{ "type": "genome", "identifier": "GCF_000763575.1", "organism": "Thermoanaerobacter kivui", "title": "Thermoanaerobacter kivui", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000763575.1", "bioproject": "PRJNA224116", "biosample": "SAMN02947172", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2325", "species_taxid": "2325", "organism_name": "Thermoanaerobacter kivui", "infraspecific_name": "strain=LKT-1", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/10/06", "asm_name": "ASM76357v1", "asm_submitter": "Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory", "gbrs_paired_asm": "GCA_000763575.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/763/575/GCF_000763575.1_ASM76357v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2397824", "genome_size_ungapped": "2397824", "gc_percent": "35.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000763575.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "2533", "protein_coding_gene_count": "2266", "non_coding_gene_count": "76", "pubmed_id": "25523312" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-10-06", "dateModified": "2014-10-06", "datePublished": "2014-10-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Thermoanaerobacter kivui" ], "sample_taxid": [ "2325" ], 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"-" }, { "accession": "GCF_000019085.1", "gtdb_species": "s__Thermoanaerobacter pseudethanolicus", "ani": 88.5015, "matched_fragments": 513, "total_fragments": 799, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Thermoanaerobacteria;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter", "ani_circumscription_radius": 95.1128, "mean_intra_species_ani": "98.35", "min_intra_species_ani": "97.55", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.81", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCA_014896455.1", "gtdb_species": "s__Thermoanaerobacter sp014896455", "ani": 87.901, "matched_fragments": 507, "total_fragments": 799, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Thermoanaerobacteria;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter", "ani_circumscription_radius": 95.6271, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.155, "cell_length": 0.301, "doubling_h": 0.365, "growth_tmp": 62.0, "optimum_tmp": 60.0, "optimum_ph": 7.192, "genome_size": 2397823.0, "gc_content": 35.0, "coding_genes": 2249.667, "rRNA16S_genes": 4.0, "tRNA_genes": 58.0, "gram_stain": 1.0, "sporulation": 1.0, "motility": 1.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 0.0, "thermophilic_range_tmp": 1.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Thermoanaerobacter", "kivui" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }