{ "type": "genome", "identifier": "GCF_000821245.2", "organism": "Virgibacillus senegalensis", "title": "Virgibacillus senegalensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000821245.2", "bioproject": "PRJNA224116", "biosample": "SAMEA2785595", "wgs_master": "CCXU00000000.1", "refseq_category": "reference genome", "taxid": "1499679", "species_taxid": "1499679", "organism_name": "Virgibacillus senegalensis", "infraspecific_name": "strain=SK-1", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/09/29", "asm_name": "ASM82124v2", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_000821245.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/821/245/GCF_000821245.2_ASM82124v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3924902", "genome_size_ungapped": "3875932", "gc_percent": "43.000000", "replicon_count": "0", "scaffold_count": "9", "contig_count": "59", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000821245.2-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3927", "protein_coding_gene_count": "3724", "non_coding_gene_count": "95", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-09-29", "dateModified": "2014-09-29", "datePublished": "2014-09-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Virgibacillus senegalensis" ], "sample_taxid": [ "1499679" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"s__Sediminibacillus terrae", "ani": 82.0277, "matched_fragments": 812, "total_fragments": 1304, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_D;f__Amphibacillaceae;g__Sediminibacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.15", "min_intra_species_ani": "99.14", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900103695.1", "gtdb_species": "s__Sediminibacillus halophilus", "ani": 81.875, "matched_fragments": 846, "total_fragments": 1304, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_D;f__Amphibacillaceae;g__Sediminibacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900101125.1", "gtdb_species": "s__Sediminibacillus albus", "ani": 78.6958, 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