{ "type": "genome", "identifier": "GCF_000767055.1", "organism": "Corynebacterium doosanense CAU 212 = DSM 45436", "title": "Corynebacterium doosanense CAU 212 = DSM 45436", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Bielefeld University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000767055.1", "bioproject": "PRJNA224116", "biosample": "SAMN02356458", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "558173", "species_taxid": "1121358", "organism_name": "Corynebacterium doosanense CAU 212 = DSM 45436", "infraspecific_name": "strain=CAU 212(T)", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/10/16", "asm_name": "ASM76705v1", "asm_submitter": "Bielefeld University", "gbrs_paired_asm": "GCA_000767055.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/767/055/GCF_000767055.1_ASM76705v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2698995", "genome_size_ungapped": "2698995", "gc_percent": "67.000000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000767055.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "2665", "protein_coding_gene_count": "2545", "non_coding_gene_count": "67", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-10-16", "dateModified": "2014-10-16", "datePublished": "2014-10-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Corynebacterium doosanense CAU 212 = DSM 45436" ], "sample_taxid": [ "558173" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "0.741 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2698995", "Number of Sequences": "2", "Longest Sequences (bp)": "2671798", "N50 (bp)": "2671798", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "66.8", "Number of CDSs": "2646", "Average Protein Length": "310.3", "Coding Ratio (%)": "91.3", "Number of rRNAs": "12", "Number of tRNAs": "55", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Corynebacterium doosanense", "strain": "strain=CAU 212", "accession": "GCA_000767055.1", "taxid": 1121358, "species_taxid": 1121358, 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"ani": 79.9195, "matched_fragments": 452, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium yudongzhengii", "strain": "strain=2183", "accession": "GCA_003065405.1", "taxid": 2080740, "species_taxid": 2080740, "relation_to_type": "type", "validated": true, "ani": 79.8329, "matched_fragments": 433, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium vitaeruminis", "strain": "strain=DSM 20294", "accession": "GCA_000550805.1", "taxid": 38305, "species_taxid": 38305, "relation_to_type": "type", "validated": true, "ani": 79.8162, "matched_fragments": 333, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=DSM 44683", "accession": "GCA_000688435.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 79.7349, "matched_fragments": 453, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium frankenforstense", "strain": "strain=ST18", "accession": "GCA_001941485.1", "taxid": 1230998, "species_taxid": 1230998, "relation_to_type": "type", "validated": true, "ani": 79.7337, "matched_fragments": 417, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium pollutisoli", "strain": "strain=VDS11", "accession": "GCA_900177745.1", "taxid": 1610489, "species_taxid": 1610489, "relation_to_type": "type", "validated": true, "ani": 79.7181, "matched_fragments": 450, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium mycetoides", "strain": "strain=DSM 20632", "accession": "GCA_900103625.1", "taxid": 38302, "species_taxid": 38302, "relation_to_type": "type", "validated": true, "ani": 79.5841, "matched_fragments": 345, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium jeddahense", "strain": "strain=JCB", "accession": "GCA_000577555.1", "taxid": 1414719, "species_taxid": 1414719, "relation_to_type": "type", "validated": true, "ani": 79.3395, "matched_fragments": 320, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium uterequi", "strain": "strain=DSM 45634", "accession": "GCA_001021065.1", "taxid": 1072256, "species_taxid": 1072256, "relation_to_type": "type", "validated": true, "ani": 79.2067, "matched_fragments": 320, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium tapiri", "strain": "strain=LMG 28165", "accession": "GCA_006334925.1", "taxid": 1448266, "species_taxid": 1448266, "relation_to_type": "type", "validated": true, "ani": 78.6365, "matched_fragments": 320, "total_fragments": 899, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { 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