{ "tc_result": [ { "organism_name": "Pseudomonas flexibilis", "strain": "strain=ATCC 29606", "accession": "GCA_000802425.1", "taxid": 706570, "species_taxid": 706570, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1227, "total_fragments": 1229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas flexibilis", "strain": "strain=ATCC 29606", "accession": "GCA_900155995.1", "taxid": 706570, "species_taxid": 706570, "relation_to_type": "type", "validated": true, "ani": 99.9936, "matched_fragments": 1221, "total_fragments": 1229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas oryzae", "strain": "strain=KCTC 32247", "accession": "GCA_900104805.1", "taxid": 1392877, "species_taxid": 1392877, "relation_to_type": "type", "validated": true, "ani": 82.9861, "matched_fragments": 692, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas sagittaria", "strain": "strain=JCM 18195", "accession": "GCA_900115715.1", "taxid": 1135990, "species_taxid": 1135990, "relation_to_type": "type", "validated": true, "ani": 82.9499, "matched_fragments": 675, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aromaticivorans", "strain": "strain=MAP12", "accession": "GCA_019097855.1", "taxid": 2849492, "species_taxid": 2849492, "relation_to_type": "type", "validated": true, "ani": 82.5296, "matched_fragments": 665, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas delhiensis", "strain": "strain=CCM 7361", "accession": "GCA_900099945.1", "taxid": 366289, "species_taxid": 366289, "relation_to_type": "type", "validated": true, "ani": 82.5002, "matched_fragments": 793, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas citronellolis", "strain": "strain=LMG 18378", "accession": "GCA_900112375.1", "taxid": 53408, "species_taxid": 53408, "relation_to_type": "type", "validated": true, "ani": 82.498, "matched_fragments": 758, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas citronellolis", "strain": "strain=NBRC 103043", "accession": "GCA_002091555.1", "taxid": 53408, "species_taxid": 53408, "relation_to_type": "type", "validated": true, "ani": 82.4525, "matched_fragments": 777, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 82.3009, "matched_fragments": 722, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azotobacter chroococcum", "strain": "strain=ATCC 9043", "accession": "GCA_004327905.1", "taxid": 353, "species_taxid": 353, "relation_to_type": "type", "validated": true, "ani": 82.2624, "matched_fragments": 657, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azotobacter chroococcum", "strain": "strain=DSM 2286", "accession": "GCA_004339665.1", "taxid": 353, "species_taxid": 353, "relation_to_type": "type", "validated": true, "ani": 82.2019, "matched_fragments": 664, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azotobacter chroococcum subsp. isscasi", "strain": "strain=P205", "accession": "GCA_004327895.1", "taxid": 2528971, "species_taxid": 353, "relation_to_type": "type", "validated": true, "ani": 82.1999, "matched_fragments": 666, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azotobacter beijerinckii", "strain": "strain=DSM 378", "accession": "GCA_900110885.1", "taxid": 170623, "species_taxid": 170623, "relation_to_type": "type", "validated": true, "ani": 82.1014, "matched_fragments": 619, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas mangiferae", "strain": "strain=DMKU BBB3-04", "accession": "GCA_007109405.1", "taxid": 2593654, "species_taxid": 2593654, "relation_to_type": "type", "validated": true, "ani": 81.7805, "matched_fragments": 652, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas furukawaii", "strain": "strain=KF707", "accession": "GCA_000262065.3", "taxid": 1149133, "species_taxid": 1149133, "relation_to_type": "type", "validated": true, "ani": 81.7125, "matched_fragments": 710, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 81.5433, "matched_fragments": 732, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 81.5213, "matched_fragments": 705, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 81.451, "matched_fragments": 692, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas indica", "strain": "strain=NBRC 103045", "accession": "GCA_002091635.1", "taxid": 137658, "species_taxid": 137658, "relation_to_type": "type", "validated": true, "ani": 81.4119, "matched_fragments": 740, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=CGMCC 1.1803", "accession": "GCA_000219605.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 81.3551, "matched_fragments": 684, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=FDAARGOS_875", "accession": "GCA_016028655.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 81.3404, "matched_fragments": 691, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas eucalypticola", "strain": "strain=NP-1", "accession": "GCA_013374995.1", "taxid": 2599595, "species_taxid": 2599595, "relation_to_type": "type", "validated": true, "ani": 79.9204, "matched_fragments": 576, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuritortus calidifontis", "strain": "strain=DSM 103923", "accession": "GCA_004346085.1", "taxid": 1914471, "species_taxid": 1914471, "relation_to_type": "type", "validated": true, "ani": 76.9481, "matched_fragments": 174, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuritortus calidifontis", "strain": "strain=J1A", "accession": "GCA_003967275.1", "taxid": 1914471, "species_taxid": 1914471, "relation_to_type": "type", "validated": true, "ani": 76.8628, "matched_fragments": 175, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=CCUG 39790", "accession": "GCA_008801975.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.4856, "matched_fragments": 214, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=DSM 12141", "accession": "GCA_014203015.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.443, "matched_fragments": 226, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000802425.1", "gtdb_species": "s__Pseudomonas_H flexibilis", "ani": 100.0, "matched_fragments": 1227, "total_fragments": 1229, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_H", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.07", "min_intra_species_ani": "98.74", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.90", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCF_900104805.1", "gtdb_species": "s__Pseudomonas_K oryzae", "ani": 82.9803, "matched_fragments": 691, 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