# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_7	LOCUS_00070	sequence01:2623..2955(+)	frameshift		3109,2925	WP_011331477.1	TraC family protein	95.5	12.7	33.3
MGA_11	LOCUS_00110	sequence01:4419..4649(+)	frameshift,internal_stop_codon	4413..4415(+)	4646	WP_001097733.1	group II intron reverse transcriptase/maturase	100.0	14.4	49.4
MGA_13	LOCUS_00130	sequence01:5446..6507(+)	frameshift		5402	WP_011024495.1	group II intron reverse transcriptase/maturase	98.3	83.1	52.7
MGA_14	LOCUS_00140	sequence01:7123..7410(+)	frameshift		7456,7395	WP_004597411.1	HD domain-containing protein	83.2	33.6	46.8
MGA_19	LOCUS_00190	sequence01:20643..21080(+)	frameshift,internal_stop_codon	20615..20617(+),20570..20572(+)	20626,20524	WP_000009324.1	type IV conjugative transfer system coupling protein TraD	100.0	20.2	42.8
MGA_20	LOCUS_00200	sequence01:21289..21897(+)	internal_stop_codon	21895..21897(+)		WP_139457934.1	IS256 family transposase	100.0	49.1	44.3
MGA_21	LOCUS_00210	sequence01:21955..22428(+)	internal_stop_codon	21895..21897(+)		WP_000343613.1	IS256-like element ISEc39 family transposase	97.5	38.8	55.1
MGA_23	LOCUS_00220	sequence02:321..716(-)	frameshift		718	WP_012544954.1	efflux RND transporter permease subunit	89.3	11.4	62.4
MGA_24	LOCUS_00230	sequence02:686..2917(-)	frameshift,internal_stop_codon	2977..2979(-)	717,2949	WP_011144016.1	multidrug efflux RND transporter permease subunit	99.9	69.5	49.5
MGA_25	LOCUS_00240	sequence02:2977..3504(-)	frameshift,internal_stop_codon	2977..2979(-)	2955	WP_010937745.1	efflux RND transporter permease subunit	100.0	16.8	65.7
MGA_27	LOCUS_00260	sequence02:3770..4771(-)	frameshift		3844	WP_012546440.1	efflux RND transporter periplasmic adaptor subunit	82.6	76.5	43.7
MGA_31	LOCUS_00300	sequence02:8166..8576(-)	frameshift		8174	WP_008764795.1	Rpn family recombination-promoting nuclease/putative transposase	75.7	36.9	39.8
MGA_59	LOCUS_00580	sequence02:36841..37368(+)	frameshift,internal_stop_codon	37561..37563(+)	37359	WP_004599472.1	hypothetical protein	98.9	45.0	57.3
MGA_79	LOCUS_00780	sequence02:60220..61224(+)	frameshift		61203,61218,61227,61221	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	96.7	14.6	64.3
MGA_80	LOCUS_00790	sequence02:61319..61621(+)	frameshift		61617,61218,61221,61879,61227,61615	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	98.0	4.2	43.4
MGA_81	LOCUS_00800	sequence02:61723..61899(+)	frameshift		61879,61875,61615	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	94.8	2.4	74.5
MGA_82	LOCUS_00810	sequence02:62022..62663(+)	frameshift		62755,62373,61878,62392,62653	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	98.6	8.9	72.6
MGA_83	LOCUS_00820	sequence02:62815..63384(+)	frameshift		63377,62756,63429,62654	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	99.5	8.1	75.3
MGA_84	LOCUS_00830	sequence02:63804..64241(+)	frameshift		64530,64238	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	77.2	4.8	73.2
MGA_85	LOCUS_00840	sequence02:64228..64575(+)	frameshift		64530,64238	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	85.2	4.2	86.7
MGA_86	LOCUS_00850	sequence02:64659..65093(+)	frameshift		64530	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	100.0	6.2	83.3
MGA_91	LOCUS_00900	sequence02:68556..68936(+)	frameshift		68921	WP_004597783.1	gamma carbonic anhydrase family protein	96.8	65.9	84.4
MGA_136	LOCUS_01350	sequence02:117169..117387(+)	frameshift		117375	WP_011337911.1	HK97 family phage prohead protease	93.1	39.7	42.0
MGA_137	LOCUS_01360	sequence02:117375..118388(+)	frameshift		118421,118295	WP_012640585.1	phage major capsid protein	78.9	72.7	29.5
MGA_156	LOCUS_01550	sequence02:133899..134597(+)	partial			WP_011205298.1	site-specific integrase	80.6	68.0	32.8
MGA_157	LOCUS_01560	sequence02:134800..135402(+)	partial			WP_003695998.1	DUF4065 domain-containing protein	60.0	66.5	37.5
MGA_169	LOCUS_01680	sequence02:143394..143816(+)	partial			WP_011331483.1	type-F conjugative transfer system pilin assembly protein TrbC	69.3	46.8	33.3
MGA_170	LOCUS_01690	sequence02:143813..145582(+)	partial			WP_010947796.1	type-F conjugative transfer system mating-pair stabilization protein TraN	52.0	52.7	34.0
MGA_174	LOCUS_01730	sequence02:149163..150059(+)	partial			WP_010875712.1	tetratricopeptide repeat protein	97.7	72.2	34.4
MGA_175	LOCUS_01740	sequence02:150064..151518(+)	frameshift		151515	WP_000009324.1	type IV conjugative transfer system coupling protein TraD	98.8	66.9	27.0
MGA_182	LOCUS_01760	sequence05:1086..1376(+)	frameshift		946,939	WP_001097733.1	group II intron reverse transcriptase/maturase	99.0	18.2	45.5
MGA_184	LOCUS_01780	sequence05:2241..2639(+)	partial			WP_000336726.1	IS3 family transposase	94.7	46.0	44.0
MGA_187	LOCUS_01810	sequence05:4160..4540(+)	partial			WP_102990622.1	IS3 family transposase	95.2	30.7	56.7
MGA_191	LOCUS_01840	sequence06:1838..2590(+)	frameshift		2569,1806	WP_004599394.1	MFS transporter	99.6	57.5	42.6
MGA_192	LOCUS_01850	sequence06:2521..2946(+)	frameshift		2572	WP_004599394.1	MFS transporter	81.6	26.3	41.7
MGA_195	LOCUS_01880	sequence06:5342..7033(-)	partial			WP_010957294.1	ankyrin repeat domain-containing protein	70.9	49.1	28.6
MGA_196	LOCUS_01890	sequence06:7243..8268(-)	partial			WP_193385014.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	86.8	41.7	30.9
MGA_199	LOCUS_01920	sequence06:9206..10165(-)	partial			WP_003114254.1	ATP-binding protein	75.5	36.1	26.6
MGA_200	LOCUS_01930	sequence06:10486..10743(+)	frameshift		10719	WP_011837306.1	DNA adenine methylase	72.9	17.8	40.3
MGA_201	LOCUS_01940	sequence06:10719..11360(+)	frameshift		10719	WP_011837306.1	DNA adenine methylase	97.7	78.3	33.3
MGA_211	LOCUS_02040	sequence06:19924..20547(-)	partial			WP_000280345.1	RNA methyltransferase	84.5	56.3	29.0
MGA_231	LOCUS_02240	sequence07:16770..17258(+)	frameshift		17192	WP_004599449.1	LD-carboxypeptidase	87.7	47.3	34.7
MGA_245	LOCUS_02380	sequence07:28051..28437(+)	frameshift		28524,28413	WP_004597718.1	glycosyltransferase family 8 protein	96.1	25.2	78.0
MGA_246	LOCUS_02390	sequence07:28520..28939(+)	frameshift		29073,28419,28527	WP_004597718.1	glycosyltransferase family 8 protein	98.6	28.0	86.1
MGA_247	LOCUS_02400	sequence07:29082..29375(+)	frameshift		29073	WP_004597718.1	glycosyltransferase family 8 protein	97.9	19.4	85.3
MGA_257	LOCUS_02500	sequence07:41417..41800(-)	partial			WP_005496331.1	Fe-S cluster assembly transcriptional regulator IscR	95.3	70.2	41.3
MGA_273	LOCUS_02660	sequence07:56945..57241(+)	frameshift		57178	WP_000660194.1	MDR family MFS transporter	66.3	13.7	36.9
MGA_274	LOCUS_02670	sequence07:57168..57635(+)	partial			WP_013532287.1	DHA2 family efflux MFS transporter permease subunit	73.5	24.4	36.5
MGA_277	LOCUS_02700	sequence07:60621..61388(-)	frameshift		61664,61516	WP_001562965.1	tyrosine transporter TyrP	69.0	42.9	33.1
MGA_279	LOCUS_02720	sequence07:62789..65662(+)	partial			WP_011056728.1	pentapeptide repeat-containing protein	15.7	74.2	27.3
MGA_299	LOCUS_02920	sequence07:81697..82413(-)	frameshift		82098	WP_000031032.1	phosphatase PAP2 family protein	44.1	34.3	36.5
MGA_303	LOCUS_02960	sequence07:85178..85468(+)	partial			WP_010947674.1	Dot/Icm T4SS effector LegL5	68.8	12.5	42.6
MGA_328	LOCUS_03210	sequence07:109700..109927(-)	frameshift		109711	WP_010974604.1	Fic family protein	98.7	20.1	45.9
MGA_331	LOCUS_03240	sequence07:110545..112626(-)	partial			WP_004597883.1	excinuclease ABC subunit UvrC	63.5	70.3	79.5
MGA_333	LOCUS_03260	sequence07:113271..113792(-)	partial			WP_010932971.1	DNA alkylation repair protein	98.3	74.1	47.7
MGA_335	LOCUS_03280	sequence07:115082..115390(-)	frameshift		115475	WP_015444602.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	99.0	28.5	65.3
MGA_338	LOCUS_03310	sequence07:117270..117938(-)	partial			WP_011038029.1	HsdR family type I site-specific deoxyribonuclease	84.2	17.2	41.7
MGA_339	LOCUS_03320	sequence07:117886..118422(-)	frameshift		118463	WP_041594898.1	HsdR family type I site-specific deoxyribonuclease	88.2	16.0	43.2
MGA_343	LOCUS_03360	sequence07:119473..120588(-)	partial			WP_162685290.1	restriction endonuclease subunit S	40.7	40.0	32.1
MGA_344	LOCUS_03370	sequence07:120991..121398(-)	frameshift,internal_stop_codon	120911..120913(-)	121010,121628	WP_011038026.1	type I restriction-modification system subunit M	92.6	24.9	68.0
MGA_345	LOCUS_03380	sequence07:121617..122096(-)	frameshift		121628	WP_010938997.1	type I restriction-modification system subunit M	98.1	30.6	49.4
MGA_366	LOCUS_03590	sequence08:862..1284(-)	frameshift		1363	WP_011109297.1	HEPN domain-containing protein	98.6	46.8	45.3
MGA_377	LOCUS_03700	sequence08:13928..14329(+)	frameshift		14320	WP_004597411.1	HD domain-containing protein	100.0	56.6	66.9
MGA_381	LOCUS_03740	sequence08:15373..15525(-)	frameshift,internal_stop_codon	15373..15375(-)	15568	WP_004599394.1	MFS transporter	100.0	11.4	52.0
MGA_382	LOCUS_03750	sequence08:15518..15715(-)	frameshift,internal_stop_codon	15373..15375(-)	15568	WP_004599394.1	MFS transporter	75.4	11.2	67.3
MGA_405	LOCUS_03980	sequence08:40954..41265(+)	frameshift		41272,40882,41235	WP_010886332.1	rhodanese-like domain-containing protein	53.4	61.8	51.3
MGA_412	LOCUS_04050	sequence08:47406..47795(-)	frameshift		47821	WP_004598986.1	MFS transporter	100.0	31.7	76.7
MGA_413	LOCUS_04060	sequence08:47786..48223(-)	frameshift		48177,47823	WP_004598986.1	MFS transporter	97.9	35.6	74.5
MGA_414	LOCUS_04070	sequence08:48163..48612(-)	frameshift		48553,48563,48183	WP_004598986.1	MFS transporter	95.3	34.9	73.9
MGA_427	LOCUS_04200	sequence08:58157..58630(-)	frameshift		58619,58844	WP_011815761.1	DUF2157 domain-containing protein	96.8	43.3	55.3
MGA_430	LOCUS_04220	sequence08:61475..62161(-)	frameshift,internal_stop_codon	62292..62294(-)	62360,62279	WP_011140584.1	S9 family peptidase	99.1	34.6	50.0
MGA_458	LOCUS_04500	sequence08:90173..90346(-)	frameshift		90438,90183	WP_011035918.1	glycosyltransferase family 2 protein	96.5	8.7	50.9
MGA_459	LOCUS_04510	sequence08:90421..90747(-)	frameshift		90438,90183	WP_011035918.1	glycosyltransferase family 2 protein	77.8	14.0	42.7
MGA_468	LOCUS_04600	sequence08:96673..97155(+)	frameshift,internal_stop_codon	96610..96612(+),97303..97305(+)	97140	WP_004599394.1	MFS transporter	98.8	36.8	39.3
MGA_473	LOCUS_04650	sequence08:99895..100377(+)	frameshift		100482,100323	WP_004599394.1	MFS transporter	89.4	32.6	61.5
MGA_474	LOCUS_04660	sequence08:100420..100983(+)	frameshift,internal_stop_codon	100982..100984(+)	101032,100482,100323	WP_004599394.1	MFS transporter	68.4	29.0	35.9
MGA_476	LOCUS_04680	sequence08:101468..101722(-)	frameshift		101505,101811	WP_004597411.1	HD domain-containing protein	92.9	33.2	78.2
MGA_513	LOCUS_05050	sequence08:124395..124913(+)	partial			WP_000849212.1	serine protease inhibitor ecotin	57.6	60.5	55.6
MGA_518	LOCUS_05100	sequence08:130078..130728(+)	partial			WP_011015826.1	tetratricopeptide repeat protein	87.0	28.8	33.0
MGA_523	LOCUS_05150	sequence08:133470..133727(-)	frameshift		133816,133513	WP_004599394.1	MFS transporter	82.4	16.0	48.6
MGA_524	LOCUS_05160	sequence08:133772..134515(-)	frameshift		133816,133513,134522,134595	WP_004599394.1	MFS transporter	96.0	55.0	40.9
MGA_542	LOCUS_05340	sequence08:151692..152816(+)	partial			WP_000009019.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	94.1	74.3	28.8
MGA_544	LOCUS_05360	sequence08:153277..153513(+)	partial			WP_004599529.1	hypothetical protein	64.1	63.8	56.9
MGA_545	LOCUS_05370	sequence08:153703..154503(-)	frameshift		154526	WP_010886344.1	polyhydroxyalkanoate depolymerase	96.6	60.8	88.7
MGA_546	LOCUS_05380	sequence08:154515..154850(-)	frameshift		154526	WP_010886344.1	polyhydroxyalkanoate depolymerase	97.3	25.5	87.0
MGA_547	LOCUS_05390	sequence08:154986..155555(-)	partial			WP_003114400.1	COG2958 family protein	84.1	49.5	52.2
MGA_555	LOCUS_05470	sequence08:161976..162458(+)	frameshift,internal_stop_codon	161943..161945(+),162456..162458(+)	162563	WP_103897029.1	Rpn family recombination-promoting nuclease/putative transposase	99.4	47.8	34.5
MGA_558	LOCUS_05500	sequence08:166075..166674(+)	frameshift		166644,166668	WP_010886346.1	LicD family protein	95.5	63.6	84.9
MGA_559	LOCUS_05510	sequence08:166913..167698(-)	partial			WP_011068541.1	DUF4143 domain-containing protein	67.8	67.1	27.3
MGA_564	LOCUS_05560	sequence08:170378..170794(+)	partial			WP_000487430.1	glycosyltransferase family 10	60.1	17.0	37.3
MGA_565	LOCUS_05570	sequence08:170794..171615(+)	partial			WP_001263320.1	glycosyltransferase family 25 protein	54.9	51.4	33.1
MGA_566	LOCUS_05580	sequence08:171800..172327(-)	frameshift		172266	WP_010886349.1	hypothetical protein	89.1	24.4	85.0
MGA_567	LOCUS_05590	sequence08:172246..172959(-)	frameshift		173096,172267,173093,173039	WP_010886349.1	hypothetical protein	97.9	35.4	78.0
MGA_568	LOCUS_05600	sequence08:173067..173297(-)	frameshift		173096,173283,173093,173039	WP_010886349.1	hypothetical protein	86.8	10.1	59.1
MGA_569	LOCUS_05610	sequence08:173263..173697(-)	frameshift		173096,173099,173042,173283	WP_010886349.1	hypothetical protein	95.1	20.9	71.5
MGA_570	LOCUS_05620	sequence08:174214..174681(+)	frameshift,internal_stop_codon	174030..174032(+),174917..174919(+)	174221,174567	WP_010947032.1	NAD(P)H-binding protein	77.4	27.3	46.7
MGA_579	LOCUS_05710	sequence08:182108..182305(+)	frameshift,internal_stop_codon	182450..182452(+),182543..182545(+)	182290	WP_010886352.1	multidrug effflux MFS transporter	93.8	15.6	86.9
MGA_580	LOCUS_05720	sequence08:182275..182451(+)	frameshift,internal_stop_codon	182450..182452(+),182543..182545(+)	182290	WP_010886352.1	multidrug effflux MFS transporter	91.4	13.6	79.2
MGA_581	LOCUS_05730	sequence08:182560..183192(+)	frameshift,internal_stop_codon	182450..182452(+),182543..182545(+)	183136,182290	WP_010886352.1	multidrug effflux MFS transporter	83.8	45.0	87.5
MGA_585	LOCUS_05770	sequence08:187723..188400(+)	partial			WP_011015826.1	tetratricopeptide repeat protein	80.4	26.1	29.3
MGA_586	LOCUS_05780	sequence08:188601..188777(-)	frameshift,internal_stop_codon	188478..188480(-),188541..188543(-)	188604,188868,188862	WP_004598523.1	cell division protein FtsA	98.3	13.9	73.7
MGA_587	LOCUS_05790	sequence08:188860..189045(-)	frameshift		188604,188868,188862	WP_004598523.1	cell division protein FtsA	91.8	13.6	71.4
MGA_590	LOCUS_05820	sequence08:191534..192376(+)	partial			WP_004598889.1	heme lyase CcmF/NrfE family subunit	99.6	41.6	77.4
MGA_597	LOCUS_05890	sequence08:200547..201152(-)	partial			WP_009561565.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	78.6	21.1	37.7
MGA_599	LOCUS_05910	sequence08:202671..203015(-)	partial			WP_010886355.1	HU family DNA-binding protein	62.3	74.7	85.9
MGA_606	LOCUS_05980	sequence08:206593..207540(-)	partial			WP_023003304.1	M23 family metallopeptidase	32.1	34.2	49.5
MGA_609	LOCUS_06010	sequence08:208582..208764(-)	frameshift		209030	WP_011070741.1	RhuM family protein	98.3	19.3	54.7
MGA_610	LOCUS_06020	sequence08:209016..209549(-)	frameshift		209036	WP_011070741.1	RhuM family protein	92.1	48.8	48.5
MGA_616	LOCUS_06080	sequence08:214460..214870(+)	frameshift		214266,214437	WP_004597411.1	HD domain-containing protein	63.2	36.6	74.4
MGA_617	LOCUS_06090	sequence08:215419..215808(-)	frameshift		216032,215822,215951	WP_010958628.1	MFS transporter	95.3	29.1	32.6
MGA_620	LOCUS_06120	sequence08:217359..217649(-)	partial			WP_004597055.1	hypothetical protein	94.8	61.5	78.0
MGA_641	LOCUS_06330	sequence08:235177..236412(-)	partial			WP_011038245.1	ATP-binding protein	92.9	33.9	31.9
MGA_647	LOCUS_06390	sequence08:240623..240919(-)	frameshift		240932,240966	WP_004599629.1	alpha/beta hydrolase	100.0	28.9	86.7
MGA_648	LOCUS_06400	sequence08:240964..241284(-)	frameshift,internal_stop_codon	240964..240966(-)	240932,240957,241375	WP_004599629.1	alpha/beta hydrolase	100.0	31.3	84.9
MGA_649	LOCUS_06410	sequence08:241370..241537(-)	frameshift		241375	WP_004599629.1	alpha/beta hydrolase	98.2	15.9	83.3
MGA_669	LOCUS_06610	sequence08:257538..257927(+)	frameshift		257912,258021	WP_014330138.1	MBL fold metallo-hydrolase	45.0	17.5	63.8
MGA_672	LOCUS_06640	sequence08:259234..259815(-)	partial			WP_005308463.1	glycine zipper 2TM domain-containing protein	56.0	69.0	33.9
MGA_681	LOCUS_06730	sequence08:271096..271818(-)	frameshift,internal_stop_codon	271096..271098(-)	271909	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	100.0	47.5	30.2
MGA_682	LOCUS_06740	sequence08:271880..272374(-)	frameshift		271912	WP_011027955.1	MFS transporter	93.9	28.8	48.7
MGA_688	LOCUS_06800	sequence08:278181..279266(+)	partial			WP_010948192.1	Dot/Icm T4SS GTPase-activating effector LepB	79.8	22.1	22.4
MGA_703	LOCUS_06950	sequence08:292765..293109(+)	frameshift,internal_stop_codon	292696..292698(+),293107..293109(+)	293217	WP_010958613.1	methionine adenosyltransferase	100.0	29.0	59.6
MGA_704	LOCUS_06960	sequence08:293342..294385(+)	frameshift,internal_stop_codon	293107..293109(+)	293217	WP_003432462.1	methionine adenosyltransferase	30.5	26.7	63.2
MGA_715	LOCUS_07070	sequence08:315043..315402(+)	frameshift		315378	WP_004596929.1	outer membrane beta-barrel protein	85.7	43.0	80.4
MGA_716	LOCUS_07080	sequence08:315383..315754(+)	frameshift		315378	WP_004596929.1	outer membrane beta-barrel protein	100.0	51.9	81.3
MGA_722	LOCUS_07130	sequence09:1..1092(+)	partial			WP_004596922.1	NADH-quinone oxidoreductase subunit L	99.4	55.6	81.0
MGA_742	LOCUS_07330	sequence09:20130..20525(-)	frameshift		20554,20155	WP_015444455.1	class D beta-lactamase	94.7	46.2	58.9
MGA_743	LOCUS_07340	sequence09:20522..20806(-)	frameshift		20554	WP_015444455.1	class D beta-lactamase	95.7	34.2	50.5
MGA_747	LOCUS_07370	sequence10:391..651(+)	frameshift		307	WP_164926104.1	ATP-binding protein	93.0	20.7	42.5
MGA_748	LOCUS_07380	sequence10:897..1319(-)	internal_stop_codon	1320..1322(-)		WP_011109297.1	HEPN domain-containing protein	98.6	46.8	50.4
MGA_764	LOCUS_07540	sequence10:12143..12295(+)	internal_stop_codon	12293..12295(+)		WP_004599664.1	phasin family protein	100.0	31.4	74.0
MGA_765	LOCUS_07550	sequence10:12311..12622(+)	internal_stop_codon	12293..12295(+)		WP_004599664.1	phasin family protein	100.0	64.8	80.6
MGA_767	LOCUS_07570	sequence10:13574..14623(-)	frameshift		14727	WP_004599665.1	class I poly(R)-hydroxyalkanoic acid synthase	100.0	60.4	84.4
MGA_768	LOCUS_07580	sequence10:14710..15111(-)	frameshift		15104,14729	WP_004599665.1	class I poly(R)-hydroxyalkanoic acid synthase	95.5	21.7	85.0
MGA_771	LOCUS_07610	sequence10:18946..>22245(-)	partial			WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	62.5	29.4	33.1
MGA_795	LOCUS_07840	sequence11:20850..21215(+)	frameshift,internal_stop_codon	21217..21219(+),21214..21216(+)	20928,21327	WP_004599394.1	MFS transporter	69.4	19.2	64.3
MGA_796	LOCUS_07850	sequence11:21942..22241(+)	frameshift		21795	WP_004599394.1	MFS transporter	79.8	18.0	36.7
MGA_811	LOCUS_08000	sequence11:37032..38270(+)	frameshift		38267	WP_004599678.1	bifunctional peptide chain release factor N(5)-glutamine methyltransferase PrmC/tRNA (guanosine(46)-N7)-methyltransferase TrmB	100.0	77.4	73.4
MGA_844	LOCUS_08330	sequence11:71068..71256(-)	frameshift		71282,71069	WP_083500625.1	restriction endonuclease subunit S	100.0	14.6	56.5
MGA_845	LOCUS_08340	sequence11:71229..71789(-)	frameshift		71760	WP_010890088.1	restriction endonuclease subunit S	81.7	40.5	32.0
MGA_849	LOCUS_08380	sequence11:73610..73963(+)	frameshift		74153,73900	WP_011107366.1	Na+/H+ antiporter NhaA	87.2	25.5	34.5
MGA_850	LOCUS_08390	sequence11:73947..74171(+)	frameshift		73900,74165	WP_011268892.1	Na+/H+ antiporter NhaA	97.3	18.4	44.4
MGA_851	LOCUS_08400	sequence11:74195..74788(+)	frameshift		74165	WP_002799206.1	Na+/H+ antiporter NhaA	97.0	49.0	42.2
MGA_859	LOCUS_08480	sequence11:80188..80652(+)	frameshift		80752,80580,80854,80700	WP_010972217.1	3-hydroxybutyrate dehydrogenase	85.1	50.8	45.8
MGA_887	LOCUS_08760	sequence12:20858..21184(-)	frameshift		21221,20878	WP_063921625.1	ComEC/Rec2 family competence protein	95.4	13.4	29.1
MGA_889	LOCUS_08780	sequence12:22434..27383(+)	partial			WP_011190491.1	autotransporter outer membrane beta-barrel domain-containing protein	28.3	40.0	70.7
MGA_917	LOCUS_09060	sequence12:48461..49141(+)	frameshift,internal_stop_codon	48323..48325(+)	49090,49270	WP_147141400.1	autotransporter domain-containing protein	92.0	12.4	28.2
MGA_918	LOCUS_09070	sequence12:49331..49675(+)	frameshift		49269	WP_147141400.1	autotransporter domain-containing protein	88.6	6.3	35.9
MGA_936	LOCUS_09240	sequence13:5099..6706(+)	partial			WP_004596638.1	tRNA lysidine(34) synthetase TilS	41.5	51.6	87.8
MGA_947	LOCUS_09350	sequence14:10825..11019(+)	frameshift		10974	WP_011071613.1	class I SAM-dependent methyltransferase	78.1	26.0	48.0
MGA_948	LOCUS_09360	sequence14:10949..11416(+)	frameshift		10974	WP_011976089.1	class I SAM-dependent methyltransferase	56.8	43.8	36.4
MGA_951	LOCUS_09390	sequence14:12849..13115(-)	internal_stop_codon	13137..13139(-)		WP_004193946.1	peptide deformylase	87.5	43.5	41.6
MGA_988	LOCUS_09760	sequence14:48168..48530(+)	frameshift		48515	WP_010883678.1	queuosine precursor transporter	70.8	36.1	32.6
MGA_989	LOCUS_09770	sequence14:48874..54327(-)	partial			WP_147141400.1	autotransporter domain-containing protein	27.2	29.3	68.8
MGA_1001	LOCUS_09890	sequence14:66003..66284(+)	internal_stop_codon	66282..66284(+)		WP_011976384.1	ribose-phosphate pyrophosphokinase	100.0	30.0	50.5
MGA_1002	LOCUS_09900	sequence14:66637..67020(+)	partial			WP_103897643.1	DUF1674 domain-containing protein	34.6	47.3	61.4
MGA_1018	LOCUS_10060	sequence14:91006..91311(+)	frameshift		91296,91419	WP_004597142.1	phosphate acetyltransferase	93.1	26.8	87.2
MGA_1019	LOCUS_10070	sequence14:91439..91996(+)	frameshift		91296,91419	WP_004597142.1	phosphate acetyltransferase	97.3	51.3	96.7
MGA_1020	LOCUS_10080	sequence14:92056..93081(+)	frameshift		93054,92102	WP_004597143.1	acetate/propionate family kinase	95.0	83.9	81.8
MGA_1034	LOCUS_10220	sequence14:103804..104088(-)	partial			WP_103897643.1	DUF1674 domain-containing protein	54.3	54.8	56.9
MGA_1059	LOCUS_10470	sequence14:135357..135548(-)	frameshift		135684	WP_014408233.1	hypothetical protein	100.0	8.9	96.8
MGA_1060	LOCUS_10480	sequence14:135673..136815(-)	frameshift,internal_stop_codon	136870..136872(-)	136986,135683,136818	WP_014408233.1	hypothetical protein	99.5	53.7	91.5
MGA_1061	LOCUS_10490	sequence14:136927..137385(-)	frameshift,internal_stop_codon	136870..136872(-)	137344,136986,136818	WP_014408233.1	hypothetical protein	78.3	16.9	95.0
MGA_1086	LOCUS_10740	sequence14:159163..159297(-)	partial			WP_103897643.1	DUF1674 domain-containing protein	93.2	44.1	92.7
MGA_1088	LOCUS_10760	sequence14:160401..160739(-)	frameshift		160721,160859	WP_010886224.1	efflux RND transporter permease subunit	90.2	10.0	89.1
MGA_1089	LOCUS_10770	sequence14:160833..161549(-)	frameshift,internal_stop_codon	161565..161567(-)	160724,160862	WP_010886224.1	efflux RND transporter permease subunit	99.2	23.2	82.6
MGA_1090	LOCUS_10780	sequence14:161565..163043(-)	frameshift,internal_stop_codon	161565..161567(-)	163029	WP_010886224.1	efflux RND transporter permease subunit	82.9	40.5	80.8
MGA_1091	LOCUS_10790	sequence14:162973..163200(-)	frameshift		163029	WP_010886224.1	efflux RND transporter permease subunit	80.0	5.8	80.0
MGA_1127	LOCUS_11150	sequence15:9352..10254(-)	partial			WP_011190656.1	penicillin-binding protein 1C	97.3	37.5	83.6
MGA_1132	LOCUS_11200	sequence15:13689..14627(+)	frameshift,internal_stop_codon	14689..14691(+)	14664,14585,14844	WP_011190491.1	autotransporter outer membrane beta-barrel domain-containing protein	43.9	12.7	35.6
MGA_1133	LOCUS_11210	sequence15:14834..15010(+)	frameshift,internal_stop_codon	14689..14691(+)	14664,14850,14582	WP_147141400.1	autotransporter domain-containing protein	91.4	3.3	58.5
MGA_1149	LOCUS_11370	sequence15:30869..31264(+)	frameshift		30867	WP_012048226.1	dicarboxylate/amino acid:cation symporter	99.2	32.0	28.5
MGA_1172	LOCUS_11600	sequence15:56559..56813(+)	frameshift		56899,56789,56799	WP_014206581.1	ABC transporter ATP-binding protein	90.5	12.2	53.9
MGA_1173	LOCUS_11610	sequence15:57064..57324(+)	frameshift		56899	WP_010980767.1	ABC transporter ATP-binding protein	100.0	13.4	52.3
MGA_1188	LOCUS_11760	sequence15:74123..74380(+)	frameshift,internal_stop_codon	74378..74380(+)	74485	WP_013222589.1	M15 family metallopeptidase	91.8	29.9	50.0
MGA_1189	LOCUS_11770	sequence15:74569..74817(+)	frameshift,internal_stop_codon	74378..74380(+)	74485	WP_013222589.1	M15 family metallopeptidase	85.4	26.8	42.9
MGA_1240	LOCUS_12270	sequence16:3236..4093(-)	frameshift		4274	WP_010886252.1	peptide chain release factor 2	100.0	77.2	90.2
MGA_1245	LOCUS_12300	sequence17:1217..1510(+)	frameshift		1490,1178	WP_004597411.1	HD domain-containing protein	94.8	39.1	68.5
MGA_1247	LOCUS_12320	sequence17:1715..2626(-)	frameshift		2689,2794	WP_004599394.1	MFS transporter	97.7	69.2	37.2
MGA_1248	LOCUS_12330	sequence17:2789..3010(-)	frameshift		2689,2797	WP_004599394.1	MFS transporter	98.6	16.4	66.7
MGA_1269	LOCUS_12540	sequence17:23122..23688(+)	partial			WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	97.3	7.8	65.0
MGA_1273	LOCUS_12580	sequence17:25585..26061(-)	frameshift		26257,26023	WP_011337519.1	glycoside hydrolase TIM-barrel-like domain-containing protein	74.1	8.8	26.5
MGA_1275	LOCUS_12600	sequence17:27114..27791(-)	internal_stop_codon	27114..27116(-)		WP_010971295.1	glycoside hydrolase TIM-barrel-like domain-containing protein	97.3	16.0	37.9
MGA_1278	LOCUS_12630	sequence17:29702..30082(+)	frameshift,internal_stop_codon	30371..30373(+)	30046	WP_004597379.1	3'(2'),5'-bisphosphate nucleotidase CysQ	91.3	43.9	91.3
MGA_1291	LOCUS_12760	sequence17:45530..46405(+)	partial			WP_013097447.1	ABC-F family ATPase	83.2	45.4	44.6
MGA_1297	LOCUS_12820	sequence17:48238..48795(-)	frameshift		48841,48252	WP_010957791.1	ATP-binding protein	94.6	47.0	37.7
MGA_1313	LOCUS_12980	sequence17:62844..63119(+)	partial			WP_011083488.1	YifB family Mg chelatase-like AAA ATPase	100.0	17.8	52.7
MGA_1314	LOCUS_12990	sequence17:63098..63808(+)	frameshift		64048,63793,63991	WP_013528602.1	YifB family Mg chelatase-like AAA ATPase	94.9	43.5	54.5
MGA_1317	LOCUS_13020	sequence17:64753..65172(+)	frameshift		64754,65117,64655	WP_011203118.1	Rpn family recombination-promoting nuclease/putative transposase	85.6	38.0	32.8
MGA_1332	LOCUS_13170	sequence17:76807..77250(-)	frameshift		76736,76802,76854	WP_010971531.1	DNA-processing protein DprA	85.0	32.6	42.4
MGA_1341	LOCUS_13260	sequence17:84815..86161(+)	partial			WP_011461005.1	glycosyltransferase	69.9	38.3	26.2
MGA_1344	LOCUS_13280	sequence18:1..1446(+)	partial			WP_004599412.1	glycosyltransferase	34.3	51.6	52.1
MGA_1345	LOCUS_13290	sequence18:1451..1819(-)	frameshift		1769	WP_014411683.1	efflux RND transporter periplasmic adaptor subunit	86.9	32.2	83.2
MGA_1346	LOCUS_13300	sequence18:1749..2405(-)	frameshift		1769	WP_014411683.1	efflux RND transporter periplasmic adaptor subunit	97.7	68.1	79.2
MGA_1357	LOCUS_13410	sequence18:10006..10785(-)	frameshift		10732	WP_003971741.1	spore photoproduct lyase family protein	91.1	60.8	41.2
MGA_1358	LOCUS_13420	sequence18:10987..11370(+)	frameshift		11346	WP_126352787.1	DUF4385 domain-containing protein	85.8	60.1	60.9
MGA_1365	LOCUS_13490	sequence18:16526..16783(+)	partial			WP_103897029.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	28.1	41.5
MGA_1378	LOCUS_13620	sequence18:26735..27622(-)	partial			WP_004597496.1	O-antigen ligase	100.0	60.7	58.5
MGA_1380	LOCUS_13640	sequence18:28822..29655(+)	partial			WP_003697216.1	phage terminase large subunit	97.8	55.8	30.7
MGA_1389	LOCUS_13730	sequence18:38584..38802(+)	frameshift,internal_stop_codon	38888..38890(+)	38770,38986,38542	WP_004599431.1	ABC transporter substrate binding protein	84.7	20.1	72.1
MGA_1390	LOCUS_13740	sequence18:38993..39367(+)	frameshift,internal_stop_codon	38887..38889(+)	38985,38769	WP_004599431.1	ABC transporter substrate binding protein	97.6	39.9	87.6
MGA_1391	LOCUS_13750	sequence18:39371..39760(+)	frameshift,internal_stop_codon	39824..39826(+)	39754,39931,39892	WP_004597515.1	ABC transporter permease	99.2	45.7	83.6
MGA_1392	LOCUS_13760	sequence18:39905..40198(+)	frameshift,internal_stop_codon	39824..39826(+)	39754,39931,39892	WP_004597515.1	ABC transporter permease	99.0	34.6	75.3
MGA_1393	LOCUS_13770	sequence18:40463..40744(+)	internal_stop_codon	40742..40744(+)		WP_004597517.1	ABC transporter ATP-binding protein	100.0	46.2	64.0
MGA_1394	LOCUS_13780	sequence18:40760..41098(+)	frameshift,internal_stop_codon	40742..40744(+)	41065	WP_004597517.1	ABC transporter ATP-binding protein	92.0	41.7	85.4
MGA_1395	LOCUS_13790	sequence18:41111..42775(-)	partial			WP_011016207.1	ankyrin repeat domain-containing protein	25.6	44.5	33.6
MGA_1399	LOCUS_13830	sequence18:50165..50452(+)	partial			WP_004599437.1	T4SS guanine nucleotide exchange effector RalF	44.2	9.2	61.9
MGA_1406	LOCUS_13900	sequence18:57324..58370(-)	partial			WP_004597535.1	nucleotide exchange transporter Tlc2	100.0	68.6	93.1
MGA_1430	LOCUS_14140	sequence18:78511..78774(-)	partial			WP_103897643.1	DUF1674 domain-containing protein	51.7	48.4	62.2
MGA_1437	LOCUS_14210	sequence18:85017..85238(+)	frameshift		85208,85284	WP_010886284.1	hypothetical protein	90.4	26.7	68.2
MGA_1441	LOCUS_14250	sequence18:90371..91099(+)	frameshift		90402,91093	WP_004598912.1	ankyrin repeat domain-containing protein	98.8	35.3	44.4
MGA_1449	LOCUS_14330	sequence18:96314..96634(-)	partial			WP_011057432.1	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	63.2	37.7	42.0
MGA_1464	LOCUS_14420	sequence26:1620..1898(+)	frameshift,internal_stop_codon	1879..1881(+),1566..1568(+)	1859	WP_013087223.1	conjugal transfer pilus assembly protein TraH	87.0	17.6	43.8
MGA_1470	LOCUS_14480	sequence26:5521..6279(+)	partial			WP_010875712.1	tetratricopeptide repeat protein	72.6	46.2	29.0
MGA_1472	LOCUS_14500	sequence26:6975..8162(+)	frameshift		7866,8124,7823	WP_000009324.1	type IV conjugative transfer system coupling protein TraD	63.5	36.7	26.6
MGA_1473	LOCUS_14510	sequence26:8197..8532(+)	frameshift		8123	WP_000009324.1	type IV conjugative transfer system coupling protein TraD	100.0	15.5	39.6
MGA_1475	LOCUS_14530	sequence26:9773..12067(-)	partial			WP_010947790.1	conjugative transfer relaxase/helicase TraI	69.4	27.9	26.1
MGA_1477	LOCUS_14550	sequence26:12195..12761(-)	partial			WP_004598988.1	patatin-like phospholipase family protein	73.4	28.7	33.3
MGA_1481	LOCUS_14590	sequence26:14779..15279(-)	partial			WP_048065248.1	tetratricopeptide repeat protein	57.8	24.4	33.3
MGA_1482	LOCUS_14600	sequence26:15349..15714(-)	frameshift		15718	WP_011405406.1	tetratricopeptide repeat protein	74.4	15.9	33.3
MGA_1483	LOCUS_14610	sequence26:15689..16135(-)	frameshift,internal_stop_codon	15721..15723(-)	15712,15730,15715,15718,15721,15709	WP_011021623.1	tetratricopeptide repeat protein	56.1	4.4	36.1
MGA_1488	LOCUS_14660	sequence26:18509..18973(-)	partial			WP_011837306.1	DNA adenine methylase	59.7	32.2	50.0
MGA_1495	LOCUS_14730	sequence26:26362..27081(+)	frameshift		27024	WP_226986810.1	tetratricopeptide repeat protein	49.4	36.8	32.8
MGA_1496	LOCUS_14740	sequence26:27135..28559(+)	frameshift		28553,28650	WP_005793926.1	endopeptidase La	62.0	35.6	45.2
MGA_1497	LOCUS_14750	sequence26:28737..29234(+)	frameshift		28650,28547	WP_011389427.1	endopeptidase La	64.8	13.3	63.6
MGA_1507	LOCUS_14850	sequence26:34392..35513(+)	partial			WP_011331475.1	TraB/VirB10 family protein	61.7	58.0	28.9
MGA_1509	LOCUS_14870	sequence26:35777..37300(+)	frameshift		37273	WP_011331477.1	TraC family protein	89.7	52.5	24.7
MGA_1510	LOCUS_14880	sequence26:37305..38558(+)	frameshift		37282,37358	WP_013087206.1	type IV secretion system protein TraC	63.1	32.6	24.7
MGA_1519	LOCUS_14970	sequence26:44239..45042(+)	partial			WP_000821859.1	type-F conjugative transfer system mating-pair stabilization protein TraN	91.0	37.3	33.9
MGA_1521	LOCUS_14990	sequence26:45886..47157(+)	partial			WP_011331488.1	conjugal transfer protein TraH	74.7	67.1	23.5
MGA_1526	LOCUS_15040	sequence26:51074..51499(+)	partial			WP_041669501.1	transglycosylase SLT domain-containing protein	78.7	43.0	38.3
MGA_1529	LOCUS_15070	sequence26:52630..54180(+)	frameshift		54174	WP_000009324.1	type IV conjugative transfer system coupling protein TraD	99.2	68.6	27.9
MGA_1533	LOCUS_15110	sequence26:56354..56713(+)	partial			WP_003085889.1	lysozyme inhibitor	47.9	45.7	51.7
MGA_1537	LOCUS_15150	sequence26:58907..59968(-)	partial			WP_010942261.1	DNA polymerase IV	83.6	72.4	37.3
MGA_1538	LOCUS_15160	sequence26:60028..67527(-)	partial			WP_106726897.1	Ti-type conjugative transfer relaxase TraA	10.8	26.6	29.0
MGA_1555	LOCUS_15320	sequence27:2020..2454(+)	frameshift		2424	WP_147141400.1	autotransporter domain-containing protein	81.9	6.9	31.4
MGA_1557	LOCUS_15340	sequence27:3040..3447(-)	frameshift		3485	WP_040534536.1	IS5 family transposase	85.2	43.4	36.2
MGA_1561	LOCUS_15380	sequence27:5722..6456(-)	partial			WP_010942261.1	DNA polymerase IV	93.9	55.0	41.5
MGA_1566	LOCUS_15430	sequence27:8576..9649(+)	frameshift		9637	WP_010933069.1	ATP-dependent RecD-like DNA helicase	97.2	47.3	44.7
MGA_1567	LOCUS_15440	sequence27:9643..10572(+)	frameshift		9637	WP_010933069.1	ATP-dependent RecD-like DNA helicase	99.0	49.7	43.8
MGA_1569	LOCUS_15460	sequence27:11368..11832(+)	partial			WP_003017534.1	Hsp20/alpha crystallin family protein	74.0	76.1	40.5
