{
    "type": "genome",
    "identifier": "GCF_000815225.1",
    "organism": "Allofrancisella guangzhouensis",
    "title": "Allofrancisella guangzhouensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Swedish Defense Research Agancy",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000815225.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN03273550",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "594679",
        "species_taxid": "594679",
        "organism_name": "Allofrancisella guangzhouensis",
        "infraspecific_name": "strain=08HL01032",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/01/06",
        "asm_name": "ASM81522v1",
        "asm_submitter": "Swedish Defense Research Agancy",
        "gbrs_paired_asm": "GCA_000815225.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/815/225/GCF_000815225.1_ASM81522v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "1661527",
        "genome_size_ungapped": "1661527",
        "gc_percent": "32.000000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000815225.1-RS_2024_12_09",
        "annotation_date": "2024-12-09",
        "total_gene_count": "1572",
        "protein_coding_gene_count": "1506",
        "non_coding_gene_count": "52",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-01-06",
    "dateModified": "2015-01-06",
    "datePublished": "2015-01-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Allofrancisella guangzhouensis"
        ],
        "sample_taxid": [
            "594679"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Guangzhou city"
        ],
        "sample_host_location_id": [],
        "data_size": "0.460 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 2.08,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "1661527",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "1658482",
        "N50 (bp)": "1658482",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "32.0",
        "Number of CDSs": "1520",
        "Average Protein Length": "327.0",
        "Coding Ratio (%)": "89.7",
        "Number of rRNAs": "10",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_000815225.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 552,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
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                "species_taxid": 1085644,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Allofrancisella inopinata",
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                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Allofrancisella inopinata",
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                "accession": "GCA_004365555.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_001895265.1",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Francisella noatunensis subsp. noatunensis",
                "strain": "strain=2005/50/F292-6",
                "accession": "GCA_009823375.1",
                "taxid": 360196,
                "species_taxid": 657445,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Francisella philomiragia",
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                "accession": "GCA_000833455.1",
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                "species_taxid": 28110,
                "relation_to_type": "type",
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            },
            {
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                "accession": "GCA_001608445.1",
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        "gtdb_result": [
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                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.90",
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            {
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                "mean_intra_species_ani": "98.33",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_012222965.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Francisellales;f__Francisellaceae;g__Allofrancisella",
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                "mean_intra_species_ani": "N/A",
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    },
    "_bac2feature": {
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}