOCUS_08910	sequence45:62226..63266(+)	frameshift		63257	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	96.8	46.1	41.5
MGA_934	LOCUS_08920	sequence45:63250..64176(+)	frameshift		63257	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	98.4	41.7	33.0
MGA_967	LOCUS_09230	sequence46:22363..22884(+)	frameshift		22851	WP_011837294.1	DUF6287 domain-containing protein	47.4	17.8	36.6
MGA_1016	LOCUS_09720	sequence46:70109..70276(+)	frameshift		70107	WP_010905661.1	ABC transporter permease	96.4	9.8	47.2
MGA_1020	LOCUS_09760	sequence46:72685..73287(+)	partial			WP_010706863.1	DUF6287 domain-containing protein	61.5	44.1	46.0
MGA_1092	LOCUS_10480	sequence47:43010..43549(-)	partial			WP_012775474.1	folate family ECF transporter S component	74.9	73.8	32.6
MGA_1133	LOCUS_10890	sequence47:81852..82112(-)	partial			WP_010905055.1	Rha family transcriptional regulator	95.3	39.0	36.5
MGA_1165	LOCUS_11210	sequence47:109855..111246(-)	partial			WP_003244531.1	beta-glucanase	14.7	30.2	41.1
MGA_1172	LOCUS_11280	sequence48:2902..3777(-)	partial			WP_012775167.1	cation diffusion facilitator family transporter	98.3	69.4	52.1
MGA_1179	LOCUS_11350	sequence48:8578..9267(+)	partial			WP_011674714.1	C39 family peptidase	65.1	42.3	43.2
MGA_1180	LOCUS_11360	sequence48:9911..10405(+)	frameshift,internal_stop_codon	9641..9643(+)	9857,9897,9724,9815	WP_010905971.1	site-specific integrase	98.8	45.1	82.1
MGA_1221	LOCUS_11770	sequence48:48390..49418(-)	partial			WP_002369211.1	glycerophosphodiester phosphodiesterase	95.0	54.0	41.1
MGA_1241	LOCUS_11970	sequence48:66798..67745(+)	partial			WP_003569257.1	magnesium transporter CorA family protein	74.3	74.9	26.1
MGA_1279	LOCUS_12350	sequence49:15599..15781(+)	partial			WP_021723153.1	hypothetical protein	55.0	28.4	78.8
MGA_1287	LOCUS_12430	sequence49:22625..22915(-)	partial			WP_011836746.1	accessory Sec system glycosyltransferase GtfA	100.0	19.2	57.7
MGA_1323	LOCUS_12780	sequence50:36167..38275(-)	partial			WP_010990081.1	class 1 internalin InlJ	76.8	57.5	28.7
MGA_1364	LOCUS_13180	sequence51:30205..30567(-)	partial			WP_226319344.1	competence type IV pilus minor pilin ComGD	84.2	70.6	44.6
MGA_1369	LOCUS_13230	sequence51:32977..33153(-)	partial			WP_003129844.1	30S ribosomal protein S21	74.1	74.1	97.7
MGA_1371	LOCUS_13250	sequence51:34926..36380(+)	partial			WP_011674023.1	GW dipeptide domain-containing protein	46.3	21.9	38.8
MGA_1387	LOCUS_13410	sequence51:53705..54091(-)	partial			WP_002899995.1	DUF2142 domain-containing protein	89.1	25.1	30.7
MGA_1398	LOCUS_13520	sequence51:62592..63113(+)	frameshift		63392,63092	WP_010905210.1	glycosyltransferase family 4 protein	97.1	43.5	55.4
MGA_1399	LOCUS_13530	sequence51:63134..63397(+)	frameshift		63392,63092	WP_010905210.1	glycosyltransferase family 4 protein	92.0	21.1	57.5
MGA_1522	LOCUS_14760	sequence52:29223..29351(-)	partial			WP_011102204.1	6-phospho-beta-glucosidase	100.0	8.6	76.2
MGA_1549	LOCUS_15030	sequence52:59731..59964(-)	frameshift		59990	WP_003721726.1	DUF2200 domain-containing protein	93.5	67.2	57.0
MGA_1554	LOCUS_15070	sequence53:466..624(+)	frameshift		458	WP_003131545.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	100.0	13.8	90.4
MGA_1555	LOCUS_15080	sequence53:596..988(+)	frameshift		458	WP_003131545.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	88.5	30.4	53.9
MGA_1577	LOCUS_15300	sequence53:20028..20498(+)	internal_stop_codon	20496..20498(+)		WP_012775129.1	DNA-processing protein DprA	98.7	55.0	53.2
MGA_1578	LOCUS_15310	sequence53:20589..20897(+)	internal_stop_codon	20496..20498(+)		WP_001015240.1	DNA-processing protein DprA	91.2	32.9	65.6
MGA_1585	LOCUS_15380	sequence53:28411..28737(+)	frameshift		28731	WP_002288290.1	MerR family transcriptional regulator	82.4	61.8	65.2
MGA_1586	LOCUS_15390	sequence53:28676..28900(+)	frameshift		28731	WP_011460578.1	MerR family transcriptional regulator	75.7	35.9	41.1
MGA_1589	LOCUS_15420	sequence53:30785..32368(-)	frameshift		32373	WP_002387348.1	cation-transporting P-type ATPase	98.9	62.0	48.1
MGA_1590	LOCUS_15430	sequence53:32305..33297(-)	partial			WP_002287556.1	HAD-IC family P-type ATPase	93.6	36.2	46.0
MGA_1601	LOCUS_15540	sequence53:43643..44326(-)	partial			WP_010905550.1	hypothetical protein	59.9	57.3	40.3
MGA_1622	LOCUS_15750	sequence53:63972..65144(-)	partial			WP_002387476.1	family 20 glycosylhydrolase	99.0	46.7	57.8
MGA_1647	LOCUS_16000	sequence53:92776..93051(-)	frameshift		93080	WP_002355746.1	ring-cleaving dioxygenase	69.2	21.3	63.5
MGA_1648	LOCUS_16010	sequence53:93048..93671(-)	frameshift		93080	WP_010989561.1	VOC family protein	94.2	68.8	35.9
MGA_1657	LOCUS_16100	sequence53:100991..102370(-)	frameshift		102473	WP_003131601.1	sodium:proton antiporter	99.3	66.6	47.5
MGA_1658	LOCUS_16110	sequence53:102438..103049(-)	frameshift		102473	WP_003131601.1	sodium:proton antiporter	94.1	28.1	67.5
MGA_1661	LOCUS_16140	sequence53:104108..105205(-)	partial			WP_009896103.1	GGDEF domain-containing protein	43.6	26.4	35.6
MGA_1698	LOCUS_16510	sequence53:139528..140823(-)	partial			WP_011104962.1	SIR2 family protein	53.4	71.6	29.9
MGA_1720	LOCUS_16730	sequence54:17849..18886(-)	partial			WP_000156404.1	SGNH/GDSL hydrolase family protein	72.2	40.0	44.8
MGA_1750	LOCUS_17030	sequence54:40129..40866(-)	partial			WP_011475627.1	phage replisome organizer N-terminal domain-containing protein	41.2	34.9	40.0
MGA_1774	LOCUS_17270	sequence54:55167..55571(-)	partial			WP_010989637.1	methylated-DNA--[protein]-cysteine S-methyltransferase	73.1	62.3	47.5
MGA_1775	LOCUS_17280	sequence54:55561..56070(-)	partial			WP_013843861.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	93.5	43.2	38.3
MGA_1807	LOCUS_17600	sequence54:95754..98396(-)	partial			WP_002261981.1	LTA synthase family protein	72.2	74.2	40.0
MGA_1834	LOCUS_17870	sequence54:127510..132543(-)	partial			WP_010905155.1	SpaA isopeptide-forming pilin-related protein	20.8	16.1	29.1
MGA_1916	LOCUS_18690	sequence55:71614..73755(+)	partial			WP_004398589.1	PBP1A family penicillin-binding protein	77.1	58.9	28.7
MGA_1937	LOCUS_18890	sequence56:3717..4202(-)	frameshift		4354	WP_010906110.1	competence protein CoiA	95.0	46.5	40.5
MGA_1938	LOCUS_18900	sequence56:4199..4723(-)	frameshift		4354	WP_010906110.1	competence protein CoiA	73.6	39.5	56.9
MGA_1999	LOCUS_19510	sequence56:62254..63219(-)	frameshift		63341	WP_011836678.1	DNA internalization-related competence protein ComEC/Rec2	100.0	42.8	49.8
MGA_2000	LOCUS_19520	sequence56:64417..65010(-)	partial			WP_000387350.1	helix-hairpin-helix domain-containing protein	75.1	70.3	54.7
MGA_2013	LOCUS_19650	sequence56:84773..85021(-)	partial			WP_003130332.1	MGMT family protein	90.2	73.3	54.1
MGA_2030	LOCUS_19820	sequence56:105553..106152(+)	frameshift		106125	WP_141741171.1	IS3 family transposase	88.4	37.0	49.7
MGA_2031	LOCUS_19830	sequence56:106224..106949(+)	frameshift		106032	WP_153495214.1	IS3 family transposase	100.0	52.7	73.4