{ "type": "genome", "identifier": "GCF_000787375.1", "organism": "Halalkalibacter okhensis", "title": "Halalkalibacter okhensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Hyderabad", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000787375.1", "bioproject": "PRJNA224116", "biosample": "SAMN03074851", "wgs_master": "JRJU00000000.1", "refseq_category": "reference genome", "taxid": "333138", "species_taxid": "333138", "organism_name": "Halalkalibacter okhensis", "infraspecific_name": "strain=Kh10-101", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/11/26", "asm_name": "ASM78737v1", "asm_submitter": "University of Hyderabad", "gbrs_paired_asm": "GCA_000787375.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/787/375/GCF_000787375.1_ASM78737v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4865284", "genome_size_ungapped": "4865284", "gc_percent": "38.000000", "replicon_count": "0", "scaffold_count": "98", "contig_count": "98", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000787375.1-RS_2024_09_02", "annotation_date": "2024-09-02", "total_gene_count": "5003", "protein_coding_gene_count": "4734", "non_coding_gene_count": "171", "pubmed_id": "26697400" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-11-26", "dateModified": "2014-11-26", "datePublished": "2014-11-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Halalkalibacter okhensis" ], "sample_taxid": [ "333138" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "India: Port of 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null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_genome_taxon": [ "Halalkalibacter", "okhensis" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }