{
    "type": "genome",
    "identifier": "GCF_000756615.1",
    "organism": "Paenibacillus durus",
    "title": "Paenibacillus durus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Cornell University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000756615.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN03010338",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "44251",
        "species_taxid": "44251",
        "organism_name": "Paenibacillus durus",
        "infraspecific_name": "strain=DSM 1735",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/09/22",
        "asm_name": "ASM75661v1",
        "asm_submitter": "Cornell University",
        "gbrs_paired_asm": "GCA_000756615.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/756/615/GCF_000756615.1_ASM75661v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6053498",
        "genome_size_ungapped": "6053498",
        "gc_percent": "51.000000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000756615.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "5487",
        "protein_coding_gene_count": "5301",
        "non_coding_gene_count": "114",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-09-22",
    "dateModified": "2014-09-22",
    "datePublished": "2014-09-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Paenibacillus durus"
        ],
        "sample_taxid": [
            "44251"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "1.712 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6053498",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "6038347",
        "N50 (bp)": "6038347",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.8",
        "Number of CDSs": "5450",
        "Average Protein Length": "318.3",
        "Coding Ratio (%)": "86.0",
        "Number of rRNAs": "27",
        "Number of tRNAs": "83",
        "Number of CRISPRs": "6"
    },
    "has_analysis": true,
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                "relation_to_type": "type",
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            {
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            {
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            {
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                "species_taxid": 365616,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus rhizophilus",
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                "species_taxid": 1850366,
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                "total_fragments": 2017,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus apii",
                "strain": "strain=7124",
                "accession": "GCA_011043685.1",
                "taxid": 1850370,
                "species_taxid": 1850370,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.2865,
                "matched_fragments": 1293,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus sonchi",
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                "accession": "GCA_016772475.1",
                "taxid": 373687,
                "species_taxid": 373687,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8353,
                "matched_fragments": 501,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus tianjinensis",
                "strain": "strain=TB2019",
                "accession": "GCA_017086365.1",
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                "species_taxid": 2810347,
                "relation_to_type": "type",
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                "ani": 78.7578,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus piscarius",
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                "accession": "GCA_022234545.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0806,
                "matched_fragments": 449,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus agri",
                "strain": "strain=JW14",
                "accession": "GCA_013359945.1",
                "taxid": 2744309,
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                "relation_to_type": "type",
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                "ani": 78.0794,
                "matched_fragments": 401,
                "total_fragments": 2017,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCF_000756615.1",
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                "total_fragments": 2017,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000993825.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus",
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            },
            {
                "accession": "GCF_018966525.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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            {
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        ]
    },
    "_bac2feature": {
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        "bacillus_cell_shape": 1.0,
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    "_genome_taxon": [
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        "durus"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}