{
    "type": "genome",
    "identifier": "GCF_000802235.1",
    "organism": "Sinomonas humi",
    "title": "Sinomonas humi",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Malaya",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000802235.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN03070057",
        "wgs_master": "JTDL00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1338436",
        "species_taxid": "1338436",
        "organism_name": "Sinomonas humi",
        "infraspecific_name": "strain=MUSC 117",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/12/16",
        "asm_name": "ASM80223v1",
        "asm_submitter": "University of Malaya",
        "gbrs_paired_asm": "GCA_000802235.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/802/235/GCF_000802235.1_ASM80223v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4416081",
        "genome_size_ungapped": "4416081",
        "gc_percent": "67.000000",
        "replicon_count": "0",
        "scaffold_count": "156",
        "contig_count": "156",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000802235.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "4209",
        "protein_coding_gene_count": "4073",
        "non_coding_gene_count": "62",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-12-16",
    "dateModified": "2014-12-16",
    "datePublished": "2014-12-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sinomonas humi"
        ],
        "sample_taxid": [
            "1338436"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Malaysia"
        ],
        "sample_host_location_id": [],
        "data_size": "1.224 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
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            "max": 28.0
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4416081",
        "Number of Sequences": "156",
        "Longest Sequences (bp)": "294406",
        "N50 (bp)": "111730",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "67.2",
        "Number of CDSs": "4036",
        "Average Protein Length": "318.3",
        "Coding Ratio (%)": "87.3",
        "Number of rRNAs": "3",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sinomonas humi",
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            },
            {
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                "species_taxid": 1324851,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sinomonas albida",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Sinomonas mesophila",
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                "taxid": 1531955,
                "species_taxid": 1531955,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6498,
                "matched_fragments": 619,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sinomonas atrocyanea",
                "strain": "strain=CGMCC 1.1891",
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                "relation_to_type": "type",
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                "ani": 80.3059,
                "matched_fragments": 650,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sinomonas atrocyanea",
                "strain": "strain=NBRC 12956",
                "accession": "GCA_006539205.1",
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                "ani": 80.2371,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sinomonas notoginsengisoli",
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                "accession": "GCA_021554725.1",
                "taxid": 1457311,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 520,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter sedimenti",
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                "accession": "GCA_011750795.2",
                "taxid": 2694931,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter mobilis",
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                "accession": "GCA_012395835.1",
                "taxid": 2724944,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7526,
                "matched_fragments": 273,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter agilis",
                "strain": "strain=DSM 20550",
                "accession": "GCA_006494655.1",
                "taxid": 37921,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 262,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter ulcerisalmonis",
                "strain": "",
                "accession": "GCA_900609065.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Georgenia wutianyii",
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                "accession": "GCA_006349365.1",
                "taxid": 2585135,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 196,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_000802235.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
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        ]
    },
    "_bac2feature": {
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}