# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_45	LOCUS_00420	sequence1:48195..48620(+)	partial			WP_005478979.1	tRNA-uridine aminocarboxypropyltransferase	99.3	68.6	48.6
MGA_58	LOCUS_00550	sequence1:63570..64046(+)	frameshift		64034	WP_011072286.1	IS630-like element ISSod10 family transposase	96.2	44.6	47.4
MGA_59	LOCUS_00560	sequence1:64177..64605(+)	frameshift		64034	WP_011072286.1	IS630-like element ISSod10 family transposase	100.0	41.6	60.6
MGA_61	LOCUS_00580	sequence1:65765..66241(+)	frameshift,internal_stop_codon	65646..65648(+)	66229	WP_011072286.1	IS630-like element ISSod10 family transposase	96.2	44.6	47.4
MGA_62	LOCUS_00590	sequence1:66372..66800(+)	frameshift,internal_stop_codon	66926..66928(+)	66852,66229	WP_011072286.1	IS630-like element ISSod10 family transposase	100.0	41.6	60.6
MGA_96	LOCUS_00910	sequence1:104887..105315(-)	frameshift		105457	WP_011072286.1	IS630-like element ISSod10 family transposase	100.0	41.6	60.6
MGA_97	LOCUS_00920	sequence1:105446..105922(-)	frameshift		105192,105457,105228,105303	WP_011072286.1	IS630-like element ISSod10 family transposase	96.2	44.6	47.4
MGA_98	LOCUS_00930	sequence1:106176..106520(+)	frameshift		106064,106139,106175	WP_011072286.1	IS630-like element ISSod10 family transposase	99.1	34.6	55.9
MGA_182	LOCUS_01750	sequence1:198784..199212(-)	frameshift,internal_stop_codon	198765..198767(-)	199259	WP_011072286.1	IS630-like element ISSod10 family transposase	100.0	41.6	60.6
MGA_196	LOCUS_01890	sequence1:218364..221102(-)	partial			WP_011262858.1	lipoprotein	70.3	71.8	44.4
MGA_203	LOCUS_01960	sequence1:227615..229186(-)	partial			WP_000473082.1	S8 family peptidase	41.7	35.9	34.9
MGA_207	LOCUS_02000	sequence1:231696..232037(+)	partial			WP_012546385.1	response regulator	75.2	68.9	35.3
MGA_223	LOCUS_02160	sequence1:250665..251174(+)	partial			WP_005478648.1	hypothetical protein	49.1	40.5	51.8
MGA_282	LOCUS_02750	sequence1:315436..317208(+)	frameshift		317136,317124,317130,317133,317118	WP_210190849.1	FG-GAP-like repeat-containing protein	37.8	6.0	29.3
MGA_283	LOCUS_02760	sequence1:317235..321950(+)	partial			WP_000014822.1	RHS element core protein	26.5	31.6	24.6
MGA_291	LOCUS_02840	sequence1:326644..327459(-)	frameshift		327713	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_292	LOCUS_02850	sequence1:327678..328178(-)	frameshift		327713	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_317	LOCUS_03100	sequence1:356955..358058(-)	partial			WP_005477449.1	siderophore biosynthesis protein PvsD	99.5	59.9	93.7
MGA_322	LOCUS_03150	sequence1:362362..362595(+)	partial			WP_011071025.1	IS256-like element ISSod18 family transposase	75.3	14.4	69.0
MGA_324	LOCUS_03170	sequence1:364955..367192(+)	partial			WP_010967890.1	arylsulfatase	63.1	70.5	24.4
MGA_325	LOCUS_03180	sequence1:367858..368163(+)	partial			WP_011389728.1	helix-turn-helix transcriptional regulator	79.2	65.6	35.4
MGA_327	LOCUS_03200	sequence1:369739..370980(+)	partial			WP_010946812.1	DUF927 domain-containing protein	74.6	55.2	39.5
MGA_330	LOCUS_03230	sequence1:373955..375274(+)	partial			WP_010876574.1	restriction endonuclease subunit S	43.5	46.9	40.9
MGA_336	LOCUS_03290	sequence1:385190..385864(-)	partial			WP_009936882.1	site-specific integrase	84.8	43.1	34.2
MGA_375	LOCUS_03680	sequence1:430025..432598(+)	partial			WP_011071157.1	S8 family serine peptidase	31.0	34.5	29.0
MGA_411	LOCUS_04040	sequence1:470754..472862(+)	partial			WP_011142953.1	plasmid pRiA4b ORF-3 family protein	22.2	78.9	39.9
MGA_449	LOCUS_04420	sequence1:518676..518870(-)	partial			WP_005480479.1	DUF3624 domain-containing protein	92.2	65.6	78.0
MGA_483	LOCUS_04740	sequence1:555175..555531(-)	internal_stop_codon	555592..555594(-)		WP_011072286.1	IS630-like element ISSod10 family transposase	100.0	34.6	58.5
MGA_523	LOCUS_05140	sequence1:599773..600390(-)	frameshift,internal_stop_codon	600572..600574(-)	600412	WP_021706804.1	IS5-like element ISVpa3 family transposase	99.5	66.7	79.4
MGA_532	LOCUS_05230	sequence1:608849..609682(-)	frameshift		609810	WP_014207378.1	sulfate ABC transporter ATP-binding protein	99.3	79.0	53.9
MGA_537	LOCUS_05280	sequence1:613611..614600(+)	partial			WP_011072957.1	sigma-54 dependent transcriptional regulator	96.7	62.6	50.8
MGA_540	LOCUS_05310	sequence1:615575..616450(+)	partial			WP_011461096.1	IS66 family transposase	88.0	49.2	34.0
MGA_547	LOCUS_05380	sequence1:623674..623814(-)	partial			WP_021706804.1	IS5-like element ISVpa3 family transposase	100.0	15.0	89.1
MGA_552	LOCUS_05430	sequence1:629602..630156(-)	frameshift,internal_stop_codon	630165..630167(-)	630299	WP_001123234.1	TRAP transporter substrate-binding protein	98.9	50.7	85.2
MGA_553	LOCUS_05440	sequence1:630166..630306(-)	frameshift,internal_stop_codon	630165..630167(-)	630299	WP_001918468.1	TRAP transporter substrate-binding protein	95.7	12.1	86.4
MGA_554	LOCUS_05450	sequence1:630276..630683(-)	frameshift,internal_stop_codon	630165..630167(-)	630299	WP_001918468.1	TRAP transporter substrate-binding protein	88.1	33.5	76.2
MGA_575	LOCUS_05660	sequence1:653869..654081(-)	frameshift		654249,654078	WP_005455438.1	potassium channel family protein	98.6	25.4	60.9
MGA_576	LOCUS_05670	sequence1:654232..654570(-)	frameshift		654249,654078	WP_005455438.1	potassium channel family protein	98.2	40.4	81.8
MGA_658	LOCUS_06490	sequence1:757504..758415(+)	frameshift		757391	WP_010895430.1	peptide chain release factor 2	100.0	83.0	94.4
MGA_750	LOCUS_07400	sequence1:865350..866372(+)	partial			WP_011974776.1	EAL domain-containing protein	93.5	41.6	31.7
MGA_758	LOCUS_07480	sequence1:877315..877965(+)	internal_stop_codon	877963..877965(+)		WP_005483027.1	LysR substrate-binding domain-containing protein	97.7	70.6	58.1
MGA_759	LOCUS_07490	sequence1:877966..878226(+)	internal_stop_codon	877963..877965(+)		WP_005483027.1	LysR substrate-binding domain-containing protein	93.0	26.1	71.2
MGA_760	LOCUS_07500	sequence1:878544..879290(+)	frameshift		878535	WP_011706755.1	ion channel	99.6	76.9	47.4
MGA_905	LOCUS_08950	sequence1:1036945..1037379(+)	partial			WP_001880792.1	hypothetical protein	92.4	49.1	42.1
MGA_910	LOCUS_09000	sequence1:1041606..1042043(+)	partial			WP_001880792.1	hypothetical protein	94.5	51.3	33.8
MGA_931	LOCUS_09210	sequence1:1060673..1061944(-)	frameshift		1061984,1062155,1061980	WP_005478508.1	cation:proton antiporter	100.0	80.0	81.3
MGA_980	LOCUS_09700	sequence1:1113040..1113249(+)	frameshift		1113243	WP_000735487.1	lytic murein transglycosylase	98.6	21.1	63.2
MGA_981	LOCUS_09710	sequence1:1113276..1114010(+)	frameshift		1113243	WP_005479026.1	lytic murein transglycosylase	99.2	74.9	78.9
MGA_1014	LOCUS_10040	sequence1:1148775..1149527(+)	partial			WP_005479029.1	TRAP transporter large permease	97.6	53.9	91.4
MGA_1015	LOCUS_10050	sequence1:1149447..1150667(-)	frameshift		1150779	WP_005482580.1	ATP-binding protein	94.8	64.2	73.0
MGA_1048	LOCUS_10380	sequence1:1187156..1188757(+)	frameshift		1188751	WP_005481822.1	GGDEF domain-containing protein	94.2	75.3	57.8
MGA_1049	LOCUS_10390	sequence1:1188754..1189128(+)	frameshift		1188751	WP_005481822.1	GGDEF domain-containing protein	96.0	17.8	51.3
MGA_1058	LOCUS_10480	sequence1:1198099..1199280(+)	partial			WP_162146334.1	restriction endonuclease subunit S	72.8	75.2	26.9
MGA_1062	LOCUS_10520	sequence1:1207538..1207885(+)	partial			WP_005478335.1	TniQ family protein	88.7	25.8	35.9
MGA_1075	LOCUS_10650	sequence1:1220395..1220661(+)	partial			WP_011963359.1	helix-turn-helix domain-containing protein	52.3	37.8	56.5
MGA_1077	LOCUS_10670	sequence1:1223103..1224200(+)	partial			WP_002287699.1	SIR2 family protein	95.3	74.5	45.8
MGA_1080	LOCUS_10700	sequence1:1226749..1227147(+)	partial			WP_002287699.1	SIR2 family protein	97.7	27.6	36.0
MGA_1092	LOCUS_10800	sequence1:1240036..1241901(+)	partial			WP_011070585.1	tandem-95 repeat protein	96.8	24.2	44.4
MGA_1117	LOCUS_11050	sequence1:1269149..1269955(+)	partial			WP_005481856.1	DNA internalization-related competence protein ComEC/Rec2	95.1	33.9	58.0
MGA_1211	LOCUS_11990	sequence1:1380674..1381558(+)	partial			WP_002864285.1	N-6 DNA methylase	65.6	14.9	34.2
MGA_1212	LOCUS_12000	sequence1:1381595..1382650(+)	partial			WP_014205996.1	restriction endonuclease subunit S	46.4	40.1	42.0
MGA_1213	LOCUS_12010	sequence1:1382693..1384537(+)	partial			WP_011123252.1	restriction system-associated AAA family ATPase	24.1	23.8	30.7
MGA_1214	LOCUS_12020	sequence1:1384540..1385367(+)	partial			WP_007478814.1	AAA family ATPase	57.5	20.3	30.2
MGA_1225	LOCUS_12130	sequence1:1397708..1397950(+)	partial			WP_010905540.1	HAD family phosphatase	65.0	23.4	46.2
MGA_1226	LOCUS_12140	sequence1:1398010..1399065(-)	partial			WP_011070845.1	methyl-accepting chemotaxis protein	97.7	63.0	28.3
MGA_1229	LOCUS_12170	sequence1:1401490..1402548(+)	partial			WP_014626585.1	GGDEF domain-containing protein	69.0	72.1	35.1
MGA_1232	LOCUS_12200	sequence1:1404210..1405190(-)	partial			WP_010937586.1	AraC family transcriptional regulator	26.4	26.4	43.0
MGA_1233	LOCUS_12210	sequence1:1405232..1406242(-)	partial			WP_005113345.1	CocE/NonD family hydrolase	73.5	73.4	36.7
MGA_1234	LOCUS_12220	sequence1:1406262..1407674(-)	partial			WP_011071225.1	efflux RND transporter permease subunit	83.0	36.8	33.0
MGA_1307	LOCUS_12940	sequence1:1492811..1494031(+)	frameshift		1493974	WP_005458040.1	PLP-dependent aminotransferase family protein	96.1	84.2	67.2
MGA_1308	LOCUS_12950	sequence1:1493983..1494216(+)	frameshift		1493974	WP_005458040.1	PLP-dependent aminotransferase family protein	90.9	15.1	40.0
MGA_1331	LOCUS_13180	sequence1:1519596..1520849(-)	partial			WP_172626041.1	GGDEF domain-containing protein	40.8	41.9	40.0
MGA_1354	LOCUS_13410	sequence1:1550343..1550525(-)	partial			WP_149560715.1	AraC family transcriptional regulator	85.0	14.7	76.5
MGA_1361	LOCUS_13480	sequence1:1558535..1558762(-)	frameshift		1558805	WP_005454986.1	alkaline phosphatase D family protein	100.0	11.6	69.3
MGA_1376	LOCUS_13630	sequence1:1576248..1576850(+)	partial			WP_011071953.1	GNAT family N-acetyltransferase	48.5	55.1	31.6
MGA_1387	LOCUS_13740	sequence1:1593783..1594649(+)	partial			WP_011707555.1	cyclic diguanylate phosphodiesterase	92.7	51.0	49.4
MGA_1389	LOCUS_13760	sequence1:1595061..1596830(+)	partial			WP_000115816.1	EAL domain-containing protein	95.9	68.9	34.1
MGA_1462	LOCUS_14490	sequence1:1674999..1688324(+)	partial			WP_005477759.1	tandem-95 repeat protein	50.6	71.2	32.9
MGA_1475	LOCUS_14620	sequence1:1700468..1701265(+)	partial			WP_011261855.1	phosphoenolpyruvate synthase	77.7	70.4	44.0
MGA_1501	LOCUS_14880	sequence1:1738017..1738238(+)	frameshift		1738015	WP_005457460.1	hypothetical protein	97.3	66.4	53.5
MGA_1505	LOCUS_14920	sequence1:1742933..1743289(-)	partial			WP_005457383.1	hypothetical protein	67.8	67.8	55.0
MGA_1529	LOCUS_15160	sequence1:1766340..1767752(+)	partial			WP_005479452.1	bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA	50.0	41.4	66.5
MGA_1552	LOCUS_15390	sequence1:1790001..1790882(-)	internal_stop_codon	1790949..1790951(-)		WP_005481453.1	L-serine ammonia-lyase	99.7	64.0	89.7
MGA_1553	LOCUS_15400	sequence1:1790949..1791371(-)	internal_stop_codon	1790949..1790951(-)		WP_011263784.1	L-serine ammonia-lyase	100.0	30.7	72.9
MGA_1554	LOCUS_15410	sequence1:1791384..1792028(-)	partial			WP_001882525.1	sodium:solute symporter	100.0	41.7	71.0
MGA_1556	LOCUS_15430	sequence1:1792565..1792963(+)	frameshift		1792412	WP_121450865.1	IS3 family transposase	72.7	25.7	57.3
MGA_1567	LOCUS_15540	sequence1:1802256..1802495(-)	partial			WP_000843587.1	type II toxin-antitoxin system RelE/ParE family toxin	100.0	71.8	92.4
MGA_1573	LOCUS_15600	sequence1:1806987..1807802(-)	frameshift		1808056	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_1574	LOCUS_15610	sequence1:1808021..1808521(-)	frameshift		1808056	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_1586	LOCUS_15730	sequence1:1823430..1825181(+)	internal_stop_codon	1825179..1825181(+)		WP_005480178.1	HTH-type transcriptional regulator MalT	100.0	64.6	87.3
MGA_1587	LOCUS_15740	sequence1:1825278..1826138(+)	internal_stop_codon	1825179..1825181(+)		WP_005480178.1	HTH-type transcriptional regulator MalT	100.0	31.7	88.1
MGA_1588	LOCUS_15750	sequence1:1826311..1828281(-)	partial			WP_010922388.1	alpha-amylase AmyA	81.7	70.7	35.0
MGA_1591	LOCUS_15780	sequence1:1830144..1831154(-)	partial			WP_010942906.1	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	66.7	61.1	44.6
MGA_1601	LOCUS_15880	sequence1:1841025..1844618(-)	partial			WP_206819303.1	pullulanase-type alpha-1,6-glucosidase	85.0	74.6	51.6
MGA_1646	LOCUS_16330	sequence1:1898396..1898689(+)	partial			WP_005464900.1	DUF3081 domain-containing protein	68.0	79.5	78.8
MGA_1664	LOCUS_16510	sequence1:1916031..1916231(-)	partial			WP_000159137.1	pirin family protein	93.9	22.0	67.7
MGA_1670	LOCUS_16570	sequence1:1922975..1923811(+)	partial			WP_011249477.1	alpha/beta hydrolase-fold protein	92.1	52.3	44.1
MGA_1671	LOCUS_16580	sequence1:1923899..1926661(-)	partial			WP_048064995.1	amylo-alpha-1,6-glucosidase	39.9	55.1	33.4
MGA_1692	LOCUS_16790	sequence1:1949071..1950495(+)	partial			WP_011090330.1	thiamine pyrophosphate-binding protein	47.0	40.3	37.7
MGA_1697	LOCUS_16840	sequence1:1952776..1953033(+)	internal_stop_codon	1953031..1953033(+)		WP_010966572.1	iron-containing alcohol dehydrogenase	100.0	21.9	45.9
MGA_1698	LOCUS_16850	sequence1:1953124..1953975(+)	internal_stop_codon	1953031..1953033(+)		WP_003228869.1	iron-containing alcohol dehydrogenase	90.1	65.9	32.9
MGA_1713	LOCUS_17000	sequence1:1965448..1967925(-)	partial			WP_011070706.1	EAL domain-containing protein	76.6	42.2	33.6
MGA_1715	LOCUS_17020	sequence1:1969083..1972541(+)	partial			WP_011071149.1	PAS domain S-box protein	67.2	43.3	28.7
MGA_1720	LOCUS_17070	sequence1:1976638..1977165(-)	frameshift		1977176	WP_005464957.1	LysR substrate-binding domain-containing protein	97.1	57.6	61.8
MGA_1721	LOCUS_17080	sequence1:1977141..1977539(-)	frameshift		1977176	WP_005464957.1	LysR substrate-binding domain-containing protein	92.4	41.4	60.7
MGA_1732	LOCUS_17190	sequence1:1988800..1989660(+)	partial			WP_010947962.1	DNA-binding domain-containing protein	45.8	50.4	30.1
MGA_1750	LOCUS_17370	sequence1:2011117..2011491(-)	partial			WP_001249605.1	rhodanese-like domain-containing protein	74.2	78.0	68.5
MGA_1753	LOCUS_17400	sequence1:2013380..2015395(+)	partial			WP_003084250.1	EAL domain-containing protein	62.7	55.0	40.5
MGA_1780	LOCUS_17670	sequence1:2045835..2046218(-)	frameshift		2046198	WP_011072319.1	chemotaxis response regulator protein-glutamate methylesterase	92.1	32.9	76.1
MGA_1781	LOCUS_17680	sequence1:2046157..2046735(-)	frameshift		2046198	WP_011704959.1	chemotaxis response regulator protein-glutamate methylesterase	83.9	42.2	57.1
MGA_1804	LOCUS_17910	sequence1:2073889..2074689(-)	frameshift		2074754	WP_085973330.1	IS3-like element ISBj3 family transposase	97.4	68.5	54.8
MGA_1811	LOCUS_17980	sequence1:2081321..2082361(+)	frameshift		2082355	WP_000561483.1	group II intron reverse transcriptase/maturase	97.4	75.9	43.6
MGA_1820	LOCUS_18070	sequence1:2087413..2088114(-)	partial			WP_002720078.1	GlxA family transcriptional regulator	36.1	24.6	36.9
MGA_1822	LOCUS_18090	sequence1:2089023..2090591(+)	partial			WP_033929385.1	methyl-accepting chemotaxis protein	73.9	60.3	39.8
MGA_1827	LOCUS_18140	sequence1:2093509..2094231(+)	frameshift		2094045	WP_005463958.1	chaperonin GroEL	76.2	34.4	97.8
MGA_1828	LOCUS_18150	sequence1:2094153..2095082(+)	frameshift		2094048	WP_005463958.1	chaperonin GroEL	98.4	57.1	88.8
MGA_1832	LOCUS_18190	sequence1:2097420..2097989(+)	partial			WP_005464862.1	PTS N-acetylmuramic acid transporter subunit IIBC	63.0	24.6	85.7
MGA_1833	LOCUS_18200	sequence1:2098120..2098719(+)	partial			WP_005479219.1	M9 family metallopeptidase	93.0	23.0	69.1
MGA_1835	LOCUS_18220	sequence1:2099460..2099837(+)	partial			WP_011073594.1	SirB2 family protein	76.0	72.5	40.0
MGA_1837	LOCUS_18240	sequence1:2100248..2101063(-)	frameshift		2101317	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_1838	LOCUS_18250	sequence1:2101282..2101782(-)	frameshift		2101317	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_1841	LOCUS_18280	sequence1:2103041..2103472(+)	partial			WP_005489362.1	Crp/Fnr family transcriptional regulator	28.0	17.7	67.5
MGA_1858	LOCUS_18450	sequence1:2122289..2122810(+)	internal_stop_codon	2122145..2122147(+)		WP_001198755.1	transporter substrate-binding domain-containing protein	99.4	66.7	57.0
MGA_1868	LOCUS_18550	sequence1:2133989..2135875(+)	partial			WP_012047985.1	pyridoxal-dependent decarboxylase	68.2	74.6	24.2
MGA_1875	LOCUS_18620	sequence1:2141437..2141880(+)	partial			WP_011073525.1	TetR family transcriptional regulator	63.9	59.1	37.2
MGA_1901	LOCUS_18870	sequence1:2170666..2172537(+)	partial			WP_005477185.1	ATP-binding protein	99.5	71.4	38.8
MGA_1902	LOCUS_18880	sequence1:2172578..2172715(+)	partial			WP_005477185.1	ATP-binding protein	91.1	4.7	87.8
MGA_1942	LOCUS_19280	sequence1:2213405..2215558(-)	partial			WP_209627475.1	ATP-binding protein	63.7	61.6	25.1
MGA_1947	LOCUS_19330	sequence1:2219137..2220324(+)	partial			WP_011707759.1	methyl-accepting chemotaxis protein	86.8	59.4	48.4
MGA_1951	LOCUS_19370	sequence1:2222992..2224275(-)	partial			WP_010940327.1	PAS domain S-box protein	41.7	22.0	39.6
MGA_1957	LOCUS_19430	sequence1:2229864..2230514(-)	frameshift		2230473	WP_005464201.1	hypothetical protein	89.4	68.9	77.9
MGA_1958	LOCUS_19440	sequence1:2230426..2230749(-)	frameshift		2230473	WP_005464201.1	hypothetical protein	83.2	31.4	68.5
MGA_1963	LOCUS_19490	sequence1:2234984..2237473(-)	partial			WP_002681765.1	leucine-rich repeat domain-containing protein	52.7	68.8	26.1
MGA_1971	LOCUS_19570	sequence1:2244211..2244993(+)	partial			WP_211309657.1	DUF6447 family protein	74.6	51.3	39.4
MGA_2022	LOCUS_20080	sequence1:2295804..2299901(-)	partial			WP_011140637.1	hybrid sensor histidine kinase/response regulator	74.2	71.0	43.3
MGA_2044	LOCUS_20300	sequence1:2326952..2327149(-)	internal_stop_codon	2326952..2326954(-)		WP_005477350.1	methyl-accepting chemotaxis protein	100.0	11.0	67.7
MGA_2054	LOCUS_20400	sequence1:2332672..2332929(+)	partial			WP_005482651.1	ribosome alternative rescue factor ArfA	72.9	63.9	69.4
MGA_2057	LOCUS_20430	sequence1:2334229..2335029(+)	frameshift		2334163	WP_085973330.1	IS3-like element ISBj3 family transposase	97.4	68.5	54.8
MGA_2058	LOCUS_20440	sequence1:2334983..2335555(-)	partial			WP_010922786.1	ISAs1-like element IS1548 family transposase	81.6	41.1	26.9
MGA_2061	LOCUS_20470	sequence1:2338147..2338728(+)	partial			WP_011073495.1	sensor domain-containing diguanylate cyclase	82.9	34.7	45.6
MGA_2062	LOCUS_20480	sequence1:2338767..2339162(+)	partial			WP_011073495.1	sensor domain-containing diguanylate cyclase	90.8	26.5	44.3
MGA_2078	LOCUS_20640	sequence1:2358940..2362020(+)	partial			WP_099797719.1	GH116 family glycosyl hydrolase	50.7	66.1	26.1
MGA_2081	LOCUS_20670	sequence1:2365985..2366677(+)	partial			WP_010973531.1	glycoside hydrolase family 16 protein	52.2	51.0	34.8
MGA_2084	LOCUS_20700	sequence1:2369522..2371369(+)	partial			WP_001162066.1	methyl-accepting chemotaxis protein	67.0	62.1	29.6
MGA_2096	LOCUS_20820	sequence1:2382178..2382978(+)	frameshift		2382112	WP_085973330.1	IS3-like element ISBj3 family transposase	97.4	68.5	54.8
MGA_2112	LOCUS_20980	sequence1:2397806..2398060(-)	partial			WP_013097251.1	methylglyoxal synthase	89.3	49.3	66.7
MGA_2119	LOCUS_21050	sequence1:2407357..2407719(+)	internal_stop_codon	2407717..2407719(+)		WP_001882860.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	99.2	19.7	46.2
MGA_2120	LOCUS_21060	sequence1:2407723..2409174(+)	internal_stop_codon	2407717..2407719(+)		WP_001882860.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	100.0	79.8	53.4
MGA_2126	LOCUS_21120	sequence1:2416658..2416906(+)	frameshift		2416891	WP_162796741.1	methyl-accepting chemotaxis protein	85.4	11.0	58.6
MGA_2127	LOCUS_21130	sequence1:2416876..2417442(+)	frameshift		2416891,2417356	WP_162796741.1	methyl-accepting chemotaxis protein	92.0	27.2	63.6
MGA_2128	LOCUS_21140	sequence1:2417439..2418584(+)	frameshift		2417355	WP_162796741.1	methyl-accepting chemotaxis protein	100.0	59.9	69.3
MGA_2163	LOCUS_21490	sequence1:2455201..2456280(+)	partial			WP_150912620.1	diguanylate cyclase	71.0	47.0	28.9
MGA_2175	LOCUS_21610	sequence1:2471207..2471419(-)	partial			WP_005480281.1	DUF2986 domain-containing protein	55.7	65.0	84.6
MGA_2200	LOCUS_21860	sequence1:2496868..2497530(+)	partial			WP_005479359.1	diguanylate cyclase	98.2	67.7	72.7
MGA_2204	LOCUS_21900	sequence1:2500020..2500220(+)	partial			WP_014206666.1	GGDEF domain-containing protein	84.8	13.9	51.8
MGA_2217	LOCUS_22030	sequence1:2512124..2512780(+)	partial			WP_011263422.1	tyrosine-type recombinase/integrase	95.0	68.8	37.3
MGA_2276	LOCUS_22620	sequence1:2582027..2583007(-)	partial			WP_000019836.1	nitrate transporter NarK	97.2	70.4	53.7
MGA_2282	LOCUS_22680	sequence1:2587644..2588219(+)	partial			WP_064242132.1	HPP family protein	90.6	46.4	25.4
MGA_2283	LOCUS_22690	sequence1:2588293..2589459(-)	partial			WP_011262321.1	methyl-accepting chemotaxis protein	92.3	49.8	25.8
MGA_2305	LOCUS_22910	sequence1:2619268..2620368(-)	partial			WP_001233647.1	GlyGly-anchored extracellular serine protease VesA	74.9	80.9	45.3
MGA_2316	LOCUS_23020	sequence1:2635322..2636146(+)	partial			WP_010989999.1	polysaccharide monooxygenase	39.4	21.3	38.9
MGA_2318	LOCUS_23040	sequence1:2637318..2637539(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	93.2	18.2	66.2
MGA_2319	LOCUS_23050	sequence1:2637560..2637862(+)	partial			WP_000340252.1	galactose/methyl galactoside ABC transporter permease MglC	92.0	27.5	79.3
MGA_2320	LOCUS_23060	sequence1:2637986..2639920(-)	internal_stop_codon	2640074..2640076(-)		WP_005480361.1	SMC family ATPase	99.8	63.2	46.2
MGA_2321	LOCUS_23070	sequence1:2640074..2641033(-)	internal_stop_codon	2640074..2640076(-)		WP_005480361.1	SMC family ATPase	95.9	30.1	63.4
MGA_2329	LOCUS_23150	sequence1:2652621..2653370(+)	partial			WP_005454080.1	fatty acid desaturase	100.0	66.6	63.5
MGA_2352	LOCUS_23380	sequence1:2673872..2677297(-)	partial			WP_000717964.1	lipoprotein adhesin LigB	28.0	17.4	24.5
MGA_2353	LOCUS_23390	sequence1:2677309..2678124(-)	frameshift		2678378	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2354	LOCUS_23400	sequence1:2678343..2678843(-)	frameshift		2678378	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2356	LOCUS_23420	sequence1:2679756..2680262(-)	partial			WP_003640618.1	MarR family transcriptional regulator	66.1	63.8	34.5
MGA_2366	LOCUS_23520	sequence1:2689165..2690511(-)	frameshift		2690187	WP_005479434.1	RHS repeat-associated core domain-containing protein	25.2	8.2	59.3
MGA_2368	LOCUS_23540	sequence1:2691735..2693390(-)	partial			WP_005479434.1	RHS repeat-associated core domain-containing protein	37.4	14.9	56.8
MGA_2369	LOCUS_23550	sequence1:2693560..2693757(-)	partial			WP_005453885.1	immunity 49 family protein	80.0	17.4	63.5
MGA_2398	LOCUS_23840	sequence1:2732495..2732845(-)	internal_stop_codon	2732939..2732941(-)		WP_011072192.1	ISAs1-like element ISSod22 family transposase	95.7	30.0	60.7
MGA_2399	LOCUS_23850	sequence1:2732939..2733622(-)	internal_stop_codon	2732939..2732941(-)		WP_011072192.1	ISAs1-like element ISSod22 family transposase	96.5	58.7	58.0
MGA_2401	LOCUS_23870	sequence1:2734187..2735602(+)	partial			WP_011705409.1	hemolysin Ahh1	80.3	60.7	29.9
MGA_2406	LOCUS_23920	sequence1:2741874..2743961(+)	partial			WP_005478687.1	EAL domain-containing protein	35.3	23.4	38.0
MGA_2421	LOCUS_24070	sequence1:2759244..2759459(-)	partial			WP_000964920.1	LD-carboxypeptidase	90.1	19.2	65.6
MGA_2430	LOCUS_24160	sequence1:2769171..2770682(+)	partial			WP_006313185.1	EAL domain-containing protein	53.5	58.7	37.0
MGA_2431	LOCUS_24170	sequence1:2771002..2771616(-)	frameshift		2771623	WP_001177874.1	pyruvate, water dikinase regulatory protein	99.5	73.3	81.8
MGA_2488	LOCUS_24740	sequence1:2835730..2836233(-)	internal_stop_codon	2836255..2836257(-)		WP_001891245.1	glutathione S-transferase N-terminal domain-containing protein	98.8	82.9	61.2
MGA_2545	LOCUS_25310	sequence1:2897590..2898111(-)	internal_stop_codon	2898133..2898135(-)		WP_005478375.1	MerR family transcriptional regulator	98.3	63.3	51.5
MGA_2546	LOCUS_25320	sequence1:2898133..2898399(-)	internal_stop_codon	2898133..2898135(-)		WP_005478375.1	MerR family transcriptional regulator	84.1	27.4	81.1
MGA_2575	LOCUS_25610	sequence1:2939504..2939932(+)	frameshift		2939899	WP_005477309.1	hypothetical protein	93.7	64.9	69.2
MGA_2576	LOCUS_25620	sequence1:2939890..2940153(+)	frameshift		2939899	WP_005477309.1	hypothetical protein	81.6	34.6	60.6
MGA_2584	LOCUS_25700	sequence1:2946503..2946916(+)	partial			WP_015666506.1	GFA family protein	58.4	61.4	33.3
MGA_2587	LOCUS_25730	sequence1:2951199..2952029(+)	partial			WP_010947422.1	winged helix-turn-helix domain-containing protein	16.3	44.6	53.3
MGA_2591	LOCUS_25770	sequence1:2955783..2956268(+)	partial			WP_000978021.1	transporter substrate-binding domain-containing protein	94.4	62.6	65.1
MGA_2602	LOCUS_25880	sequence1:2971378..2971968(+)	internal_stop_codon	2971966..2971968(+)		WP_000173586.1	DUF3404 domain-containing protein	100.0	40.5	95.9
MGA_2603	LOCUS_25890	sequence1:2971993..2972832(+)	internal_stop_codon	2971966..2971968(+)		WP_000173586.1	DUF3404 domain-containing protein	100.0	57.6	97.8
MGA_2616	LOCUS_26020	sequence1:2988475..2989407(+)	frameshift		2989365	WP_000125097.1	proton-conducting transporter membrane subunit	95.2	59.2	95.6
MGA_2617	LOCUS_26030	sequence1:2989404..2989970(+)	frameshift		2989365	WP_000125097.1	proton-conducting transporter membrane subunit	100.0	37.8	98.4
MGA_2696	LOCUS_26820	sequence1:3071675..3072526(+)	partial			WP_012048348.1	Na/Pi cotransporter family protein	61.5	32.5	46.9
MGA_2715	LOCUS_27010	sequence1:3094097..3094366(+)	frameshift		3094345	WP_011268113.1	LysR family transcriptional regulator	92.1	27.4	46.3
MGA_2716	LOCUS_27020	sequence1:3094357..3095046(+)	frameshift		3094348	WP_011070732.1	LysR family transcriptional regulator	86.0	67.5	30.5
MGA_2717	LOCUS_27030	sequence1:3094988..3095803(-)	frameshift		3096057	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2718	LOCUS_27040	sequence1:3096022..3096522(-)	frameshift		3096057	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2720	LOCUS_27060	sequence1:3097572..3098936(+)	partial			WP_000019320.1	hypothetical protein	46.3	42.4	35.7
MGA_2721	LOCUS_27070	sequence1:3099082..3100122(+)	partial			WP_048065409.1	glycosyltransferase family 2 protein	65.6	52.7	33.0
MGA_2731	LOCUS_27170	sequence1:3105996..3106418(+)	partial			WP_177034907.1	group II intron reverse transcriptase/maturase	50.7	16.9	52.1
MGA_2732	LOCUS_27180	sequence1:3106465..3106965(+)	frameshift		3106929	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2733	LOCUS_27190	sequence1:3107184..3107999(+)	frameshift		3106929	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2734	LOCUS_27200	sequence1:3109113..3109769(+)	partial			WP_085973330.1	IS3-like element ISBj3 family transposase	90.4	52.1	60.4
MGA_2744	LOCUS_27300	sequence1:3119435..3119605(+)	partial			WP_011339059.1	LysR family transcriptional regulator	83.9	15.8	74.5
MGA_2752	LOCUS_27380	sequence1:3128821..3129924(-)	partial			WP_004199993.1	peptidase domain-containing ABC transporter	97.5	47.4	43.6
MGA_2761	LOCUS_27470	sequence1:3140502..3140711(-)	partial			WP_155655847.1	YkgJ family cysteine cluster protein	97.1	68.4	73.1
MGA_2777	LOCUS_27630	sequence1:3161073..3161315(-)	partial			WP_011103977.1	IS66 family insertion sequence element accessory protein TnpB	86.2	58.0	43.5
MGA_2780	LOCUS_27660	sequence1:3165369..3165869(+)	frameshift		3165833	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2781	LOCUS_27670	sequence1:3166088..3166903(+)	frameshift		3165833	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2783	LOCUS_27690	sequence1:3167929..3168729(-)	frameshift		3168794	WP_085973330.1	IS3-like element ISBj3 family transposase	97.4	68.5	54.8
MGA_2792	LOCUS_27780	sequence1:3175764..3176579(-)	frameshift		3176833	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2793	LOCUS_27790	sequence1:3176798..3177298(-)	frameshift		3176833	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2796	LOCUS_27820	sequence1:3179104..3179904(-)	frameshift		3179969	WP_085973330.1	IS3-like element ISBj3 family transposase	97.4	68.5	54.8
MGA_2799	LOCUS_27850	sequence1:3180801..3181367(-)	partial			WP_069687280.1	hypothetical protein	55.3	36.4	38.7
MGA_2806	LOCUS_27920	sequence1:3184756..3185256(+)	frameshift		3185220	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2807	LOCUS_27930	sequence1:3185475..3186290(+)	frameshift		3185220	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2815	LOCUS_28010	sequence1:3194331..3194831(+)	frameshift		3194795	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2816	LOCUS_28020	sequence1:3195050..3195865(+)	frameshift		3194795	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2823	LOCUS_28090	sequence1:3204672..3204827(-)	partial			WP_000861987.1	type II toxin-antitoxin system Phd/YefM family antitoxin	92.2	55.3	87.2
MGA_2826	LOCUS_28120	sequence1:3206181..3206414(-)	partial			WP_000861987.1	type II toxin-antitoxin system Phd/YefM family antitoxin	51.9	47.1	97.5
MGA_2837	LOCUS_28230	sequence1:3230298..3231113(-)	frameshift		3231367	WP_086016636.1	IS3 family transposase	98.9	53.2	57.5
MGA_2838	LOCUS_28240	sequence1:3231332..3231832(-)	frameshift		3231367	WP_086016636.1	IS3 family transposase	93.4	29.6	45.2
MGA_2839	LOCUS_28250	sequence1:3232880..3233446(+)	partial			WP_069687280.1	hypothetical protein	55.3	36.4	38.7
MGA_2840	LOCUS_28260	sequence1:3233600..3234124(+)	partial			WP_014207956.1	DUF924 family protein	77.0	74.9	57.5
MGA_2843	LOCUS_28290	sequence1:3235478..3236170(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	92.6	56.8	55.6
MGA_2844	LOCUS_28300	sequence1:3236503..3236745(+)	partial			WP_005462158.1	RidA family protein	100.0	65.0	96.2
MGA_2887	LOCUS_28710	sequence2:47619..48008(-)	partial			WP_001894072.1	translation initiation factor IF-3	100.0	70.5	86.0
MGA_2973	LOCUS_29570	sequence2:153924..155396(-)	internal_stop_codon	155490..155492(-)		WP_005478902.1	efflux RND transporter permease subunit VmeI	99.6	47.2	85.9
MGA_2974	LOCUS_29580	sequence2:155490..157031(-)	internal_stop_codon	155490..155492(-)		WP_005478902.1	efflux RND transporter permease subunit VmeI	98.4	48.9	89.5
MGA_2976	LOCUS_29600	sequence2:158111..158827(-)	partial			WP_001044382.1	efflux RND transporter periplasmic adaptor subunit	100.0	69.1	67.6
MGA_2980	LOCUS_29640	sequence2:161850..162176(-)	partial			WP_000941132.1	YjaG family protein	98.1	54.4	85.8
MGA_3053	LOCUS_30370	sequence2:234450..234890(+)	internal_stop_codon	234888..234890(+)		WP_005054087.1	IS256-like element ISSod4 family transposase	99.3	36.2	69.0
MGA_3054	LOCUS_30380	sequence2:235192..235434(+)	frameshift,internal_stop_codon	235444..235446(+),235450..235452(+)	235380	WP_011073229.1	IS256-like element ISSod5 family transposase	78.8	15.7	77.8
MGA_3108	LOCUS_30920	sequence2:300674..301054(+)	partial			WP_005482409.1	disulfide bond formation protein DsbB	100.0	70.8	77.8
MGA_3156	LOCUS_31400	sequence2:351895..352410(+)	frameshift		352395	WP_005461750.1	ion transporter	90.1	54.0	77.9
MGA_3157	LOCUS_31410	sequence2:352416..352793(+)	frameshift		352398	WP_005461750.1	ion transporter	96.0	42.1	80.8
MGA_3211	LOCUS_31950	sequence2:412881..418184(-)	partial			WP_005479472.1	FimV/HubP family polar landmark protein	71.8	81.8	26.9
MGA_3220	LOCUS_32040	sequence2:426524..427171(-)	frameshift		427188	WP_006312730.1	SDR family oxidoreductase	98.1	83.2	35.7
MGA_3221	LOCUS_32050	sequence2:427353..427922(+)	partial			WP_011036627.1	LysR family transcriptional regulator	91.5	50.3	36.4
MGA_3256	LOCUS_32400	sequence2:464642..465409(-)	frameshift		465435	WP_005457645.1	flagellar biosynthesis protein FlhB	100.0	67.8	89.0
MGA_3257	LOCUS_32410	sequence2:465388..465771(-)	frameshift		465435	WP_005457645.1	flagellar biosynthesis protein FlhB	91.3	30.9	76.7
MGA_3288	LOCUS_32720	sequence2:492883..493107(+)	frameshift		492806	WP_005457702.1	ArsC family reductase	100.0	63.8	77.0
MGA_3373	LOCUS_33570	sequence2:576494..576685(+)	internal_stop_codon	576683..576685(+)		WP_001140219.1	peptidylprolyl isomerase	88.9	30.8	67.9
MGA_3374	LOCUS_33580	sequence2:576695..577051(+)	internal_stop_codon	576683..576685(+)		WP_001140219.1	peptidylprolyl isomerase	100.0	64.8	68.6
MGA_3514	LOCUS_34980	sequence2:753987..754706(+)	frameshift		754679	WP_005479682.1	type II secretion system F family protein	97.1	58.7	71.7
MGA_3515	LOCUS_34990	sequence2:754706..755212(+)	frameshift		754679	WP_005479682.1	type II secretion system F family protein	99.4	41.0	77.8
MGA_3610	LOCUS_35940	sequence2:854157..855344(-)	internal_stop_codon	855351..855353(-)		WP_005482428.1	NAD-dependent succinate-semialdehyde dehydrogenase	99.5	82.4	68.2
MGA_3611	LOCUS_35950	sequence2:855351..855587(-)	internal_stop_codon	855351..855353(-)		WP_005482428.1	NAD-dependent succinate-semialdehyde dehydrogenase	100.0	16.4	43.6
MGA_3615	LOCUS_35970	sequence2:863931..864296(-)	internal_stop_codon	864309..864311(-)		WP_111221702.1	IS3 family transposase	94.2	58.5	63.2
MGA_3616	LOCUS_35980	sequence2:864309..864731(-)	frameshift,internal_stop_codon	864308..864310(-)	864784	WP_121450865.1	IS3 family transposase	100.0	37.4	56.4
MGA_3629	LOCUS_36110	sequence2:878501..879007(+)	partial			WP_005455096.1	bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase	96.4	53.8	66.0
MGA_3671	LOCUS_36530	sequence2:928654..929019(-)	internal_stop_codon	929032..929034(-)		WP_111221702.1	IS3 family transposase	94.2	58.5	63.2
MGA_3672	LOCUS_36540	sequence2:929032..929454(-)	frameshift,internal_stop_codon	929031..929033(-)	929507	WP_121450865.1	IS3 family transposase	100.0	37.4	56.4
MGA_3674	LOCUS_36560	sequence2:930567..931331(+)	partial			WP_011262056.1	type II toxin-antitoxin system HipA family toxin	96.9	56.3	44.4
MGA_3682	LOCUS_36640	sequence2:937503..939164(-)	partial			WP_011815730.1	DNA-binding protein	89.5	72.7	23.4
MGA_3735	LOCUS_37170	sequence2:995665..996381(+)	partial			WP_005479666.1	DUF2796 domain-containing protein	45.8	51.7	62.4
MGA_3793	LOCUS_37750	sequence2:1037736..1037972(-)	frameshift		1038022	WP_005480060.1	glutathione-regulated potassium-efflux system protein KefB	97.4	12.7	88.2
MGA_3794	LOCUS_37760	sequence2:1037963..1039252(-)	frameshift		1038022,1039271	WP_005480060.1	glutathione-regulated potassium-efflux system protein KefB	95.3	68.4	72.1
MGA_3795	LOCUS_37770	sequence2:1039206..1039535(-)	frameshift		1039271	WP_005480060.1	glutathione-regulated potassium-efflux system protein KefB	80.7	14.7	83.0
MGA_3809	LOCUS_37910	sequence2:1055347..1056384(-)	partial			WP_011261643.1	porin	73.3	69.0	28.8
MGA_3865	LOCUS_38470	sequence2:1119190..1119543(-)	frameshift		1119508	WP_000340298.1	potassium/proton antiporter	86.3	17.4	69.3
MGA_3866	LOCUS_38480	sequence2:1119482..1120948(-)	frameshift		1119508	WP_005478599.1	potassium/proton antiporter	99.2	83.3	87.4
MGA_3888	LOCUS_38700	sequence2:1147358..1148248(+)	partial			WP_045861227.1	restriction endonuclease subunit S	100.0	68.7	40.6
MGA_3892	LOCUS_38740	sequence2:1153579..1153839(-)	partial			WP_011070748.1	site-specific integrase	73.3	14.7	65.1
MGA_3921	LOCUS_39030	sequence2:1187570..1187926(+)	frameshift		1187541	WP_011072286.1	IS630-like element ISSod10 family transposase	97.5	33.7	55.7
MGA_3922	LOCUS_39040	sequence2:1187959..1188435(+)	frameshift		1188423	WP_011072286.1	IS630-like element ISSod10 family transposase	96.2	44.6	47.4
MGA_3923	LOCUS_39050	sequence2:1188566..1188994(+)	frameshift		1188423	WP_011072286.1	IS630-like element ISSod10 family transposase	100.0	41.6	60.6
