{ "type": "genome", "identifier": "GCF_000952155.1", "organism": "Aliterella atlantica CENA595", "title": "Aliterella atlantica CENA595", "description": "na", "data type": "Genome sequencing and assembly", "organization": "UNESP-FCAV", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000952155.1", "bioproject": "PRJNA224116", "biosample": "SAMN03354289", "wgs_master": "JYON00000000.1", "refseq_category": "reference genome", "taxid": "1618023", "species_taxid": "1827278", "organism_name": "Aliterella atlantica CENA595", "infraspecific_name": "strain=CENA595", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/03/13", "asm_name": "asmbly001", "asm_submitter": "UNESP-FCAV", "gbrs_paired_asm": "GCA_000952155.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/952/155/GCF_000952155.1_asmbly001", "excluded_from_refseq": "na", 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continental shelf of Atlantic Ocean's Brazilian shore" ], "sample_host_location_id": [], "data_size": "1.493 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5265703", "Number of Sequences": "60", "Longest Sequences (bp)": "518663", "N50 (bp)": "156240", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "42.6", "Number of CDSs": "4810", "Average Protein Length": "309.8", "Coding Ratio (%)": "84.9", "Number of rRNAs": "2", "Number of tRNAs": "60", "Number of CRISPRs": "4" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aliterella atlantica", "strain": "strain=CENA595", "accession": "GCA_000952155.1", "taxid": 1827278, "species_taxid": 1827278, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 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"below_threshold" }, { "organism_name": "Chlorogloeopsis fritschii", "strain": "strain=PCC 6912", "accession": "GCA_000317285.1", "taxid": 1124, "species_taxid": 1124, "relation_to_type": "type", "validated": true, "ani": 76.0716, "matched_fragments": 165, "total_fragments": 1723, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fischerella thermalis", "strain": "strain=PCC 7521", "accession": "GCA_000317225.1", "taxid": 372787, "species_taxid": 372787, "relation_to_type": "type", "validated": true, "ani": 76.0, "matched_fragments": 112, "total_fragments": 1723, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chlorogloeopsis fritschii", "strain": "strain=PCC 6912", "accession": "GCA_003990575.1", "taxid": 1124, "species_taxid": 1124, "relation_to_type": "type", "validated": true, "ani": 75.9708, "matched_fragments": 170, "total_fragments": 1723, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Argonema galeatum", "strain": "strain=A003/A1", "accession": "GCA_023333595.1", "taxid": 2942762, "species_taxid": 2942762, "relation_to_type": "type", "validated": true, "ani": 75.8835, "matched_fragments": 106, "total_fragments": 1723, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Argonema antarcticum", "strain": "strain=A004/B2", "accession": "GCA_023333585.1", "taxid": 2942763, "species_taxid": 2942763, "relation_to_type": "type", "validated": true, "ani": 75.7781, "matched_fragments": 123, "total_fragments": 1723, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Okeania hirsuta", "strain": "strain=PAB10Feb10-1", "accession": "GCA_003838195.1", "taxid": 1458930, "species_taxid": 1458930, "relation_to_type": "type", "validated": true, "ani": 75.1552, "matched_fragments": 61, "total_fragments": 1723, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, 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