{ "type": "genome", "identifier": "GCF_000826105.1", "organism": "Pseudomonas massiliensis", "title": "Pseudomonas massiliensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000826105.1", "bioproject": "PRJNA224116", "biosample": "SAMEA2821758", "wgs_master": "CCYK00000000.1", "refseq_category": "reference genome", "taxid": "522492", "species_taxid": "522492", "organism_name": "Pseudomonas massiliensis", "infraspecific_name": "strain=CB1", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/10/18", "asm_name": "Pseudomonas massiliensis CB1", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_000826105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/826/105/GCF_000826105.1_Pseudomonas_massiliensis_CB1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4723534", "genome_size_ungapped": "4723534", "gc_percent": "62.500000", "replicon_count": "0", "scaffold_count": "7", "contig_count": "7", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000826105.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "4332", "protein_coding_gene_count": "4153", "non_coding_gene_count": "78", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-10-18", "dateModified": "2014-10-18", "datePublished": "2014-10-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas massiliensis" ], "sample_taxid": [ "522492" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], 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"status": "conclusive" }, { "organism_name": "Pseudomonas quercus", "strain": "strain=hsmgli-8", "accession": "GCA_012033695.1", "taxid": 2722792, "species_taxid": 2722792, "relation_to_type": "type", "validated": true, "ani": 80.9326, "matched_fragments": 786, "total_fragments": 1570, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas japonica", "strain": "strain=NBRC 103040", "accession": "GCA_000730585.1", "taxid": 256466, "species_taxid": 256466, "relation_to_type": "type", "validated": true, "ani": 80.4061, "matched_fragments": 665, "total_fragments": 1570, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas xantholysinigenes", "strain": "strain=RW9S1A", "accession": "GCA_014268885.2", "taxid": 2745490, "species_taxid": 2745490, "relation_to_type": "type", "validated": true, "ani": 80.3889, "matched_fragments": 681, "total_fragments": 1570, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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