{ "type": "genome", "identifier": "GCF_000829515.1", "organism": "Jeotgalibacillus campisalis", "title": "Jeotgalibacillus campisalis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Universiti Teknologi Malaysia", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000829515.1", "bioproject": "PRJNA224116", "biosample": "SAMN03009544", "wgs_master": "JXRR00000000.1", "refseq_category": "reference genome", "taxid": "220754", "species_taxid": "220754", "organism_name": "Jeotgalibacillus campisalis", "infraspecific_name": "strain=SF-57", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/01/27", "asm_name": "ASM82951v1", "asm_submitter": "Universiti Teknologi Malaysia", "gbrs_paired_asm": "GCA_000829515.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/829/515/GCF_000829515.1_ASM82951v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3650490", "genome_size_ungapped": "3650490", "gc_percent": "41.000000", "replicon_count": "0", "scaffold_count": "24", "contig_count": "24", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000829515.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "3636", "protein_coding_gene_count": "3529", "non_coding_gene_count": "80", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-01-27", "dateModified": "2015-01-27", "datePublished": "2015-01-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Jeotgalibacillus campisalis" ], "sample_taxid": [ "220754" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "1.037 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3650490", "Number of Sequences": "24", "Longest Sequences (bp)": "777859", "N50 (bp)": "510690", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "41.1", "Number of CDSs": "3592", "Average Protein Length": "289.6", "Coding Ratio (%)": "85.5", "Number of rRNAs": "5", "Number of tRNAs": "69", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Jeotgalibacillus campisalis", "strain": "strain=SF-57", "accession": "GCA_000829515.1", "taxid": 220754, "species_taxid": 220754, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1204, 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"min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_004358665.1", "gtdb_species": "s__Jeotgalibacillus sp004358665", "ani": 79.1288, "matched_fragments": 389, "total_fragments": 1205, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Jeotgalibacillaceae;g__Jeotgalibacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002926065.1", "gtdb_species": "s__Jeotgalibacillus proteolyticus", "ani": 78.7213, "matched_fragments": 404, "total_fragments": 1205, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Jeotgalibacillaceae;g__Jeotgalibacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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