{ "type": "genome", "identifier": "GCF_000766885.2", "organism": "Corynebacterium camporealensis", "title": "Corynebacterium camporealensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "UFMG Brazil", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000766885.2", "bioproject": "PRJNA224116", "biosample": "SAMN03092874", "wgs_master": "na", "refseq_category": "na", "taxid": "161896", "species_taxid": "161896", "organism_name": "Corynebacterium camporealensis", "infraspecific_name": "strain=CIP 105508", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/03/05", "asm_name": "ASM76688v2", "asm_submitter": "UFMG Brazil", "gbrs_paired_asm": "GCA_000766885.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/766/885/GCF_000766885.2_ASM76688v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2450029", "genome_size_ungapped": "2450029", "gc_percent": "59.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000766885.2-RS_2024_05_17", "annotation_date": "2024-05-17", "total_gene_count": "2349", "protein_coding_gene_count": "2087", "non_coding_gene_count": "65", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-03-05", "dateModified": "2018-03-05", "datePublished": "2018-03-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Corynebacterium camporealensis" ], "sample_taxid": [ "161896" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Spain" ], "sample_host_location_id": [], "data_size": "0.692 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.37, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2450029", "Number of Sequences": "1", "Longest Sequences (bp)": "2450029", "N50 (bp)": "2450029", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "59.4", "Number of CDSs": "2403", "Average Protein Length": "304.5", "Coding Ratio (%)": "89.6", "Number of rRNAs": "12", "Number of tRNAs": "51", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Corynebacterium camporealensis", "strain": "strain=CIP 105508", "accession": "GCA_000766885.2", "taxid": 161896, "species_taxid": 161896, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 814, "total_fragments": 816, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium camporealensis", "strain": "strain=DSM 44610", "accession": "GCA_000980815.1", "taxid": 161896, "species_taxid": 161896, "relation_to_type": "type", "validated": true, "ani": 99.9602, "matched_fragments": 812, "total_fragments": 816, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium tuberculostearicum", "strain": "strain=FDAARGOS_1117", "accession": "GCA_016728365.1", "taxid": 38304, "species_taxid": 38304, "relation_to_type": "type", "validated": true, "ani": 79.9285, "matched_fragments": 317, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium tuberculostearicum", "strain": "strain=DSM 44922", "accession": "GCA_013408445.1", "taxid": 38304, "species_taxid": 38304, "relation_to_type": "type", "validated": true, "ani": 79.8012, "matched_fragments": 329, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium aurimucosum", "strain": "strain=FDAARGOS_1109", "accession": "GCA_016728705.1", "taxid": 169292, "species_taxid": 169292, "relation_to_type": "suspected-type", "validated": true, "ani": 79.6504, "matched_fragments": 321, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=NCTC10288", "accession": "GCA_900478045.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.5297, "matched_fragments": 323, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium aurimucosum", "strain": "strain=DSM 44532", "accession": "GCA_024138775.1", "taxid": 169292, "species_taxid": 169292, "relation_to_type": "suspected-type", "validated": true, "ani": 79.499, "matched_fragments": 313, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=NBRC 15361", "accession": "GCA_001552395.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.3041, "matched_fragments": 313, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium minutissimum", "strain": "strain=ATCC 23348", "accession": "GCA_000805675.1", "taxid": 38301, "species_taxid": 38301, "relation_to_type": "type", "validated": true, "ani": 79.2905, "matched_fragments": 311, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium phoceense", "strain": "strain=MC1", "accession": "GCA_900092335.1", "taxid": 1686286, "species_taxid": 1686286, "relation_to_type": "type", "validated": true, "ani": 79.2808, "matched_fragments": 317, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium massiliense", "strain": "strain=DSM 45435", "accession": "GCA_000420605.1", "taxid": 441501, "species_taxid": 441501, "relation_to_type": "type", "validated": true, "ani": 79.1173, "matched_fragments": 262, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium ammoniagenes", "strain": "strain=DSM 20306 = 9.6", "accession": "GCA_001941425.1", "taxid": 1697, "species_taxid": 1697, "relation_to_type": "type", "validated": true, "ani": 78.7464, "matched_fragments": 219, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=YIM 70093 = DSM 44683", "accession": "GCA_000341345.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 78.6841, "matched_fragments": 273, "total_fragments": 816, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium stationis", "strain": "strain=622=DSM 20302", 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