# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_14	LOCUS_00010	sequence014:43..231(-)	partial			WP_081026662.1	IS3 family transposase	98.4	26.1	65.6
MGA_20	LOCUS_00020	sequence020:1..635(+)	partial			WP_010890088.1	restriction endonuclease subunit S	99.0	52.1	26.8
MGA_22	LOCUS_00030	sequence021:73..393(-)	partial			WP_011674809.1	IS30 family transposase	99.1	32.5	57.4
MGA_24	LOCUS_00050	sequence023:188..505(+)	frameshift		611,499,559	WP_000091371.1	hypothetical protein	99.0	24.5	63.5
MGA_36	LOCUS_00150	sequence032:527..835(+)	partial			WP_002900660.1	hypothetical protein	96.1	42.4	39.4
MGA_41	LOCUS_00190	sequence033:395..676(+)	frameshift		640	WP_025015513.1	Cof-type HAD-IIB family hydrolase	77.4	27.0	58.3
MGA_42	LOCUS_00200	sequence033:649..1080(+)	partial			WP_011837041.1	hypothetical protein	32.9	25.7	97.9
MGA_61	LOCUS_00360	sequence037:4868..>5779(-)	partial			WP_012775056.1	LD-carboxypeptidase LdcB/DacB	59.7	72.1	69.6
MGA_62	LOCUS_00370	sequence038:513..668(-)	frameshift		757	WP_000411550.1	arsenate reductase (glutaredoxin)	100.0	37.8	62.7
MGA_63	LOCUS_00380	sequence038:674..901(-)	frameshift		760	WP_010922177.1	arsenate reductase (glutaredoxin)	64.0	32.9	70.8
MGA_64	LOCUS_00390	sequence038:984..1256(-)	partial			WP_041272757.1	thioredoxin family protein	83.3	64.1	50.7
MGA_79	LOCUS_00530	sequence040:1..967(+)	partial			WP_011836393.1	GBS Bsp-like repeat-containing protein	99.4	33.1	63.9
MGA_100	LOCUS_00740	sequence042:5231..7963(-)	partial			WP_011837665.1	type VII secretion protein EssC	97.6	60.9	67.5
MGA_107	LOCUS_00810	sequence043:4956..5309(+)	partial			WP_011837100.1	DUF5590 domain-containing protein	99.1	71.6	63.8
MGA_133	LOCUS_01070	sequence045:6258..6509(+)	partial			WP_150880979.1	ISL3 family transposase	97.6	20.6	69.0
MGA_219	LOCUS_01910	sequence049:16327..16641(-)	partial			WP_004194153.1	DNA-directed RNA polymerase subunit omega	62.5	62.5	96.9
MGA_230	LOCUS_02020	sequence050:1066..1272(-)	partial			WP_000031832.1	recombinase family protein	88.2	10.7	85.0
MGA_231	LOCUS_02030	sequence050:1477..1755(-)	frameshift,internal_stop_codon	1477..1479(-)	1732	WP_070606326.1	GntR family transcriptional regulator	96.7	76.1	87.6
MGA_232	LOCUS_02040	sequence050:1816..2037(-)	partial			WP_002898286.1	DUF1648 domain-containing protein	74.0	78.3	42.6
MGA_233	LOCUS_02050	sequence050:2057..2455(-)	partial			WP_000036818.1	hypothetical protein	98.5	25.1	68.5
MGA_239	LOCUS_02110	sequence050:5317..5502(+)	partial			WP_003426139.1	plasmid mobilization relaxosome protein MobC	77.0	40.5	91.5
MGA_242	LOCUS_02140	sequence050:6472..6762(-)	partial			WP_000914581.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	17.7	85.4
MGA_268	LOCUS_02400	sequence051:10544..10915(-)	internal_stop_codon	10931..10933(-)		WP_002673332.1	GNAT family N-acetyltransferase	100.0	84.2	56.9
MGA_290	LOCUS_02620	sequence052:1783..2148(+)	frameshift		2115	WP_002287457.1	DUF2798 domain-containing protein	86.0	70.3	43.3
MGA_316	LOCUS_02880	sequence052:29534..32386(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	81.7	57.8	54.0
MGA_357	LOCUS_03290	sequence052:72673..74277(+)	partial			WP_000416815.1	DUF2974 domain-containing protein	59.0	76.7	33.2
MGA_377	LOCUS_03490	sequence054:1..712(+)	partial			WP_002352221.1	cell surface antigen I/II	99.2	15.0	30.4
MGA_382	LOCUS_03540	sequence054:5559..12656(+)	partial			WP_207215633.1	MucBP domain-containing protein	34.8	71.9	36.1
MGA_389	LOCUS_03590	sequence057:28..2568(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	97.4	51.8	46.4
MGA_390	LOCUS_03600	sequence057:2594..3205(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	84.7	9.0	42.2
MGA_391	LOCUS_03610	sequence057:3132..3437(-)	frameshift,internal_stop_codon	3548..3550(-),3554..3556(-)	3562,3499,3556,3478	WP_011837563.1	Cna B-type domain-containing protein	86.1	5.1	51.7
MGA_392	LOCUS_03620	sequence057:3554..>4407(-)	partial			WP_012775559.1	FctA domain-containing protein	79.2	34.1	36.1
MGA_398	LOCUS_03660	sequence059:3183..3629(-)	partial			WP_002268365.1	helix-turn-helix transcriptional regulator	41.9	53.0	45.2
MGA_423	LOCUS_03890	sequence061:11175..11600(+)	partial			WP_012582992.1	type I-B CRISPR-associated endonuclease Cas1b	83.7	35.0	50.0
MGA_431	LOCUS_03970	sequence062:7042..7380(+)	internal_stop_codon	6823..6825(+)		WP_002901757.1	DUF6287 domain-containing protein	98.2	55.0	70.0
MGA_438	LOCUS_04030	sequence063:4554..4745(-)	frameshift		4810	WP_002911920.1	ABC transporter ATP-binding protein	100.0	25.5	74.6
MGA_443	LOCUS_04080	sequence063:8721..8909(+)	partial			WP_011837109.1	hypothetical protein	98.4	67.0	83.6
MGA_447	LOCUS_04120	sequence063:11334..11552(-)	partial			WP_011836624.1	Rgg/GadR/MutR family transcriptional regulator	75.0	18.7	55.6
MGA_470	LOCUS_04350	sequence063:33610..35187(+)	partial			WP_138431871.1	AAA family ATPase	67.4	63.3	44.9
MGA_484	LOCUS_04490	sequence064:1..508(+)	partial			WP_000679939.1	LPXTG-anchored beta-N-acetylhexosaminidase StrH	97.6	14.1	31.6
MGA_525	LOCUS_04880	sequence066:40424..40747(-)	partial			WP_001865562.1	hypothetical protein	100.0	57.5	44.9
MGA_562	LOCUS_05250	sequence067:19764..21287(-)	partial			WP_000777402.1	SpaH/EbpB family LPXTG-anchored major pilin	75.9	72.0	33.0
MGA_567	LOCUS_05290	sequence068:4549..5373(+)	partial			WP_018372426.1	SHIRT domain-containing protein	35.0	14.4	50.5
MGA_610	LOCUS_05720	sequence069:37354..37488(-)	partial			WP_000831905.1	50S ribosomal protein L34	59.1	59.1	96.2
MGA_611	LOCUS_05730	sequence069:37749..38066(-)	frameshift		37738,37757	WP_011837572.1	hypothetical protein	98.1	75.7	42.1
MGA_615	LOCUS_05760	sequence070:51..206(+)	partial			WP_012775212.1	ISL3 family transposase	94.1	14.4	70.0
MGA_675	LOCUS_06360	sequence072:48194..49723(+)	partial			WP_011837728.1	YfhO family protein	99.6	58.9	66.5
MGA_676	LOCUS_06370	sequence072:49938..50120(-)	frameshift,internal_stop_codon	49936..49938(-),49888..49890(-),49837..49839(-)	50241,50175	WP_140860145.1	IS3 family transposase	100.0	13.4	76.7
MGA_677	LOCUS_06380	sequence072:50200..50388(-)	frameshift,internal_stop_codon	50624..50626(-),49934..49936(-)	50173,50455,50239,50647	WP_165694720.1	IS3-like element IS861 family transposase	79.0	10.9	79.6
MGA_679	LOCUS_06400	sequence072:50703..50891(-)	frameshift,internal_stop_codon	50916..50918(-),51004..51006(-)	50756,50982,50687	WP_081026662.1	IS3 family transposase	95.2	25.2	61.0
MGA_748	LOCUS_07050	sequence078:278..610(+)	partial			WP_120770310.1	ISL3 family transposase	56.4	14.8	88.7
MGA_766	LOCUS_07220	sequence080:7955..8284(+)	internal_stop_codon	8282..8284(+)		WP_002305939.1	IS30 family transposase	100.0	34.2	47.7
MGA_771	LOCUS_07270	sequence081:3932..4150(+)	partial			WP_000167729.1	DUF6261 family protein	100.0	30.8	76.9
MGA_777	LOCUS_07330	sequence081:13636..13800(+)	internal_stop_codon	13798..13800(+)		WP_000429941.1	YbgA family protein	98.1	39.6	83.0
MGA_778	LOCUS_07340	sequence081:13846..14040(+)	internal_stop_codon	13798..13800(+)		WP_000429941.1	YbgA family protein	95.3	45.5	72.1
MGA_779	LOCUS_07350	sequence081:14129..14383(+)	frameshift		14124,14079	WP_000625408.1	TIGR02328 family protein	98.8	73.5	77.1
MGA_850	LOCUS_08060	sequence081:83714..84670(-)	frameshift		84665,83734	WP_011837462.1	D-alanyl-D-alanine carboxypeptidase PBP3	98.1	70.9	60.6
MGA_851	LOCUS_08070	sequence081:84636..84896(-)	frameshift		84665	WP_011837462.1	D-alanyl-D-alanine carboxypeptidase PBP3	79.1	16.2	66.2
MGA_917	LOCUS_08720	sequence084:34..168(-)	partial			WP_002923661.1	PRD domain-containing protein	81.8	13.0	86.1
MGA_965	LOCUS_09200	sequence084:44664..45029(-)	partial			WP_002895005.1	lipopolysaccharide biosynthesis protein	86.0	24.5	43.3
MGA_984	LOCUS_09390	sequence084:69420..69941(-)	partial			WP_005694527.1	restriction endonuclease subunit S	97.7	37.3	49.4
MGA_989	LOCUS_09440	sequence084:75906..77087(+)	partial			WP_002680450.1	TPM domain-containing protein	30.3	48.6	40.5
MGA_1018	LOCUS_09700	sequence087:297..746(+)	partial			WP_011836412.1	low temperature requirement protein A	100.0	39.1	85.9
MGA_1026	LOCUS_09780	sequence087:9579..11666(-)	partial			WP_002263413.1	GH32 C-terminal domain-containing protein	38.1	18.3	32.3
MGA_1084	LOCUS_10360	sequence089:6173..6850(+)	partial			WP_032909647.1	type II CAAX endopeptidase family protein	73.3	67.1	38.3
MGA_1094	LOCUS_10460	sequence090:6897..7088(+)	internal_stop_codon	7086..7088(+)		WP_000699614.1	response regulator transcription factor	100.0	28.3	69.8
MGA_1095	LOCUS_10470	sequence090:7122..7574(+)	internal_stop_codon	7086..7088(+)		WP_000699614.1	response regulator transcription factor	97.3	65.5	59.6
MGA_1097	LOCUS_10490	sequence090:7763..8881(+)	frameshift		7773	WP_000898853.1	HAMP domain-containing sensor histidine kinase	98.9	81.7	41.0
MGA_1110	LOCUS_10620	sequence091:2647..3117(+)	partial			WP_000460271.1	DUF3021 domain-containing protein	55.8	64.2	38.6
MGA_1134	LOCUS_10850	sequence092:273..1454(+)	frameshift		1424	WP_004187811.1	penicillin-binding protein PBP2B	97.7	55.8	84.4
MGA_1135	LOCUS_10860	sequence092:1528..2229(+)	frameshift		1427	WP_004187811.1	penicillin-binding protein PBP2B	100.0	34.0	77.8
MGA_1140	LOCUS_10910	sequence092:6134..6385(+)	frameshift		6382	WP_009910909.1	DUF1697 domain-containing protein	98.8	46.6	53.7
MGA_1146	LOCUS_10970	sequence093:1487..1960(+)	frameshift		1951	WP_002899938.1	cell wall metabolism sensor histidine kinase VicK	100.0	35.0	91.7
MGA_1147	LOCUS_10980	sequence093:1957..2841(+)	frameshift		1951	WP_002899938.1	cell wall metabolism sensor histidine kinase VicK	98.3	64.4	92.4
MGA_1188	LOCUS_11380	sequence095:5586..6425(-)	partial			WP_002263013.1	hypothetical protein	45.2	55.0	42.1
MGA_1210	LOCUS_11600	sequence096:16276..18045(+)	partial			WP_012258140.1	TIGR03986 family CRISPR-associated RAMP protein	28.9	24.9	29.9
MGA_1235	LOCUS_11850	sequence096:41128..42165(+)	partial			WP_000808422.1	hypothetical protein	56.5	56.2	26.1
MGA_1236	LOCUS_11860	sequence096:42191..43912(+)	partial			WP_002263022.1	hypothetical protein	62.1	60.2	27.5
MGA_1290	LOCUS_12390	sequence097:7659..8024(-)	partial			WP_011837349.1	MGMT family protein	55.4	65.7	80.6
MGA_1332	LOCUS_12810	sequence098:6202..7200(+)	partial			WP_011103073.1	restriction endonuclease subunit S	50.3	46.7	32.0
MGA_1371	LOCUS_13200	sequence100:3851..4093(-)	partial			WP_011836796.1	SP_0198 family lipoprotein	62.5	32.3	86.0
MGA_1396	LOCUS_13450	sequence101:15817..16788(+)	partial			WP_051618796.1	GTP pyrophosphokinase family protein	69.0	60.0	39.9
MGA_1425	LOCUS_13740	sequence102:7881..8171(+)	frameshift		7875	WP_000721460.1	alpha-L-fucosidase	93.8	16.1	68.9
MGA_1431	LOCUS_13800	sequence102:12647..13102(-)	frameshift,internal_stop_codon	12646..12648(-),13219..13221(-)	13212	WP_055164393.1	IS30 family transposase	100.0	48.7	62.1
MGA_1460	LOCUS_14090	sequence104:4787..5386(-)	frameshift		5430	WP_002894386.1	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	99.5	64.8	75.0
MGA_1461	LOCUS_14100	sequence104:5395..5703(-)	frameshift		5430	WP_002894386.1	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	89.2	30.2	95.6
MGA_1556	LOCUS_15040	sequence106:49575..52547(-)	partial			WP_011476404.1	Xaa-Pro dipeptidyl-peptidase	69.0	83.0	30.8
MGA_1582	LOCUS_15300	sequence106:79184..80020(-)	partial			WP_002904720.1	ZIP family manganese transporter TmpA	71.2	72.3	93.4
MGA_1591	LOCUS_15390	sequence107:96..272(-)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1615	LOCUS_15630	sequence107:24913..28602(-)	partial			WP_012775522.1	GbpC/Spa domain-containing protein	93.5	74.2	30.5
MGA_1620	LOCUS_15680	sequence107:33248..34186(-)	partial			WP_075141044.1	replication initiator protein A	61.5	56.1	38.0
MGA_1625	LOCUS_15730	sequence107:38202..38585(-)	partial			WP_105158881.1	replication initiator protein A	78.0	37.5	36.2
MGA_1637	LOCUS_15850	sequence107:48312..51461(-)	partial			WP_011476607.1	type IV secretory system conjugative DNA transfer family protein	71.2	77.0	37.6
MGA_1642	LOCUS_15900	sequence107:55356..59183(-)	partial			WP_012775522.1	GbpC/Spa domain-containing protein	94.5	74.0	28.5
MGA_1650	LOCUS_15980	sequence107:70751..73117(-)	partial			WP_000520455.1	MobP2 family relaxase	46.2	84.6	27.2
MGA_1653	LOCUS_16010	sequence107:74176..74967(-)	partial			WP_002296505.1	DNA/RNA non-specific endonuclease	74.1	77.2	57.7
MGA_1691	LOCUS_16390	sequence107:103628..103792(+)	frameshift,internal_stop_codon	103790..103792(+)	103813	WP_011836763.1	metallophosphoesterase	83.3	15.7	86.7
MGA_1756	LOCUS_17040	sequence109:6003..6368(+)	internal_stop_codon	6366..6368(+)		WP_010947340.1	GNAT family N-acetyltransferase	97.5	68.0	35.3
MGA_1759	LOCUS_17070	sequence109:8306..10063(+)	partial			WP_011836518.1	excinuclease ABC subunit UvrA	93.2	57.8	96.9
MGA_1760	LOCUS_17080	sequence109:9982..11070(+)	partial			WP_011836518.1	excinuclease ABC subunit UvrA	100.0	38.4	96.1
MGA_1776	LOCUS_17240	sequence109:31400..31540(+)	frameshift,internal_stop_codon	31613..31615(+),31658..31660(+),31598..31600(+)	31537	WP_011836527.1	ABC transporter ATP-binding protein	95.7	7.5	79.5
MGA_1793	LOCUS_17410	sequence110:6352..8244(+)	partial			WP_011836587.1	EndoU domain-containing protein	32.7	34.6	30.6
MGA_1796	LOCUS_17440	sequence110:10207..11583(+)	frameshift		11532	WP_011837078.1	excinuclease ABC subunit UvrB	98.0	67.8	97.3
MGA_1797	LOCUS_17450	sequence110:11592..12197(+)	frameshift		11532	WP_011837078.1	excinuclease ABC subunit UvrB	100.0	30.4	98.5
MGA_1822	LOCUS_17700	sequence110:35064..35222(+)	partial			WP_002895966.1	hypothetical protein	69.2	67.9	94.4
MGA_1833	LOCUS_17810	sequence111:11702..11896(+)	frameshift		11582	WP_120719250.1	hypothetical protein	93.8	43.8	60.0
MGA_1834	LOCUS_17820	sequence111:11908..12114(+)	partial			WP_002900787.1	helix-turn-helix transcriptional regulator	98.5	62.0	89.6
MGA_1845	LOCUS_17930	sequence111:22123..22344(+)	frameshift		22067	WP_002894965.1	PspC domain-containing protein	100.0	75.5	83.8
MGA_1870	LOCUS_18180	sequence112:8423..9109(-)	internal_stop_codon	9146..9148(-)		WP_000182421.1	nucleoside-triphosphate diphosphatase	100.0	70.6	85.1
MGA_1871	LOCUS_18190	sequence112:9146..9391(-)	internal_stop_codon	9146..9148(-)		WP_000182421.1	nucleoside-triphosphate diphosphatase	97.5	23.8	50.6
MGA_1949	LOCUS_18960	sequence114:15237..17174(-)	partial			WP_002852392.1	HAD-IA family hydrolase	50.7	32.6	25.3
MGA_1982	LOCUS_19290	sequence114:47267..47641(-)	frameshift		47639	WP_005592074.1	type II CAAX endopeptidase family protein	100.0	56.6	83.9
MGA_1983	LOCUS_19300	sequence114:47619..47927(-)	frameshift		47639	WP_005592074.1	type II CAAX endopeptidase family protein	98.0	45.7	89.0
MGA_1986	LOCUS_19330	sequence114:49257..49421(+)	internal_stop_codon	49419..49421(+)		WP_011837648.1	helix-turn-helix transcriptional regulator	100.0	32.1	94.4
MGA_1987	LOCUS_19340	sequence114:49422..49760(+)	internal_stop_codon	49419..49421(+)		WP_011837648.1	helix-turn-helix transcriptional regulator	100.0	67.3	80.5