{ "type": "genome", "identifier": "GCF_000931655.1", "organism": "Acinetobacter brisouii CIP 110357", "title": "Acinetobacter brisouii CIP 110357", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000931655.1", "bioproject": "PRJNA224116", "biosample": "SAMD00019874", "wgs_master": "BBTI00000000.1", "refseq_category": "na", "taxid": "1341683", "species_taxid": "396323", "organism_name": "Acinetobacter brisouii CIP 110357", "infraspecific_name": "strain=DSM 18516", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/02/17", "asm_name": "ASM93165v1", "asm_submitter": "National Institute of Technology and Evaluation", "gbrs_paired_asm": "GCA_000931655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/931/655/GCF_000931655.1_ASM93165v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3089410", "genome_size_ungapped": "3089410", "gc_percent": "41.500000", "replicon_count": "0", "scaffold_count": "41", "contig_count": "41", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000931655.1-RS_2024_08_19", "annotation_date": "2024-08-19", "total_gene_count": "2982", "protein_coding_gene_count": "2860", "non_coding_gene_count": "67", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-02-17", "dateModified": "2015-02-17", "datePublished": "2015-02-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Acinetobacter brisouii CIP 110357" ], "sample_taxid": [ "1341683" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Korea" ], "sample_host_location_id": [], "data_size": "0.877 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3089410", "Number of Sequences": "41", "Longest Sequences (bp)": "521846", "N50 (bp)": "254752", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "41.6", "Number of CDSs": "2891", "Average Protein Length": "305.8", "Coding Ratio (%)": "85.9", "Number of rRNAs": "3", "Number of tRNAs": "61", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter brisouii", "strain": "strain=DSM 18516", "accession": "GCA_000931655.1", "taxid": 396323, "species_taxid": 396323, 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79.4018, "matched_fragments": 304, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tjernbergiae", "strain": "strain=DSM 14971", "accession": "GCA_000374425.1", "taxid": 202955, "species_taxid": 202955, "relation_to_type": "type", "validated": true, "ani": 79.3871, "matched_fragments": 307, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tjernbergiae", "strain": "strain=DSM 14971", "accession": "GCA_000759995.1", "taxid": 202955, "species_taxid": 202955, "relation_to_type": "type", "validated": true, "ani": 79.3753, "matched_fragments": 302, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tandoii", "strain": "strain=CIP 107469", "accession": "GCA_000400735.1", "taxid": 202954, "species_taxid": 202954, "relation_to_type": "type", "validated": true, "ani": 79.3247, "matched_fragments": 371, 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"below_threshold" }, { "organism_name": "Acinetobacter baumannii", "strain": "strain=PartI-Abaumannii-RM8376", "accession": "GCA_022870045.1", "taxid": 470, "species_taxid": 470, "relation_to_type": "type", "validated": true, "ani": 79.2738, "matched_fragments": 319, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tandoii", "strain": "strain=DSM 14970", "accession": "GCA_000621065.1", "taxid": 202954, "species_taxid": 202954, "relation_to_type": "type", "validated": true, "ani": 79.2194, "matched_fragments": 364, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter vivianii", "strain": "strain=CCM 8642", "accession": "GCA_014635885.1", "taxid": 1776742, "species_taxid": 1776742, "relation_to_type": "type", "validated": true, "ani": 79.1881, "matched_fragments": 317, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"accession": "GCA_000368685.1", "taxid": 202950, "species_taxid": 202950, "relation_to_type": "type", "validated": true, "ani": 79.0228, "matched_fragments": 299, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter johnsonii", "strain": "strain=NCTC10308", "accession": "GCA_900444855.1", "taxid": 40214, "species_taxid": 40214, "relation_to_type": "suspected-type", "validated": true, "ani": 78.8108, "matched_fragments": 332, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter courvalinii", "strain": "strain=CCUG 67960", "accession": "GCA_008802255.1", "taxid": 280147, "species_taxid": 280147, "relation_to_type": "type", "validated": true, "ani": 78.7889, "matched_fragments": 326, "total_fragments": 1011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter silvestris", "strain": "strain=ANC 4999", "accession": "GCA_002135235.1", "taxid": 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