{ "type": "genome", "identifier": "GCF_000764655.1", "organism": "Aeromonas aquatica", "title": "Aeromonas aquatica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Auburn University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000764655.1", "bioproject": "PRJNA224116", "biosample": "SAMN03023875", "wgs_master": "JRGL00000000.1", "refseq_category": "reference genome", "taxid": "558964", "species_taxid": "558964", "organism_name": "Aeromonas aquatica", "infraspecific_name": "strain=AE235", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/10/08", "asm_name": "ASM76465v1", "asm_submitter": "Auburn University", "gbrs_paired_asm": "GCA_000764655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/764/655/GCF_000764655.1_ASM76465v1", "excluded_from_refseq": "na", "relation_to_type_material": 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[], "data_size": "1.290 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 99.48, "contamination": 0.46, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4582304", "Number of Sequences": "171", "Longest Sequences (bp)": "206895", "N50 (bp)": "67531", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.2", "Number of CDSs": "4094", "Average Protein Length": "311.6", "Coding Ratio (%)": "83.5", "Number of rRNAs": "3", "Number of tRNAs": "84", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aeromonas aquatica", "strain": "strain=AE235", "accession": "GCA_000764655.1", "taxid": 558964, "species_taxid": 558964, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1438, "total_fragments": 1444, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Aeromonas eucrenophila", "strain": "strain=CECT 4224", "accession": "GCA_000819865.1", "taxid": 649, "species_taxid": 649, "relation_to_type": "type", "validated": true, "ani": 93.9982, "matched_fragments": 1303, "total_fragments": 1444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas encheleia", "strain": "strain=NCTC12917", "accession": "GCA_900637545.1", "taxid": 73010, "species_taxid": 73010, "relation_to_type": "type", "validated": true, "ani": 91.3809, "matched_fragments": 1250, "total_fragments": 1444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas encheleia", "strain": "strain=CECT 4342", "accession": "GCA_000819825.1", "taxid": 73010, "species_taxid": 73010, "relation_to_type": "type", "validated": true, "ani": 91.3321, "matched_fragments": 1264, "total_fragments": 1444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas lusitana", "strain": "strain=MDC 2473", 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76.5574, "matched_fragments": 118, "total_fragments": 1444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 76.5501, "matched_fragments": 181, "total_fragments": 1444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalobacter thiocyanaticus", "strain": "strain=Hrh1", "accession": "GCA_003932505.1", "taxid": 585455, "species_taxid": 585455, "relation_to_type": "type", "validated": true, "ani": 76.4128, "matched_fragments": 98, "total_fragments": 1444, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.48, "contamination": 0.46, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000764655.1", "gtdb_species": "s__Aeromonas aquatica", "ani": 100.0, "matched_fragments": 1438, "total_fragments": 1444, 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