{
    "type": "genome",
    "identifier": "GCF_000817955.1",
    "organism": "Geobacter pickeringii",
    "title": "Geobacter pickeringii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Minnesota",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000817955.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN03096815",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "345632",
        "species_taxid": "345632",
        "organism_name": "Geobacter pickeringii",
        "infraspecific_name": "strain=G13",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/01/14",
        "asm_name": "ASM81795v1",
        "asm_submitter": "University of Minnesota",
        "gbrs_paired_asm": "GCA_000817955.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/817/955/GCF_000817955.1_ASM81795v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3618700",
        "genome_size_ungapped": "3618700",
        "gc_percent": "62.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000817955.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "3388",
        "protein_coding_gene_count": "3288",
        "non_coding_gene_count": "65",
        "pubmed_id": "25744992"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-01-14",
    "dateModified": "2015-01-14",
    "datePublished": "2015-01-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Geobacter pickeringii"
        ],
        "sample_taxid": [
            "345632"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Tabernacle Church, Georgia"
        ],
        "sample_host_location_id": [],
        "data_size": "1.006 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 90.77,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3618700",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3618700",
        "N50 (bp)": "3618700",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.3",
        "Number of CDSs": "3349",
        "Average Protein Length": "324.7",
        "Coding Ratio (%)": "90.2",
        "Number of rRNAs": "9",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Geobacter pickeringii",
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                "accession": "GCA_000817955.1",
                "taxid": 345632,
                "species_taxid": 345632,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 1203,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Geobacter grbiciae",
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                "accession": "GCA_018531165.1",
                "taxid": 155042,
                "species_taxid": 155042,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 644,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geobacter hydrogenophilus",
                "strain": "strain=DSM 13691",
                "accession": "GCA_018501225.1",
                "taxid": 40983,
                "species_taxid": 40983,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.1827,
                "matched_fragments": 646,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geobacter metallireducens",
                "strain": "strain=GS-15",
                "accession": "GCA_000012925.1",
                "taxid": 28232,
                "species_taxid": 28232,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.1552,
                "matched_fragments": 663,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geobacter soli",
                "strain": "strain=GSS01",
                "accession": "GCA_000816575.1",
                "taxid": 1510391,
                "species_taxid": 1510391,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6364,
                "matched_fragments": 573,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geobacter benzoatilyticus",
                "strain": "strain=Jerry-YX",
                "accession": "GCA_017338855.1",
                "taxid": 2815309,
                "species_taxid": 2815309,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6071,
                "matched_fragments": 513,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geobacter sulfurreducens",
                "strain": "strain=PCA",
                "accession": "GCA_000007985.2",
                "taxid": 35554,
                "species_taxid": 35554,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.2882,
                "matched_fragments": 552,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Capillimicrobium parvum",
                "strain": "strain=0166_1",
                "accession": "GCA_021172045.1",
                "taxid": 2884022,
                "species_taxid": 2884022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2655,
                "matched_fragments": 59,
                "total_fragments": 1206,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 90.77,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_000817955.1",
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                "matched_fragments": 1201,
                "total_fragments": 1206,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__Geobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_011046855.1",
                "gtdb_species": "s__Geobacter metallireducens_A",
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__Geobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_018501225.1",
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                "ani": 82.1825,
                "matched_fragments": 646,
                "total_fragments": 1206,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__Geobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_000012925.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__Geobacter",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_003712145.1",
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                "accession": "GCA_905339345.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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                "accession": "GCF_000007985.2",
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            },
            {
                "accession": "GCA_003246035.1",
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            },
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                "accession": "GCA_002841765.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.305,
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    "_genome_taxon": [
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}