{
    "type": "genome",
    "identifier": "GCF_000831385.1",
    "organism": "Nonlabens marinus S1-08",
    "title": "Nonlabens marinus S1-08",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Atmosphere and Ocean Research Institute, Univ. Tokyo",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000831385.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00061027",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "1454201",
        "species_taxid": "930802",
        "organism_name": "Nonlabens marinus S1-08",
        "infraspecific_name": "strain=S1-08",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Chromosome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/03/17",
        "asm_name": "ASM83138v1",
        "asm_submitter": "Atmosphere and Ocean Research Institute, Univ. Tokyo",
        "gbrs_paired_asm": "GCA_000831385.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/831/385/GCF_000831385.1_ASM83138v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2915920",
        "genome_size_ungapped": "2906046",
        "gc_percent": "39.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000831385.1-RS_2024_10_22",
        "annotation_date": "2024-10-22",
        "total_gene_count": "2704",
        "protein_coding_gene_count": "2652",
        "non_coding_gene_count": "46",
        "pubmed_id": "24706784"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-03-17",
    "dateModified": "2014-03-17",
    "datePublished": "2014-03-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Nonlabens marinus S1-08"
        ],
        "sample_taxid": [
            "1454201"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.824 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2915920",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2915920",
        "N50 (bp)": "2915920",
        "Gap Ratio (%)": "0.338624",
        "GCcontent (%)": "39.7",
        "Number of CDSs": "2624",
        "Average Protein Length": "333.5",
        "Coding Ratio (%)": "90.0",
        "Number of rRNAs": "6",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Nonlabens marinus",
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                "accession": "GCA_000831385.1",
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                "species_taxid": 930802,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 967,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Nonlabens agnitus",
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                "accession": "GCA_002994045.1",
                "taxid": 870484,
                "species_taxid": 870484,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.031,
                "matched_fragments": 406,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens antarcticus",
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                "accession": "GCA_015356755.1",
                "taxid": 392714,
                "species_taxid": 392714,
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                "ani": 78.7926,
                "matched_fragments": 408,
                "total_fragments": 971,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens ponticola",
                "strain": "strain=MJ115",
                "accession": "GCA_003966335.1",
                "taxid": 2496866,
                "species_taxid": 2496866,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4053,
                "matched_fragments": 245,
                "total_fragments": 971,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens tegetincola",
                "strain": "strain=JCM 12886",
                "accession": "GCA_002954355.1",
                "taxid": 323273,
                "species_taxid": 323273,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.27,
                "matched_fragments": 108,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens dokdonensis",
                "strain": "strain=DSW-6",
                "accession": "GCA_000332115.1",
                "taxid": 328515,
                "species_taxid": 328515,
                "relation_to_type": "type",
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                "ani": 78.1856,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens dokdonensis",
                "strain": "strain=DSM 17205",
                "accession": "GCA_003254015.1",
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                "species_taxid": 328515,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1286,
                "matched_fragments": 180,
                "total_fragments": 971,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens arenilitoris",
                "strain": "strain=KCTC 32109",
                "accession": "GCA_002954765.1",
                "taxid": 1217969,
                "species_taxid": 1217969,
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                "validated": true,
                "ani": 78.1217,
                "matched_fragments": 162,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonlabens xiamenensis",
                "strain": "strain=1Q3",
                "accession": "GCA_003865345.1",
                "taxid": 2341043,
                "species_taxid": 2341043,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6781,
                "matched_fragments": 116,
                "total_fragments": 971,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_000831385.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Nonlabens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_002994045.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_001413925.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
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                "accession": "GCF_900101765.1",
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                "mean_intra_species_ani": "N/A",
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            {
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            },
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "marinus",
        "S1-08"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}