{ "type": "genome", "identifier": "GCF_000819845.1", "organism": "Aeromonas enteropelogenes", "title": "Aeromonas enteropelogenes", "description": "na", "data type": "Genome sequencing and assembly", "organization": "UCONNMISEQ", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000819845.1", "bioproject": "PRJNA224116", "biosample": "SAMEA2752420", "wgs_master": "CDCG00000000.1", "refseq_category": "na", "taxid": "29489", "species_taxid": "29489", "organism_name": "Aeromonas enteropelogenes", "infraspecific_name": "strain=CECT 4487", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/12/01", "asm_name": "PRJEB7028", "asm_submitter": "UCONNMISEQ", "gbrs_paired_asm": "GCA_000819845.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/819/845/GCF_000819845.1_PRJEB7028", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4474738", "genome_size_ungapped": "4461928", "gc_percent": "59.500000", "replicon_count": "0", "scaffold_count": "46", "contig_count": "46", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-01-25", "total_gene_count": "4200", "protein_coding_gene_count": "4050", "non_coding_gene_count": "95", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-12-01", "dateModified": "2014-12-01", "datePublished": "2014-12-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Aeromonas enteropelogenes" ], "sample_taxid": [ "29489" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": 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"organism_name": "Pseudomonas aeruginosa", "strain": "strain=JCM 5962", "accession": "GCA_022496575.1", "taxid": 287, "species_taxid": 287, "relation_to_type": "type", "validated": true, "ani": 76.4848, "matched_fragments": 160, "total_fragments": 1470, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aeruginosa", "strain": "strain=DSM 50071", "accession": "GCA_024169805.1", "taxid": 287, "species_taxid": 287, "relation_to_type": "type", "validated": true, "ani": 76.4605, "matched_fragments": 162, "total_fragments": 1470, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas capeferrum", "strain": "strain=WCS358", "accession": "GCA_022548835.1", "taxid": 1495066, "species_taxid": 1495066, "relation_to_type": "type", "validated": true, "ani": 76.3532, "matched_fragments": 121, "total_fragments": 1470, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, 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86.8835, "matched_fragments": 1039, "total_fragments": 1470, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Aeromonadaceae;g__Aeromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.21", "min_intra_species_ani": "98.21", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000819785.1", "gtdb_species": "s__Aeromonas caviae", "ani": 86.5811, "matched_fragments": 1073, "total_fragments": 1470, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Aeromonadaceae;g__Aeromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.93", "min_intra_species_ani": "97.49", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.83", "num_clustered_genomes": 112, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.127, "cell_length": 0.301, "doubling_h": 0.231, 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