# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00050	sequence1:4756..5004(+)	partial			WP_010907457.1	DUF721 family protein	100.0	43.4	87.8
MGA_8	LOCUS_00080	sequence1:11763..12062(+)	partial			WP_010907460.1	DUF3566 domain-containing protein	100.0	32.7	93.9
MGA_30	LOCUS_00300	sequence1:46885..47961(+)	partial			WP_010907492.1	type VII secretion protein EccB	100.0	74.4	88.8
MGA_33	LOCUS_00330	sequence1:52440..52649(+)	frameshift		52562,52414	WP_010907489.1	PPE domain-containing protein	59.4	13.9	71.4
MGA_34	LOCUS_00340	sequence1:52597..53205(+)	frameshift		52562,53100,52414,53127	WP_010907489.1	PPE domain-containing protein	90.6	61.3	71.9
MGA_37	LOCUS_00370	sequence1:55076..55813(+)	partial			WP_010907486.1	MinD/ParA family protein	97.6	40.8	88.7
MGA_51	LOCUS_00510	sequence1:81348..81611(-)	frameshift,internal_stop_codon	81082..81084(-),81306..81308(-),81348..81350(-)	81585,81137,81224,81161,81133	WP_010907497.1	TetR/AcrR family transcriptional regulator	89.7	37.4	80.0
MGA_63	LOCUS_00630	sequence1:92238..92558(-)	frameshift,internal_stop_codon	92237..92239(-),92054..92056(-),92156..92158(-)	92693,92557	WP_235624060.1	LCP family protein	98.1	24.3	67.3
MGA_64	LOCUS_00640	sequence1:92658..92966(-)	frameshift		92693,92557	WP_235624060.1	LCP family protein	75.5	18.2	55.1
MGA_65	LOCUS_00650	sequence1:93177..93446(-)	frameshift,internal_stop_codon	93175..93177(-),93337..93339(-)	93300,93588,93434,93483,93355	WP_003420910.1	DUF2470 domain-containing protein	94.4	32.2	54.8
MGA_69	LOCUS_00690	sequence1:95734..96042(-)	frameshift,internal_stop_codon	95754..95756(-)	96065,95852	WP_003899719.1	metallopeptidase family protein	61.8	46.0	63.5
MGA_72	LOCUS_00720	sequence1:99463..99645(+)	frameshift,internal_stop_codon	99259..99261(+),99265..99267(+),99374..99376(+),99383..99385(+),99428..99430(+),99232..99234(+)	99409,99604,99327	WP_015777030.1	SDR family oxidoreductase	78.3	18.1	57.4
MGA_75	LOCUS_00750	sequence1:103999..104244(+)	partial			WP_003897817.1	lysophospholipid acyltransferase family protein	76.5	23.7	53.2
MGA_78	LOCUS_00780	sequence1:106257..106493(-)	frameshift,internal_stop_codon	106513..106515(-),106223..106225(-),106688..106690(-)	106082,106629,106182,106256,106449,106587,106684,106461,106207	WP_003420805.1	LGFP repeat-containing protein	100.0	14.5	67.9
MGA_94	LOCUS_00940	sequence1:133153..133398(-)	internal_stop_codon	133426..133428(-)		WP_003895417.1	lactate 2-monooxygenase	100.0	20.8	43.4
MGA_113	LOCUS_01130	sequence1:161625..161918(-)	frameshift,internal_stop_codon	161979..161981(-),161958..161960(-)	162152,162081,162085,161645	WP_003420576.1	histidinol-phosphate transaminase	96.9	26.6	60.6
MGA_128	LOCUS_01280	sequence1:189901..190872(-)	partial			WP_010907557.1	fatty-acid--AMP ligase FAAL28/FadD28	100.0	55.8	90.4
MGA_130	LOCUS_01300	sequence1:199462..199617(+)	frameshift,internal_stop_codon	199615..199617(+)	199384,199418,199275	WP_003900834.1	wax ester/triacylglycerol synthase family O-acyltransferase	100.0	10.9	51.0
MGA_140	LOCUS_01400	sequence1:207407..208177(-)	frameshift,internal_stop_codon	207448..207450(-)	207362,207340,207420,207487	WP_054878839.1	cation diffusion facilitator family transporter	89.8	76.9	77.0
MGA_141	LOCUS_01410	sequence1:208542..208838(-)	frameshift,internal_stop_codon	208426..208428(-),208909..208911(-),208540..208542(-),208513..208515(-)	208353,208674,208966,208455,208329,208619,208301,208591,208848,208923	WP_003898413.1	site-2 protease family protein	59.2	20.1	53.4
MGA_148	LOCUS_01480	sequence1:218022..218633(-)	frameshift		218027	WP_010907640.1	MBL fold metallo-hydrolase	99.5	80.5	89.1
MGA_150	LOCUS_01500	sequence1:220377..220589(+)	frameshift,internal_stop_codon	220589..220591(+),220828..220830(+)	220739,220228,220421,220715,220437,220183,220633,220285	WP_003402089.1	phosphate acetyltransferase	70.0	7.1	69.4
MGA_152	LOCUS_01520	sequence1:220867..221079(+)	frameshift,internal_stop_codon	221128..221130(+),221077..221079(+),221125..221127(+)	221338,221247	WP_005085778.1	acetate kinase	100.0	18.8	45.7
MGA_168	LOCUS_01680	sequence1:238910..239119(+)	frameshift,internal_stop_codon	239117..239119(+)	239272	WP_010950597.1	PE family protein	94.2	10.4	60.0
MGA_170	LOCUS_01700	sequence1:239951..240196(+)	frameshift		239888,239946,240157	WP_003404828.1	Fpg/Nei family DNA glycosylase	91.4	49.4	75.6
MGA_174	LOCUS_01740	sequence1:243088..243360(-)	partial			WP_010907562.1	chorismate mutase	86.7	74.3	92.3
MGA_183	LOCUS_01830	sequence1:257281..257568(+)	partial			WP_208267418.1	adenylate/guanylate cyclase domain-containing protein	85.3	14.4	50.6
MGA_187	LOCUS_01870	sequence1:259491..259658(+)	frameshift,internal_stop_codon	259331..259333(+),259950..259952(+),259319..259321(+)	259315,259653,259366,259496,259850,259693,259727	WP_003404949.1	enoyl-CoA hydratase family protein	72.7	14.9	62.5
MGA_189	LOCUS_01890	sequence1:260848..261045(+)	frameshift,internal_stop_codon	261062..261064(+)	261042	WP_010950472.1	hypothetical protein	92.3	43.2	51.7
MGA_191	LOCUS_01910	sequence1:263112..263378(+)	frameshift,internal_stop_codon	262903..262905(+),262879..262881(+)	263010,263131	WP_003898662.1	LppA family lipoprotein	89.8	35.7	43.8
MGA_192	LOCUS_01920	sequence1:263587..263787(-)	frameshift,internal_stop_codon	263872..263874(-)	263829,263775	WP_005082906.1	DUF1446 domain-containing protein	90.9	11.0	51.7
MGA_207	LOCUS_02070	sequence1:277717..277944(+)	frameshift		277665,277765	WP_165443159.1	DUF5642 family protein	41.3	40.8	83.9
MGA_209	LOCUS_02090	sequence1:280227..280463(+)	frameshift,internal_stop_codon	280461..280463(+),280160..280162(+),279958..279960(+)	280276,280478,279999	WP_003405169.1	arginine deiminase	74.4	14.4	55.2
MGA_213	LOCUS_02130	sequence1:285424..285591(-)	frameshift,internal_stop_codon	285610..285612(-),285205..285207(-),285278..285280(-),285160..285162(-)	285265,285429,285374	WP_003419657.1	DUF5628 domain-containing protein	90.9	14.5	70.0
MGA_215	LOCUS_02150	sequence1:287558..287737(-)	frameshift,internal_stop_codon	287337..287339(-),287358..287360(-),287511..287513(-)	287369,287563,287435,287339,287855,287550,287985,287795,287895,287870	WP_003419652.1	DEAD/DEAH box helicase	81.4	7.8	61.7
MGA_238	LOCUS_02380	sequence1:315542..315736(-)	frameshift,internal_stop_codon	315395..315397(-)	315361,315470,315358,315758	WP_003899601.1	LLM class flavin-dependent oxidoreductase	81.2	13.2	75.0
MGA_265	LOCUS_02650	sequence1:347856..348023(-)	frameshift		348040	WP_003896825.1	arsenate reductase (glutaredoxin)	100.0	47.8	70.9
MGA_268	LOCUS_02680	sequence1:351272..351742(+)	frameshift		351263	WP_003405271.1	TetR/AcrR family transcriptional regulator	100.0	79.2	79.5
MGA_270	LOCUS_02700	sequence1:357912..358115(+)	frameshift,internal_stop_codon	358174..358176(+),357664..357666(+),358168..358170(+),358096..358098(+)	357696,357648,357748,358071,357944	WP_003405288.1	lytic murein transglycosylase	64.2	17.7	79.1
MGA_276	LOCUS_02760	sequence1:363235..363444(+)	frameshift,internal_stop_codon	363147..363149(+),363479..363481(+),363443..363445(+),363512..363514(+),363558..363560(+),363449..363451(+),362981..362983(+)	363167,363234,363110,363463,363532,363581,363007	WP_010908861.1	RND family transporter	97.1	7.0	50.7
MGA_277	LOCUS_02770	sequence1:365735..365908(-)	frameshift,internal_stop_codon	365942..365944(-),365714..365716(-)	365689,365526,365481,365755,365629	WP_003405328.1	two-component system response regulator TrcR	86.0	20.6	66.0
MGA_279	LOCUS_02790	sequence1:370729..370923(+)	frameshift,internal_stop_codon	370702..370704(+)	370899,370972	WP_011729097.1	hypothetical protein	82.8	18.8	66.0
MGA_283	LOCUS_02830	sequence1:373510..373722(-)	partial			WP_010908865.1	hypothetical protein	54.3	37.6	71.1
MGA_286	LOCUS_02860	sequence1:375834..376007(-)	partial			WP_003402297.1	putative holin	98.2	70.9	62.5
MGA_289	LOCUS_02890	sequence1:376512..376898(-)	frameshift,internal_stop_codon	376908..376910(-)	376513,376802,376766,377113,377022	WP_003402294.1	aldehyde dehydrogenase family protein	97.7	24.9	49.2
MGA_291	LOCUS_02910	sequence1:378096..378347(+)	frameshift		378500,378374,378343,378057,378130,377942,378521,377982	WP_003402292.1	prolyl oligopeptidase family protein	83.1	10.3	60.9
MGA_292	LOCUS_02920	sequence1:378381..378683(+)	frameshift,internal_stop_codon	378681..378683(+)	378129,378499,378373,378342,378520,378746,378942	WP_003402292.1	prolyl oligopeptidase family protein	98.0	20.4	41.6
MGA_293	LOCUS_02930	sequence1:379205..379378(+)	frameshift,internal_stop_codon	379378..379380(+),379423..379425(+)	379443,379557,379494,379098,379179,379007	WP_003402292.1	prolyl oligopeptidase family protein	93.0	7.9	67.9
MGA_294	LOCUS_02940	sequence1:380024..380188(+)	frameshift,internal_stop_codon	379944..379946(+),379968..379970(+),379783..379785(+),379956..379958(+)	380285,380376,379928,379882,379757,380174,379821	WP_003898463.1	crotonase/enoyl-CoA hydratase family protein	92.6	16.4	64.0
MGA_299	LOCUS_02990	sequence1:385144..385593(+)	frameshift,internal_stop_codon	384954..384956(+)	385488,385265,385109,385145,385434,385293	WP_003402282.1	TetR family transcriptional regulator	94.0	60.2	57.1
MGA_302	LOCUS_03020	sequence1:386865..387083(+)	frameshift,internal_stop_codon	386777..386779(+),386801..386803(+),386717..386719(+)	386854,387334,387273,387067,387101,386815	WP_010908861.1	RND family transporter	98.6	7.2	57.7
MGA_303	LOCUS_03030	sequence1:387784..388860(+)	partial			WP_010908861.1	RND family transporter	100.0	37.3	93.9
MGA_305	LOCUS_03050	sequence1:389339..389575(+)	frameshift,internal_stop_codon	389604..389606(+),389573..389575(+),389652..389654(+),389270..389272(+)	389705,389207,389590,389223	WP_009936521.1	cytochrome c biogenesis protein DipZ	56.4	6.3	61.4
MGA_309	LOCUS_03090	sequence1:393738..393890(+)	frameshift,internal_stop_codon	393889..393891(+),394010..394012(+),393977..393979(+),394007..394009(+)	393620,393492,393942,394139,393532,393726,394063	WP_011727265.1	amidohydrolase family protein	96.0	8.3	54.2
MGA_316	LOCUS_03160	sequence1:403003..403185(-)	frameshift,internal_stop_codon	402928..402930(-)	403202,403236,403174,402791,402828,402990,402897,403029,403354	WP_010950406.1	acetate metabolism transcriptional regulator RamB	76.7	9.3	69.6
MGA_317	LOCUS_03170	sequence1:403256..403489(-)	frameshift		403026,403224,403354,402987,403182,403230	WP_003892333.1	acetate metabolism transcriptional regulator RamB	54.5	8.8	69.0
MGA_319	LOCUS_03190	sequence1:404837..405004(+)	frameshift,internal_stop_codon	405094..405096(+),405128..405130(+)	404989,405218,405059,405163,405142,404793,405114,404829	WP_003402316.1	isocitrate lyase	89.1	11.4	79.6
MGA_324	LOCUS_03240	sequence1:407259..408023(+)	frameshift		407224	WP_010908913.1	cyclopropane mycolic acid synthase PcaA	91.3	78.6	94.8
MGA_327	LOCUS_03270	sequence1:410898..411149(+)	frameshift,internal_stop_codon	411147..411149(+)	411329,411197,411399	WP_003402332.1	DUF445 domain-containing protein	92.8	16.9	62.3
MGA_328	LOCUS_03280	sequence1:411155..411346(+)	frameshift,internal_stop_codon	411147..411149(+)	411329,411399,411529,411197,411566	WP_003402332.1	DUF445 domain-containing protein	68.3	9.4	69.8
MGA_329	LOCUS_03290	sequence1:411579..411767(+)	frameshift,internal_stop_codon	411766..411768(+)	411328,411401,411573,411807	WP_011727287.1	DUF445 domain-containing protein	77.4	11.0	64.6
MGA_332	LOCUS_03320	sequence1:413706..414005(+)	partial			WP_010908909.1	DUF2599 domain-containing protein	93.9	73.2	74.2
MGA_339	LOCUS_03390	sequence1:420286..420468(-)	frameshift,internal_stop_codon	420284..420286(-)	420096,420482,420127,420458,420146,420181,420503,420030,420159	WP_003402359.1	SDR family oxidoreductase	91.7	21.9	56.4
MGA_340	LOCUS_03400	sequence1:420713..420943(+)	frameshift,internal_stop_codon	421142..421144(+)	420993,421090,421028,421012,420934,420950,421035	WP_003402361.1	transcriptional regulator	71.1	12.3	63.0
MGA_346	LOCUS_03460	sequence1:427691..428029(-)	frameshift,internal_stop_codon	427691..427693(-),428225..428227(-),427624..427626(-),428030..428032(-)	427457,428134,428103,428045,428237,427633,427539,428247	WP_010950408.1	GMC family oxidoreductase	97.3	17.3	64.2
MGA_347	LOCUS_03470	sequence1:430044..430229(+)	frameshift,internal_stop_codon	430491..430493(+),429912..429914(+)	430053,430311,429997,429966,430384,430227,429944,430010	WP_003402414.1	FadR/GntR family transcriptional regulator	83.6	21.1	74.5
MGA_371	LOCUS_03710	sequence1:452144..452326(+)	frameshift,internal_stop_codon	452420..452422(+),452381..452383(+),452324..452326(+),452360..452362(+)	452497,452531,452550,452350	WP_003900165.1	amino acid permease	100.0	13.8	70.0
MGA_383	LOCUS_03830	sequence1:463196..463441(+)	frameshift,internal_stop_codon	463439..463441(+)	463619,463565,463471	WP_003402868.1	NAD-dependent epimerase/dehydratase family protein	58.0	13.6	68.1
MGA_388	LOCUS_03880	sequence1:469996..470202(-)	frameshift		470245	WP_003405724.1	acetyl-CoA C-acetyltransferase	92.6	15.1	63.5
MGA_390	LOCUS_03900	sequence1:472174..472347(+)	frameshift,internal_stop_codon	472143..472145(+),471917..471919(+),471932..471934(+)	472096,471897,471893,472151	WP_003900268.1	alpha/beta hydrolase	100.0	19.2	61.4
MGA_392	LOCUS_03920	sequence1:473963..474652(+)	partial			WP_010908871.1	RDD family protein	72.5	66.7	91.0
MGA_398	LOCUS_03980	sequence1:481074..481259(-)	frameshift		481296,481043,481348,481076,481385	WP_003402870.1	hypothetical protein	100.0	12.8	62.3
MGA_399	LOCUS_03990	sequence1:481665..482051(-)	frameshift,internal_stop_codon	481662..481664(-),481629..481631(-),482014..482016(-)	481971,482079,482118,481607,482106,481535	WP_003402870.1	hypothetical protein	80.5	21.8	54.8
MGA_401	LOCUS_04010	sequence1:482684..482884(+)	frameshift		482842	WP_003900169.1	hypothetical protein	78.8	10.0	52.7
MGA_402	LOCUS_04020	sequence1:482859..483341(+)	frameshift,internal_stop_codon	483447..483449(+)	482842,483338	WP_003900169.1	hypothetical protein	86.9	25.2	53.5
MGA_405	LOCUS_04050	sequence1:485572..485799(+)	frameshift		485569,485896,485931,485773,485871,485906,486071,485944,485819,485981	WP_003898499.1	glycosyltransferase family 2 protein	96.0	33.0	72.2
MGA_406	LOCUS_04060	sequence1:486879..487115(+)	frameshift,internal_stop_codon	487239..487241(+)	487085	WP_010907663.1	hypothetical protein	79.5	26.5	87.1
MGA_407	LOCUS_04070	sequence1:487280..487588(+)	frameshift,internal_stop_codon	487239..487241(+)	487085,487559	WP_010907663.1	hypothetical protein	91.2	39.7	89.2
MGA_408	LOCUS_04080	sequence1:488234..488563(-)	frameshift,internal_stop_codon	488618..488620(-)	488739,487972,488839,488296,487975,488651,488268,488054	WP_003402206.1	AAA family ATPase	80.7	13.2	53.6
MGA_409	LOCUS_04090	sequence1:488825..489061(-)	frameshift,internal_stop_codon	488618..488620(-)	489089,489219,489316,488739,488851,488651	WP_003402206.1	AAA family ATPase	94.9	10.9	50.0
MGA_413	LOCUS_04130	sequence1:491748..491987(-)	frameshift,internal_stop_codon	492040..492042(-),491656..491658(-),491662..491664(-),492031..492033(-)	492112,491665,491586,491559,492024,491759	WP_003898451.1	molybdopterin molybdotransferase MoeA	96.2	18.8	64.5
MGA_420	LOCUS_04200	sequence1:497993..498304(+)	frameshift		498000	WP_172591898.1	TetR/AcrR family transcriptional regulator	97.1	53.4	86.1
MGA_423	LOCUS_04230	sequence1:501687..501929(-)	frameshift,internal_stop_codon	501424..501426(-),501686..501688(-)	501568,502119,502089,502154,502076,502135	WP_003419487.1	DNA repair protein RadA	100.0	16.9	59.8
MGA_430	LOCUS_04300	sequence1:507671..507943(+)	frameshift,internal_stop_codon	507573..507575(+),507495..507497(+)	507920,507620	WP_005085410.1	glycerophosphodiester phosphodiesterase family protein	92.2	25.0	53.0
MGA_438	LOCUS_04380	sequence1:520734..520949(+)	frameshift,internal_stop_codon	520449..520451(+),520588..520590(+)	520593,520630,521031,520472,520919	WP_003419400.1	LacI family DNA-binding transcriptional regulator	85.9	17.0	65.6
MGA_439	LOCUS_04390	sequence1:521011..521151(-)	frameshift,internal_stop_codon	521157..521159(-)	521378	WP_003419397.1	cholesterol catabolism transcriptional regulator KstR	93.5	21.1	67.4
MGA_440	LOCUS_04400	sequence1:521158..521379(-)	frameshift,internal_stop_codon	521157..521159(-)	521378	WP_014878540.1	cholesterol catabolism transcriptional regulator KstR	100.0	32.3	78.1
MGA_441	LOCUS_04410	sequence1:522622..523125(+)	frameshift,internal_stop_codon	523125..523127(+),522412..522414(+)	522959,522856,522604,522429,523151	WP_003419394.1	acyl-CoA dehydrogenase	100.0	23.5	54.5
MGA_442	LOCUS_04420	sequence1:524602..524775(-)	frameshift,internal_stop_codon	524463..524465(-)	524610,524571,524396	WP_011730993.1	ferredoxin--NADP reductase	82.5	12.5	63.8
MGA_443	LOCUS_04430	sequence1:525238..525417(+)	frameshift,internal_stop_codon	525564..525566(+),525420..525422(+),525083..525085(+),525029..525031(+)	525152,525587,525112,525242,525212,525070,525016	WP_003419383.1	flavin-dependent monooxygenase oxygenase subunit HsaA	98.3	14.7	70.7
MGA_444	LOCUS_04440	sequence1:526062..526418(+)	frameshift		526520,526370	WP_003419381.1	alpha/beta fold hydrolase	86.4	36.4	67.9
MGA_446	LOCUS_04460	sequence1:527401..527619(-)	frameshift,internal_stop_codon	527646..527648(-),527125..527127(-),527724..527726(-),527146..527148(-)	527201,527525,527367,527176,527401,527408,527767,527742	WP_003901662.1	thiolase domain-containing protein	52.8	9.6	71.1
MGA_447	LOCUS_04470	sequence1:527684..527920(-)	frameshift,internal_stop_codon	527646..527648(-),527724..527726(-)	527408,527525,527767,527401,527933,527742	WP_003901662.1	thiolase domain-containing protein	98.7	21.6	50.6
MGA_453	LOCUS_04530	sequence1:535082..535345(-)	frameshift		535593,535117,535358	WP_003897311.1	crotonase/enoyl-CoA hydratase family protein	88.5	28.9	66.2
MGA_457	LOCUS_04570	sequence1:535895..536056(+)	frameshift,internal_stop_codon	535877..535879(+),536054..536056(+)	535770	WP_003901660.1	acyl-CoA synthetase	96.2	9.3	78.4
MGA_459	LOCUS_04590	sequence1:537253..537714(+)	frameshift,internal_stop_codon	537090..537092(+)	536977,537180,537357,537110	WP_003421145.1	amidohydrolase family protein	75.2	41.4	76.5
MGA_460	LOCUS_04600	sequence1:537711..537965(+)	frameshift		537953	WP_003900872.1	acetolactate synthase large subunit	96.4	15.7	91.4
MGA_461	LOCUS_04610	sequence1:537988..539259(+)	frameshift		537953	WP_010907682.1	acetolactate synthase large subunit	100.0	82.1	91.7
MGA_462	LOCUS_04620	sequence1:540072..540332(-)	frameshift,internal_stop_codon	539990..539992(-),539996..539998(-),539837..539839(-),540065..540067(-),539933..539935(-)	540074	WP_003901655.1	long-chain-fatty-acid--CoA ligase FadD17	52.3	9.0	73.3
MGA_463	LOCUS_04630	sequence1:540719..540931(-)	frameshift,internal_stop_codon	541003..541005(-),540719..540721(-)	540990,540615,540715,540622,540959	WP_010950903.1	acyl-CoA dehydrogenase family protein	85.7	16.6	51.6
MGA_464	LOCUS_04640	sequence1:541003..541311(-)	frameshift,internal_stop_codon	541003..541005(-)	540990,540959	WP_003419000.1	acyl-CoA dehydrogenase family protein	85.3	23.3	63.2
MGA_465	LOCUS_04650	sequence1:541631..541816(-)	frameshift,internal_stop_codon	541631..541633(-),541957..541959(-),541543..541545(-)	541515,541947,541868	WP_003418997.1	acyl-CoA dehydrogenase	100.0	15.2	60.7
MGA_466	LOCUS_04660	sequence1:545085..545336(+)	frameshift		544946,545027,544829,545309	WP_003897299.1	ABC transporter permease	75.9	23.9	65.7
MGA_467	LOCUS_04670	sequence1:545809..546402(+)	frameshift,internal_stop_codon	546540..546542(+),545618..545620(+),545567..545569(+),546516..546518(+)	545584,545698,545798,546361,545802	WP_003418979.1	virulence factor Mce4A	93.4	46.0	66.3
MGA_468	LOCUS_04680	sequence1:546371..546517(+)	frameshift,internal_stop_codon	546539..546541(+),546515..546517(+)	546360	WP_003418979.1	virulence factor Mce4A	95.8	11.5	71.7
MGA_475	LOCUS_04750	sequence1:558569..558745(+)	frameshift,internal_stop_codon	558781..558783(+),558745..558747(+)	558656,559009,558692,558507,558574,558543,558868,558810	WP_003418277.1	glutamate decarboxylase	100.0	12.4	48.3
MGA_484	LOCUS_04840	sequence1:567231..567491(-)	frameshift,internal_stop_codon	567492..567494(-)	567311	WP_010907698.1	WhiB family transcriptional regulator	80.2	67.6	88.4
MGA_497	LOCUS_04970	sequence1:587507..587710(-)	frameshift,internal_stop_codon	587936..587938(-)	587945,587853,587926,587759	WP_010907710.1	substrate-binding domain-containing protein	62.7	12.2	81.0
MGA_498	LOCUS_04980	sequence1:588328..588582(-)	frameshift		588345,588251,588134,588287	WP_010907710.1	substrate-binding domain-containing protein	91.7	22.3	76.6
MGA_499	LOCUS_04990	sequence1:589260..589544(+)	frameshift,internal_stop_codon	589765..589767(+),589184..589186(+),589732..589734(+),589591..589593(+)	589153,589650,589562,589543,589015,589788	WP_003900042.1	DNA polymerase Y family protein	98.9	17.6	72.0
MGA_506	LOCUS_05060	sequence1:597472..597651(-)	frameshift,internal_stop_codon	597365..597367(-),597764..597766(-),597470..597472(-),597689..597691(-),597761..597763(-),597782..597784(-),597374..597376(-)	597736,597721,597876,597830	WP_187684718.1	IS3 family transposase	98.3	14.0	55.2
MGA_511	LOCUS_05110	sequence1:603633..603797(-)	frameshift,internal_stop_codon	603928..603930(-),603633..603635(-)	603804	WP_003900036.1	diacyglycerol O-acyltransferase	100.0	12.1	64.8
MGA_513	LOCUS_05130	sequence1:606337..606510(+)	frameshift,internal_stop_codon	606508..606510(+)	606332,606549	WP_041322404.1	nitroreductase family protein	100.0	26.6	86.0
MGA_514	LOCUS_05140	sequence1:606786..607067(+)	frameshift,internal_stop_codon	606508..606510(+)	606802,606549,606911	WP_041322404.1	nitroreductase family protein	38.7	16.8	97.2
MGA_516	LOCUS_05160	sequence1:608033..608218(+)	frameshift		608434,607909,608216,608280,607978,608379	WP_003900676.1	sensor histidine kinase	96.7	6.7	67.8
MGA_521	LOCUS_05210	sequence1:616372..616551(+)	frameshift,internal_stop_codon	616302..616304(+),616272..616274(+),616844..616846(+)	616322,616530,616244,616407,616380,616759	WP_011730039.1	DUF853 family protein	69.5	7.8	73.2
MGA_524	LOCUS_05240	sequence1:619599..619859(-)	partial			WP_010907725.1	MmpS family transport accessory protein	100.0	33.2	95.3
MGA_528	LOCUS_05280	sequence1:621193..621585(-)	frameshift		621204	WP_003400603.1	reverse transcriptase domain-containing protein	95.4	51.7	64.5
MGA_532	LOCUS_05320	sequence1:623030..623587(-)	partial			WP_003412728.1	enoyl-CoA hydratase	97.3	68.8	53.9
MGA_536	LOCUS_05360	sequence1:628560..628826(-)	frameshift		629088,628618,628843,628975,628631,628692,628951,629081,628602	WP_010950749.1	acyl-CoA thioesterase II	93.2	27.8	47.6
MGA_560	LOCUS_05600	sequence1:657562..657795(-)	frameshift		657923,657819,657846,657895	WP_003899392.1	polyamine aminopropyltransferase	93.5	13.8	58.3
MGA_578	LOCUS_05770	sequence1:681816..682040(+)	frameshift,internal_stop_codon	681640..681642(+),681742..681744(+),682039..682041(+)	681933,681908,681804,681829	WP_003413359.1	Rv2578c family radical SAM protein	93.2	21.5	59.5
MGA_579	LOCUS_05780	sequence1:682698..682880(-)	frameshift,internal_stop_codon	682519..682521(-),682698..682700(-),682665..682667(-),682947..682949(-),682644..682646(-)	682528,683058,682470,682538,682445	WP_003413355.1	metallophosphoesterase family protein	100.0	11.3	61.7
MGA_582	LOCUS_05810	sequence1:684941..685486(+)	partial			WP_005109726.1	dihydrodipicolinate synthase family protein	86.2	52.9	57.7
MGA_583	LOCUS_05820	sequence1:685619..685924(-)	frameshift,internal_stop_codon	685963..685965(-),686060..686062(-)	686026,685971	WP_003899384.1	neutral zinc metallopeptidase	72.3	24.9	63.0
MGA_584	LOCUS_05830	sequence1:686572..686781(-)	frameshift		686661,686885,686839	WP_085334929.1	oxidoreductase	59.4	14.9	65.9
MGA_587	LOCUS_05860	sequence1:691994..692161(-)	frameshift,internal_stop_codon	692297..692299(-)	692208,692290,692180	WP_003413336.1	MmcQ/YjbR family DNA-binding protein	87.3	37.2	66.7
MGA_588	LOCUS_05870	sequence1:693123..693362(+)	frameshift,internal_stop_codon	693085..693087(+),693037..693039(+)	692899,693341,692951,693545,693117,693198	WP_003413330.1	circularly permuted type 2 ATP-grasp protein	94.9	11.7	42.7
MGA_590	LOCUS_05890	sequence1:693781..694056(+)	frameshift,internal_stop_codon	694092..694094(+)	694115,694037,694215,693674,694046,693551	WP_003911903.1	circularly permuted type 2 ATP-grasp protein	95.6	11.5	48.0
MGA_591	LOCUS_05900	sequence1:694139..694435(+)	frameshift		694113,694435,694216,694092,694047	WP_005111384.1	circularly permuted type 2 ATP-grasp protein	73.5	8.8	46.1
MGA_592	LOCUS_05910	sequence1:694464..694844(+)	frameshift		694432	WP_003911903.1	circularly permuted type 2 ATP-grasp protein	100.0	14.3	58.7
MGA_593	LOCUS_05920	sequence1:694851..695261(+)	frameshift		695228	WP_010907759.1	transglutaminase family protein	91.9	39.3	82.4
MGA_594	LOCUS_05930	sequence1:695546..695734(+)	frameshift		695616,695723,695719	WP_011728762.1	transglutaminase family protein	83.9	21.2	53.8
MGA_595	LOCUS_05940	sequence1:695780..696025(+)	frameshift,internal_stop_codon	696035..696037(+),696032..696034(+),696050..696052(+),695993..695995(+)	696288,695825,696194,695829,695974,696167,696079	WP_003894400.1	putative zinc-binding metallopeptidase	61.7	15.5	54.7
MGA_618	LOCUS_06170	sequence1:719754..720149(-)	frameshift,internal_stop_codon	719547..719549(-),719752..719754(-),720305..720307(-),719911..719913(-)	719634,719859,720196,719917	WP_003918234.1	serine hydrolase domain-containing protein	97.7	32.4	59.2
MGA_619	LOCUS_06180	sequence1:720986..721324(-)	frameshift,internal_stop_codon	720863..720865(-),721399..721401(-),721072..721074(-)	721585,721362,720981,720905,721119	WP_009936020.1	HNH endonuclease signature motif containing protein	60.7	14.3	80.9
MGA_620	LOCUS_06190	sequence1:722609..722788(+)	frameshift		722643,722588	WP_003894426.1	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	59.3	18.9	80.0
MGA_623	LOCUS_06220	sequence1:725130..725516(+)	frameshift		725031	WP_011728777.1	transporter	81.2	62.7	50.0
MGA_636	LOCUS_06350	sequence1:738757..739095(-)	frameshift,internal_stop_codon	739097..739099(-),739295..739297(-),739310..739312(-)	738794,739187,739060,739237,738890,739227,738924	WP_003407276.1	alpha/beta hydrolase	90.2	30.4	50.5
MGA_637	LOCUS_06360	sequence1:740180..740386(+)	frameshift,internal_stop_codon	740226..740228(+),739968..739970(+),740385..740387(+),740121..740123(+),739989..739991(+)	740249	WP_003898862.1	lysoplasmalogenase	70.6	18.4	68.8
MGA_644	LOCUS_06430	sequence1:746818..747090(+)	frameshift,internal_stop_codon	746680..746682(+)	746531,747091,746826,747067,746589	WP_003407303.1	16S rRNA m5C967 methyltransferase	87.8	17.3	74.7
MGA_645	LOCUS_06440	sequence1:747091..747408(+)	frameshift,internal_stop_codon	747407..747409(+)	747602,747427,747090,746825,747066	WP_003898865.1	16S rRNA m5C967 methyltransferase	100.0	26.0	72.3
MGA_646	LOCUS_06450	sequence1:747449..747625(+)	frameshift,internal_stop_codon	747406..747408(+)	747601,747426	WP_003407303.1	16S rRNA m5C967 methyltransferase	87.9	11.2	70.6
MGA_659	LOCUS_06580	sequence1:760412..760606(+)	frameshift,internal_stop_codon	760202..760204(+)	760422,760310,760207	WP_003898875.1	wax ester/triacylglycerol synthase family O-acyltransferase	82.8	11.5	81.1
MGA_662	LOCUS_06610	sequence1:761989..762234(+)	frameshift,internal_stop_codon	762405..762407(+),761803..761805(+),762423..762425(+),761932..761934(+)	761955,761892,762149,762342,762091,762379,762131,762294,762239	WP_003898877.1	DUF3556 domain-containing protein	42.0	5.8	82.4
MGA_664	LOCUS_06630	sequence1:763181..763585(+)	partial			WP_010907804.1	hypothetical protein	55.2	37.6	70.3
MGA_671	LOCUS_06700	sequence1:775886..776089(+)	partial			WP_010907812.1	hypothetical protein	79.1	69.7	73.6
MGA_675	LOCUS_06740	sequence1:780016..780645(-)	frameshift		780712,780737	WP_003407437.1	glucose-6-phosphate dehydrogenase assembly protein OpcA	99.5	72.3	69.4
MGA_676	LOCUS_06750	sequence1:780693..780893(-)	frameshift		780737,780718	WP_003911520.1	glucose-6-phosphate dehydrogenase assembly protein OpcA	92.4	21.8	71.2
MGA_677	LOCUS_06760	sequence1:780943..781131(-)	internal_stop_codon	781147..781149(-),781423..781425(-)		WP_003407443.1	glucose-6-phosphate dehydrogenase	100.0	12.1	71.0
MGA_678	LOCUS_06770	sequence1:781147..781374(-)	frameshift,internal_stop_codon	781422..781424(-),781146..781148(-)	781473,781642,781515	WP_003407443.1	glucose-6-phosphate dehydrogenase	97.3	14.2	71.2
MGA_679	LOCUS_06780	sequence1:781423..781602(-)	frameshift,internal_stop_codon	781145..781147(-),781421..781423(-)	781472,781641,781514,781869	WP_011728813.1	glucose-6-phosphate dehydrogenase	100.0	11.4	61.0
MGA_680	LOCUS_06790	sequence1:781634..781840(-)	frameshift,internal_stop_codon	781420..781422(-),782013..782015(-)	782079,782118,781640,781513,781868,781471	WP_003407443.1	glucose-6-phosphate dehydrogenase	95.6	13.4	75.4
MGA_696	LOCUS_06950	sequence1:801768..802166(-)	frameshift,internal_stop_codon	802184..802186(-)	801802,802291,801739,801546	WP_011731331.1	acyl-CoA dehydrogenase family protein	86.4	30.9	54.4
MGA_697	LOCUS_06960	sequence1:803055..803282(-)	frameshift,internal_stop_codon	803025..803027(-),803158..803160(-),803053..803055(-),803161..803163(-)	803142,802886,803275,802988,803473,802904,803348,803221,802935,803480,802939,803037,803391	WP_011731330.1	acyl-CoA dehydrogenase family protein	97.3	18.7	49.3
MGA_698	LOCUS_06970	sequence1:804311..804505(+)	frameshift,internal_stop_codon	804194..804196(+),804506..804508(+)	804033,804123,804283,804175	WP_003412373.1	ComEA family DNA-binding protein	79.7	19.2	54.4
MGA_704	LOCUS_07030	sequence1:807243..807494(+)	frameshift,internal_stop_codon	807240..807242(+),807492..807494(+)	807576,807554	WP_010907834.1	circularly permuted type 2 ATP-grasp protein	100.0	14.8	74.7
MGA_706	LOCUS_07050	sequence1:808370..808543(+)	frameshift,internal_stop_codon	808713..808715(+),808569..808571(+)	808259,808295,808231,808745,808503,808507,808155,808412	WP_010907834.1	circularly permuted type 2 ATP-grasp protein	52.6	5.3	86.7
MGA_707	LOCUS_07060	sequence1:808994..809221(+)	frameshift,internal_stop_codon	809219..809221(+),808937..808939(+)	808881,809026	WP_010907835.1	alpha-E domain-containing protein	77.3	17.8	84.5
MGA_708	LOCUS_07070	sequence1:809464..809745(+)	frameshift		809818,809972,809718	WP_010907836.1	transglutaminase family protein	91.4	30.5	89.4
MGA_709	LOCUS_07080	sequence1:810548..810979(-)	frameshift,internal_stop_codon	811190..811192(-),810992..810994(-)	811137,810850,811217,810738,811141,811094	WP_003412350.1	Rv2407 family type 3 sulfatase	89.5	44.3	46.2
MGA_713	LOCUS_07120	sequence1:814434..814658(-)	frameshift,internal_stop_codon	814667..814669(-),814745..814747(-),814790..814792(-)	814777	WP_011729900.1	glycoside hydrolase family 15 protein	87.8	9.7	73.8
MGA_714	LOCUS_07130	sequence1:814790..814942(-)	frameshift,internal_stop_codon	814971..814973(-),814788..814790(-),815037..815039(-),815133..815135(-),814743..814745(-),814665..814667(-),815091..815093(-)	815048,815178,814778,814982	WP_003901398.1	glycoside hydrolase family 15 protein	100.0	7.8	74.0
MGA_715	LOCUS_07140	sequence1:815176..815463(-)	frameshift,internal_stop_codon	814971..814973(-),815474..815476(-),815655..815657(-),815037..815039(-),815133..815135(-),815091..815093(-)	815522,815428,814997,815670,815048,815178	WP_003901398.1	glycoside hydrolase family 15 protein	85.3	12.6	67.9
MGA_716	LOCUS_07150	sequence1:817194..817370(-)	frameshift,internal_stop_codon	817508..817510(-),817194..817196(-),817092..817094(-),817005..817007(-)	817392,817553,817474,817157,817094,817061	WP_005110188.1	FAD-dependent oxidoreductase	100.0	18.7	38.5
MGA_720	LOCUS_07190	sequence1:819717..820037(+)	frameshift,internal_stop_codon	820035..820037(+),819714..819716(+),820104..820106(+),819552..819554(+)	819448,819825,819788,819853	WP_003412332.1	sulfate ABC transporter permease subunit CysT	100.0	36.7	59.4
MGA_721	LOCUS_07200	sequence1:821854..822081(+)	frameshift,internal_stop_codon	821807..821809(+),822080..822082(+)	821848,822299,821700,822133	WP_010886182.1	IS607 family element RNA-guided endonuclease TnpB	97.3	17.9	52.1
MGA_723	LOCUS_07220	sequence1:825422..825706(-)	frameshift,internal_stop_codon	825285..825287(-),825481..825483(-),825363..825365(-),825158..825160(-),825823..825825(-),825273..825275(-),825179..825181(-)	825744,825378,825236,825689,825499	WP_003416052.1	CoA ester lyase	71.3	21.8	73.1
MGA_731	LOCUS_07300	sequence1:834545..834739(-)	frameshift,internal_stop_codon	834545..834547(-)	834290,834466,834438	WP_003414057.1	class I SAM-dependent DNA methyltransferase	70.3	10.0	53.7
MGA_732	LOCUS_07310	sequence1:835416..835586(-)	frameshift,internal_stop_codon	835393..835395(-),835585..835587(-),835414..835416(-),835332..835334(-)	835780,835220,835741,835623,835341	WP_011728523.1	crosslink repair DNA glycosylase YcaQ family protein	100.0	14.3	64.9
MGA_736	LOCUS_07350	sequence1:838087..838275(+)	frameshift,internal_stop_codon	838307..838309(+),837797..837799(+),838035..838037(+)	838058,837859,838278,838242	WP_003414079.1	dienelactone hydrolase family protein	83.9	21.6	58.5
MGA_738	LOCUS_07370	sequence1:838976..839278(-)	partial			WP_013225001.1	acyl-CoA dehydrogenase family protein	98.0	27.2	47.0
MGA_739	LOCUS_07380	sequence1:840140..840316(-)	frameshift,internal_stop_codon	839920..839922(-),840317..840319(-),840140..840142(-),840368..840370(-)	840040	WP_005115331.1	acyl-CoA dehydrogenase family protein	86.2	11.4	54.0
MGA_740	LOCUS_07390	sequence1:840840..841028(-)	frameshift,internal_stop_codon	841180..841182(-),841065..841067(-),841294..841296(-),840723..840725(-)	840896,840738,841188,840773,841254,840742,841227,841143	WP_003414081.1	SDR family oxidoreductase	72.6	17.3	60.0
MGA_745	LOCUS_07440	sequence1:843681..844103(-)	frameshift		843857,844134	WP_010908387.1	flavodoxin family protein	58.6	54.3	89.0
MGA_751	LOCUS_07500	sequence1:846904..847152(+)	frameshift,internal_stop_codon	847152..847154(+)	847169,846865,846962,846804,847389,846651,847341	WP_005092091.1	HNH endonuclease signature motif containing protein	70.7	13.1	48.3
MGA_753	LOCUS_07520	sequence1:847612..848124(-)	frameshift		848387,848116	WP_003414104.1	PDR/VanB family oxidoreductase	96.5	53.1	82.9
MGA_754	LOCUS_07530	sequence1:848114..848356(-)	frameshift,internal_stop_codon	848514..848516(-)	848387,848116	WP_003414104.1	PDR/VanB family oxidoreductase	98.8	25.6	79.7
MGA_755	LOCUS_07540	sequence1:849071..849556(-)	frameshift		849632	WP_003414107.1	metal-dependent hydrolase	100.0	45.2	88.2
MGA_756	LOCUS_07550	sequence1:849630..849980(-)	frameshift		849984,849632	WP_003414107.1	metal-dependent hydrolase	100.0	33.4	72.3
MGA_757	LOCUS_07560	sequence1:850207..850623(-)	frameshift		850242,850278	WP_003899476.1	Lrp/AsnC family transcriptional regulator	100.0	78.8	63.1
MGA_762	LOCUS_07610	sequence1:856366..856710(-)	frameshift		856857,856475,856454,856718	WP_003414680.1	PPE family protein	100.0	27.9	38.6
MGA_768	LOCUS_07670	sequence1:865559..865762(-)	frameshift		865722,865575	WP_015293199.1	effector	73.1	52.1	71.4
MGA_774	LOCUS_07730	sequence1:884024..884653(-)	frameshift		884706	WP_010908445.1	alpha/beta hydrolase	100.0	40.9	89.0
MGA_775	LOCUS_07740	sequence1:884662..885480(-)	frameshift		884706	WP_010908445.1	alpha/beta hydrolase	96.0	51.1	90.4
MGA_778	LOCUS_07770	sequence1:888334..888528(-)	frameshift,internal_stop_codon	888332..888334(-)	888577,888172,888526,888127	WP_011729712.1	wax ester/triacylglycerol synthase family O-acyltransferase	93.8	12.9	68.3
MGA_781	LOCUS_07800	sequence1:891435..891599(+)	frameshift,internal_stop_codon	891313..891315(+),891352..891354(+),891250..891252(+)	891225,891537	WP_010950676.1	CYTH and CHAD domain-containing protein	63.0	6.6	76.5
MGA_782	LOCUS_07810	sequence1:893244..893531(+)	frameshift,internal_stop_codon	893582..893584(+)	893665,893284,893557,893526,893079,893435,892991	WP_011027763.1	M15 family metallopeptidase	56.8	20.1	58.2
MGA_791	LOCUS_07900	sequence1:900870..901061(-)	frameshift,internal_stop_codon	900647..900649(-),901065..901067(-),901092..901094(-),901165..901167(-)	900932,901226,900812,901198,900719,900667,900670,901119	WP_003897072.1	alpha/beta fold hydrolase	65.1	11.1	70.7
MGA_795	LOCUS_07940	sequence1:906824..907108(-)	frameshift,internal_stop_codon	907179..907181(-),906822..906824(-),907115..907117(-)	907172,906900,907029,906870,907069	WP_003411527.1	peroxiredoxin AhpE	100.0	62.1	51.6
MGA_812	LOCUS_08110	sequence1:924882..925274(+)	frameshift		925262	WP_003400603.1	reverse transcriptase domain-containing protein	95.4	51.7	64.5
MGA_817	LOCUS_08160	sequence1:927577..927933(-)	frameshift,internal_stop_codon	927975..927977(-)	928149,927935	WP_003415003.1	pyruvate carboxylase	88.1	9.2	61.5
MGA_818	LOCUS_08170	sequence1:928129..928320(-)	frameshift,internal_stop_codon	928535..928537(-),928409..928411(-),927975..927977(-)	928306,928149,927935	WP_003415003.1	pyruvate carboxylase	84.1	4.7	64.2
MGA_819	LOCUS_08180	sequence1:928535..928885(-)	frameshift,internal_stop_codon	928407..928409(-),928533..928535(-),928993..928995(-)	928304,929108,928917,928728,929160,929083,928622	WP_011731427.1	pyruvate carboxylase	100.0	10.6	50.0
MGA_820	LOCUS_08190	sequence1:928993..929271(-)	frameshift,internal_stop_codon	929411..929413(-),929525..929527(-),929275..929277(-),928992..928994(-)	929153,929356,929082,929235,929107,928916,928727,929210	WP_003415003.1	pyruvate carboxylase	100.0	8.0	44.7
MGA_821	LOCUS_08200	sequence1:929545..929835(-)	frameshift,internal_stop_codon	929961..929963(-),929407..929409(-),929521..929523(-),929271..929273(-)	929764,929556,929671,929355,929629,929855,929807	WP_003415003.1	pyruvate carboxylase	95.8	8.2	53.3
MGA_823	LOCUS_08220	sequence1:929961..930128(-)	frameshift,internal_stop_codon	929960..929962(-),930134..930136(-)	930273,929763,929670,929854,930170,930381,929806	WP_003415003.1	pyruvate carboxylase	90.9	4.4	66.0
MGA_827	LOCUS_08260	sequence1:932884..933324(-)	frameshift,internal_stop_codon	933541..933543(-)	933440,932961,932801,932867,932672,932608,933328,933465	WP_003415015.1	lipase/esterase LipN	83.6	33.8	59.1
MGA_830	LOCUS_08290	sequence1:935510..935878(-)	frameshift,internal_stop_codon	935894..935896(-),935945..935947(-)	935461,935599	WP_003415024.1	HNH endonuclease family protein	83.6	43.5	58.1
MGA_832	LOCUS_08310	sequence1:938340..938558(-)	frameshift		938547,938741,938638	WP_003902383.1	DAK2 domain-containing protein	94.4	11.4	64.7
MGA_833	LOCUS_08320	sequence1:938730..938864(-)	frameshift		938924,938988,938636,939057,938866,938899,938739,938545	WP_003415028.1	DAK2 domain-containing protein	93.2	8.7	82.9
MGA_834	LOCUS_08330	sequence1:938866..939258(-)	frameshift		938987,938923,938635,939216,939056,938898,938865,938738,939357	WP_003415028.1	DAK2 domain-containing protein	86.2	23.4	51.7
MGA_845	LOCUS_08440	sequence1:948552..949130(+)	frameshift		949088,949190	WP_041322901.1	bifunctional NUDIX hydrolase/histidine phosphatase family protein	93.2	57.4	88.3
MGA_846	LOCUS_08450	sequence1:949227..949442(+)	frameshift		949088,949190	WP_041322901.1	bifunctional NUDIX hydrolase/histidine phosphatase family protein	98.6	22.4	78.6
MGA_847	LOCUS_08460	sequence1:949513..950100(-)	partial			WP_003415107.1	DNA-binding protein HupB	53.8	49.1	96.2
MGA_855	LOCUS_08540	sequence1:957367..957786(+)	frameshift,internal_stop_codon	957907..957909(+),957170..957172(+),957545..957547(+)	957123,957348,957764,957861,957159,957607,957483,957229,957294,957239,957727	WP_003415142.1	MFS transporter	86.3	27.0	50.4
MGA_874	LOCUS_08730	sequence1:982115..982369(-)	frameshift,internal_stop_codon	982562..982564(-),982644..982646(-)	982598,982376,982170,982555,982204,982527	WP_003900617.1	GNAT family N-acetyltransferase	88.1	26.3	52.7
MGA_882	LOCUS_08810	sequence1:990823..991053(-)	internal_stop_codon	991054..991056(-)		WP_013227176.1	TetR/AcrR family transcriptional regulator	56.6	19.7	62.8
MGA_884	LOCUS_08830	sequence1:992463..993122(+)	frameshift		993008,993217,992482,993078,993148	WP_013227174.1	fumarylacetoacetate hydrolase family protein	79.5	55.6	56.3
MGA_890	LOCUS_08890	sequence1:997196..997387(-)	frameshift,internal_stop_codon	997560..997562(-)	997460,997354,997643,997213,997405	WP_178125321.1	class I SAM-dependent methyltransferase	74.6	11.6	68.1
MGA_901	LOCUS_09000	sequence1:1011059..1011367(-)	frameshift,internal_stop_codon	1011645..1011647(-)	1011067,1011045,1011353,1011003,1010925	WP_003899895.1	NAD(P)/FAD-dependent oxidoreductase	91.2	17.7	88.2
MGA_902	LOCUS_09010	sequence1:1011333..1011590(-)	frameshift,internal_stop_codon	1011644..1011646(-)	1011352,1011066,1011044,1011679	WP_003899895.1	NAD(P)/FAD-dependent oxidoreductase	92.9	15.1	69.6
MGA_903	LOCUS_09020	sequence1:1011653..1011871(-)	frameshift,internal_stop_codon	1011643..1011645(-),1011907..1011909(-)	1011948,1011678	WP_003899895.1	NAD(P)/FAD-dependent oxidoreductase	88.9	12.2	76.6
MGA_904	LOCUS_09030	sequence1:1011895..1012446(-)	frameshift,internal_stop_codon	1011643..1011645(-),1011907..1011909(-)	1011948,1011678	WP_003899895.1	NAD(P)/FAD-dependent oxidoreductase	79.2	27.7	77.9
MGA_910	LOCUS_09090	sequence1:1017052..1017231(-)	frameshift,internal_stop_codon	1017052..1017054(-),1016965..1016967(-)	1017256,1016835	WP_003415983.1	NADPH-dependent FMN reductase	100.0	31.5	66.1
MGA_912	LOCUS_09110	sequence1:1018424..1018714(+)	frameshift,internal_stop_codon	1018199..1018201(+),1018476..1018478(+),1018951..1018953(+)	1018373,1018279,1018665,1018348,1018702,1018191,1018484,1018808,1018172	WP_011727354.1	DNA polymerase IV	69.8	18.8	50.7
MGA_914	LOCUS_09130	sequence1:1020071..1020289(-)	frameshift,internal_stop_codon	1020314..1020316(-)	1020472,1020561,1020292,1020548	WP_003415987.1	TetR/AcrR family transcriptional regulator	100.0	33.3	58.3
MGA_916	LOCUS_09150	sequence1:1021343..1021579(+)	frameshift,internal_stop_codon	1021229..1021231(+),1021260..1021262(+),1021619..1021621(+)	1021280,1021201,1021237,1021334,1021551	WP_003415988.1	cytochrome P450	85.9	13.8	60.3
MGA_917	LOCUS_09160	sequence1:1021644..1022171(+)	frameshift,internal_stop_codon	1022169..1022171(+),1022269..1022271(+),1021617..1021619(+)	1022210,1021549	WP_005056581.1	cytochrome P450	98.9	35.2	55.5
MGA_924	LOCUS_09230	sequence1:1031423..1031644(-)	frameshift,internal_stop_codon	1031230..1031232(-),1031296..1031298(-),1031662..1031664(-),1031677..1031679(-)	1031442,1031845,1031718,1031244,1031196,1031870	WP_011726646.1	IS1634-like element IS1549 family transposase	94.5	14.1	66.7
MGA_938	LOCUS_09370	sequence1:1049302..1049640(+)	frameshift,internal_stop_codon	1049663..1049665(+),1049816..1049818(+)	1049637	WP_003416005.1	TetR/AcrR family transcriptional regulator	100.0	55.4	57.1
MGA_939	LOCUS_09380	sequence1:1051231..1051368(-)	frameshift,internal_stop_codon	1051454..1051456(-),1051231..1051233(-),1051063..1051065(-),1051475..1051477(-),1051405..1051407(-)	1051035,1051420,1050983	WP_003414104.1	PDR/VanB family oxidoreductase	100.0	14.6	68.9
MGA_942	LOCUS_09410	sequence1:1053503..1053694(-)	frameshift,internal_stop_codon	1053501..1053503(-),1053366..1053368(-),1053962..1053964(-)	1053841,1053765,1053272,1053738,1053675	WP_003899902.1	phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	90.5	10.4	61.4
MGA_948	LOCUS_09470	sequence1:1061434..1061607(-)	frameshift		1061633,1061462	WP_010908526.1	hypothetical protein	84.2	42.1	75.0
MGA_949	LOCUS_09480	sequence1:1061622..1061801(-)	frameshift		1061633,1061462	WP_010908526.1	hypothetical protein	78.0	40.4	82.6
MGA_955	LOCUS_09540	sequence1:1066649..1066966(-)	frameshift,internal_stop_codon	1066660..1066662(-),1067098..1067100(-)	1066984,1066740,1066966	WP_005110223.1	TldD/PmbA family protein	70.5	14.7	67.6
MGA_956	LOCUS_09550	sequence1:1067098..1067334(-)	frameshift,internal_stop_codon	1067617..1067619(-),1067560..1067562(-),1067098..1067100(-)	1067332,1066966,1066984,1067439,1067375	WP_003411929.1	TldD/PmbA family protein	98.7	15.4	69.2
MGA_961	LOCUS_09600	sequence1:1072193..1072444(-)	frameshift,internal_stop_codon	1072204..1072206(-),1072475..1072477(-)	1072498,1072595,1072725,1072646,1072071,1072219,1072671	WP_003411955.1	amino acid permease	96.4	16.8	70.0
MGA_962	LOCUS_09610	sequence1:1072720..1072884(-)	frameshift,internal_stop_codon	1072472..1072474(-),1072885..1072887(-),1072962..1072964(-)	1072994,1072643,1072912,1072946,1073108,1072725,1072501,1072604,1073084,1072668	WP_003411955.1	amino acid permease	96.3	10.9	63.5
MGA_964	LOCUS_09630	sequence1:1073496..1073696(-)	frameshift,internal_stop_codon	1073370..1073372(-),1073495..1073497(-)	1073745,1073461,1073702,1073718,1073436,1073293,1073342	WP_011727654.1	ornithine--oxo-acid transaminase	92.4	14.5	72.1
MGA_965	LOCUS_09640	sequence1:1073674..1073928(-)	frameshift,internal_stop_codon	1074042..1074044(-),1074070..1074072(-),1073494..1073496(-)	1073744,1073460,1073701,1073717,1073915,1073435,1074063	WP_011727654.1	ornithine--oxo-acid transaminase	86.9	17.3	52.1
MGA_967	LOCUS_09660	sequence1:1075185..1075502(+)	frameshift		1075512,1075391	WP_003411963.1	Lrp/AsnC family transcriptional regulator	64.8	45.9	60.3
MGA_968	LOCUS_09670	sequence1:1078462..1078719(-)	frameshift,internal_stop_codon	1078497..1078499(-)	1078547,1078326,1078759,1078951,1078330,1078731	WP_063001146.1	ATP-binding cassette domain-containing protein	63.5	6.7	58.6
MGA_969	LOCUS_09680	sequence1:1078704..1078952(-)	frameshift,internal_stop_codon	1079165..1079167(-),1079162..1079164(-),1078497..1078499(-)	1078547,1078759,1078731,1078951	WP_063001146.1	ATP-binding cassette domain-containing protein	68.3	6.4	50.0
MGA_970	LOCUS_09690	sequence1:1078880..1079155(-)	frameshift,internal_stop_codon	1079165..1079167(-),1079162..1079164(-)	1078759,1078734,1078951	WP_003893049.1	FHA domain-containing protein	68.1	7.1	50.0
MGA_971	LOCUS_09700	sequence1:1079646..1079891(-)	frameshift,internal_stop_codon	1079913..1079915(-)	1079660	WP_003408545.1	ATP transporter ATP-binding protein/permease	95.1	8.9	61.0
MGA_972	LOCUS_09710	sequence1:1080490..1080720(-)	frameshift		1080713,1080839,1080541,1080887	WP_003900033.1	NADH:flavin oxidoreductase	75.0	10.9	59.6
MGA_973	LOCUS_09720	sequence1:1080864..1081022(-)	frameshift		1080713,1080839,1080887	WP_003900033.1	NADH:flavin oxidoreductase	90.4	11.9	70.2
MGA_976	LOCUS_09750	sequence1:1082217..1082579(-)	frameshift		1082637	WP_010907871.1	DUF732 domain-containing protein	100.0	76.6	81.8
MGA_981	LOCUS_09800	sequence1:1086325..1086540(+)	frameshift,internal_stop_codon	1086538..1086540(+),1086565..1086567(+),1086307..1086309(+)	1086152,1086793,1086666,1086636	WP_003405897.1	HNH endonuclease signature motif containing protein	97.2	15.3	53.6
MGA_982	LOCUS_09810	sequence1:1086840..1087037(+)	frameshift,internal_stop_codon	1087037..1087039(+),1086565..1086567(+),1087052..1087054(+)	1086802,1087187,1087078,1086666,1086636	WP_003906521.1	HNH endonuclease signature motif containing protein	96.9	14.0	68.3
MGA_984	LOCUS_09830	sequence1:1087399..1087671(-)	frameshift,internal_stop_codon	1087398..1087400(-),1087736..1087738(-),1087742..1087744(-),1087895..1087897(-)	1087705,1087434,1087470	WP_003417461.1	class I SAM-dependent methyltransferase	76.7	28.4	63.8
MGA_985	LOCUS_09840	sequence1:1087742..1087888(-)	frameshift,internal_stop_codon	1088011..1088013(-),1087894..1087896(-),1087735..1087737(-),1087741..1087743(-)	1087704,1088013	WP_003417461.1	class I SAM-dependent methyltransferase	97.9	19.3	72.3
MGA_987	LOCUS_09860	sequence1:1089287..1089769(-)	frameshift		1089873,1089827	WP_003900028.1	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	100.0	35.0	65.8
MGA_988	LOCUS_09870	sequence1:1089859..1090254(-)	frameshift		1089872,1089832,1090344,1090269,1090495	WP_003900028.1	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	96.9	29.2	66.4
MGA_989	LOCUS_09880	sequence1:1090318..1090554(-)	frameshift		1090344,1090269,1090495	WP_003893059.1	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	65.4	12.4	78.2
MGA_991	LOCUS_09900	sequence1:1091137..1091424(+)	frameshift,internal_stop_codon	1091422..1091424(+)	1091120,1091586,1091638,1091677,1091454	WP_003417452.1	NADP-dependent isocitrate dehydrogenase	97.9	22.7	64.5
MGA_992	LOCUS_09910	sequence1:1092133..1092789(-)	partial			WP_172591901.1	alpha/beta hydrolase	95.0	74.7	89.9
MGA_999	LOCUS_09980	sequence1:1098247..1098483(-)	frameshift,internal_stop_codon	1098126..1098128(-),1098629..1098631(-)	1098269,1098600,1098475,1098668,1098156,1098616,1098554,1098333,1098238	WP_010886161.1	sugar porter family MFS transporter	59.0	10.2	60.8
MGA_1002	LOCUS_10010	sequence1:1101047..1101265(-)	frameshift		1101432,1101048	WP_080603738.1	aspartate aminotransferase family protein	100.0	15.8	72.2
MGA_1013	LOCUS_10120	sequence1:1110105..1110284(+)	frameshift,internal_stop_codon	1110096..1110098(+)	1109944,1110288,1110212,1110496	WP_003407530.1	VWA domain-containing protein	64.4	11.3	68.4
MGA_1016	LOCUS_10150	sequence1:1113791..1114060(-)	frameshift,internal_stop_codon	1113790..1113792(-)	1113588,1113927	WP_003417249.1	phosphatidylinositol-3-phosphatase	50.6	15.1	80.0
MGA_1022	LOCUS_10210	sequence1:1118159..1118524(+)	frameshift,internal_stop_codon	1118141..1118143(+)	1117992,1117940,1117909	WP_003900009.1	M20 family metallopeptidase	96.7	29.7	65.0
MGA_1023	LOCUS_10220	sequence1:1118521..1118724(+)	frameshift		1118948,1118773,1118694	WP_003417220.1	amidohydrolase	86.6	14.9	81.0
MGA_1025	LOCUS_10240	sequence1:1119481..1119651(+)	frameshift,internal_stop_codon	1119268..1119270(+)	1119227,1119645	WP_003417220.1	amidohydrolase	98.2	14.1	89.1
MGA_1028	LOCUS_10270	sequence1:1121441..1121761(+)	frameshift,internal_stop_codon	1121879..1121881(+),1121429..1121431(+),1121759..1121761(+),1121423..1121425(+)	1122008,1121893	WP_009936266.1	NAD(P)H-quinone dehydrogenase	100.0	21.9	75.0
MGA_1029	LOCUS_10280	sequence1:1121886..1122071(+)	frameshift,internal_stop_codon	1121879..1121881(+),1121759..1121761(+)	1122008,1121893,1122150	WP_009936266.1	NAD(P)H-quinone dehydrogenase	62.3	7.7	84.2
MGA_1030	LOCUS_10290	sequence1:1122476..1122685(+)	frameshift		1122368,1122637,1122510	WP_009936266.1	NAD(P)H-quinone dehydrogenase	78.3	11.0	68.5
MGA_1033	LOCUS_10320	sequence1:1125105..1125287(+)	frameshift,internal_stop_codon	1124975..1124977(+)	1125085	WP_010950868.1	RluA family pseudouridine synthase	95.0	18.0	49.1
MGA_1036	LOCUS_10350	sequence1:1127995..1128279(-)	frameshift,internal_stop_codon	1128349..1128351(-),1128449..1128451(-),1127994..1127996(-),1127892..1127894(-),1128361..1128363(-),1128545..1128547(-)	1128370,1127731,1128345,1127882,1128330	WP_010950866.1	ATP-dependent helicase	100.0	5.9	67.0
MGA_1039	LOCUS_10380	sequence1:1129869..1130264(-)	frameshift		1130334	WP_010907890.1	TetR/AcrR family transcriptional regulator	100.0	58.7	91.6
MGA_1041	LOCUS_10400	sequence1:1130601..1130867(-)	frameshift,internal_stop_codon	1130904..1130906(-),1130958..1130960(-)	1131032,1131125	WP_010950865.1	aldehyde dehydrogenase family protein	100.0	17.6	63.6
MGA_1043	LOCUS_10420	sequence1:1132799..1133086(-)	frameshift,internal_stop_codon	1133090..1133092(-)	1132544,1132605,1132969,1132699,1132941,1132830,1132751	WP_003417184.1	VOC family protein	93.7	21.4	59.6
MGA_1044	LOCUS_10430	sequence1:1133181..1133384(+)	frameshift,internal_stop_codon	1133490..1133492(+)	1133498,1133513,1133178,1133370,1133470	WP_003900004.1	L-lysine 6-transaminase	98.5	14.7	72.7
MGA_1045	LOCUS_10440	sequence1:1133544..1133825(+)	frameshift,internal_stop_codon	1133489..1133491(+)	1133512,1133800,1133834,1134062,1133947,1133880,1133369,1133497,1133469	WP_003900004.1	L-lysine 6-transaminase	87.1	18.0	75.3
MGA_1046	LOCUS_10450	sequence1:1134041..1134244(+)	frameshift		1133798,1133878,1133832,1133948,1134063	WP_003900004.1	L-lysine 6-transaminase	86.6	12.9	63.8
MGA_1051	LOCUS_10500	sequence1:1139291..1139584(-)	frameshift,internal_stop_codon	1139609..1139611(-)	1139042,1139317,1139191,1139657,1139097	WP_010907892.1	sulfurtransferase	91.8	30.1	93.3
MGA_1062	LOCUS_10610	sequence1:1149054..1149224(-)	internal_stop_codon	1148880..1148882(-),1149054..1149056(-),1149243..1149245(-)		WP_003404792.1	phosphate ABC transporter permease subunit PstC	96.4	17.2	56.9
MGA_1064	LOCUS_10630	sequence1:1150018..1150194(-)	frameshift,internal_stop_codon	1150270..1150272(-),1150306..1150308(-)	1150372,1149988,1149877,1150170,1150266,1150046,1150015	WP_003404786.1	phosphate ABC transporter substrate-binding protein PstS	79.3	12.3	60.9
MGA_1065	LOCUS_10640	sequence1:1151220..1151390(-)	frameshift,internal_stop_codon	1151219..1151221(-)	1151197,1151138,1151413,1151160	WP_010950858.1	CoA transferase	100.0	14.2	67.9
MGA_1066	LOCUS_10650	sequence1:1151387..1151743(-)	frameshift,internal_stop_codon	1151910..1151912(-),1151823..1151825(-),1151217..1151219(-)	1151136,1151810,1151891,1151411,1151158,1151195	WP_010950858.1	CoA transferase	93.2	26.9	59.1
MGA_1067	LOCUS_10660	sequence1:1151910..1152095(-)	frameshift,internal_stop_codon	1151910..1151912(-),1151823..1151825(-)	1151810,1151891,1152117	WP_010950858.1	CoA transferase	100.0	15.5	63.9
MGA_1070	LOCUS_10690	sequence1:1156569..1157132(-)	internal_stop_codon	1156569..1156571(-)		WP_003417112.1	TIGR03089 family protein	90.9	74.7	71.7
MGA_1075	LOCUS_10740	sequence1:1161716..1161976(+)	frameshift,internal_stop_codon	1162098..1162100(+),1161974..1161976(+)	1162057,1162091,1162205,1162151	WP_003420405.1	hypothetical protein	98.8	29.4	45.1
MGA_1087	LOCUS_10860	sequence1:1173754..1174086(-)	frameshift,internal_stop_codon	1173624..1173626(-),1173702..1173704(-),1173530..1173532(-),1173588..1173590(-),1173977..1173979(-),1173765..1173767(-)	1173635,1173991,1174190,1173967,1173774,1173551,1174132,1173719,1174105	WP_003417051.1	hypothetical protein	97.3	24.0	53.2
MGA_1088	LOCUS_10870	sequence1:1174152..1174658(-)	frameshift,internal_stop_codon	1173974..1173976(-)	1174752,1173988,1174828,1173964,1174734,1174671,1174190,1174129,1174102,1174713	WP_003417051.1	hypothetical protein	91.7	34.2	58.2
MGA_1089	LOCUS_10880	sequence1:1175472..1175657(+)	frameshift,internal_stop_codon	1175320..1175322(+)	1175648,1175793,1175300,1175364,1175814,1175188,1175452	WP_003417049.1	amino acid permease	91.8	11.3	60.7
MGA_1090	LOCUS_10890	sequence1:1175821..1176036(+)	frameshift,internal_stop_codon	1176035..1176037(+)	1175648,1176208,1175793,1175814,1176263	WP_003417049.1	amino acid permease	95.8	13.7	70.6
MGA_1091	LOCUS_10900	sequence1:1176052..1176267(+)	frameshift,internal_stop_codon	1176329..1176331(+),1176035..1176037(+)	1176208,1175793,1176306,1175814,1176263	WP_003417049.1	amino acid permease	69.0	9.9	69.4
MGA_1094	LOCUS_10930	sequence1:1177238..1177633(+)	frameshift,internal_stop_codon	1177661..1177663(+),1177697..1177699(+),1177143..1177145(+),1177116..1177118(+)	1177490,1177238,1177527,1177035,1177069,1177022,1177711	WP_003417047.1	alkane 1-monooxygenase	62.6	19.7	61.0
MGA_1095	LOCUS_10940	sequence1:1177786..1177956(+)	partial			WP_005056265.1	rubredoxin	66.1	55.2	73.0
MGA_1096	LOCUS_10950	sequence1:1178085..1178486(+)	frameshift,internal_stop_codon	1178004..1178006(+),1178049..1178051(+)	1178361,1178564,1178494,1178351	WP_003417042.1	TetR family transcriptional regulator	66.2	41.7	80.7
MGA_1110	LOCUS_11090	sequence1:1195275..1195607(+)	frameshift,internal_stop_codon	1195273..1195275(+),1195685..1195687(+),1195001..1195003(+)	1195265,1195015,1195246,1195088,1195636,1195189,1195578,1195164,1195774	WP_003416919.1	NADPH-dependent stearoyl-CoA 9-desaturase	99.1	27.4	65.0
MGA_1111	LOCUS_11100	sequence1:1195973..1196467(-)	partial			WP_003894393.1	thiolase family protein	94.5	49.5	49.7
MGA_1122	LOCUS_11210	sequence1:1213155..1213487(-)	frameshift,internal_stop_codon	1212950..1212952(-),1213052..1213054(-),1213119..1213121(-)	1213512,1213097,1213187,1212889	WP_003416899.1	NAD(P)-dependent oxidoreductase	89.1	34.8	72.4
MGA_1126	LOCUS_11250	sequence1:1217640..1217888(-)	frameshift		1218008,1218131,1217920,1217974	WP_003416883.1	diacylglycerol kinase family lipid kinase	98.8	25.9	61.4
MGA_1129	LOCUS_11280	sequence1:1220955..1221209(-)	frameshift,internal_stop_codon	1221268..1221270(-),1221216..1221218(-)	1221228,1220966,1220894	WP_011728016.1	acid phosphatase	97.6	40.4	65.9
MGA_1130	LOCUS_11290	sequence1:1221495..1221740(+)	frameshift,internal_stop_codon	1221846..1221848(+),1221777..1221779(+)	1221731,1221917	WP_003917133.1	AAA family ATPase	95.1	30.1	72.5
MGA_1131	LOCUS_11300	sequence1:1221930..1222217(+)	frameshift,internal_stop_codon	1221846..1221848(+),1221777..1221779(+),1222227..1222229(+)	1222274,1221923,1222138,1221734,1222122	WP_003901572.1	AAA family ATPase	88.4	33.5	62.9
MGA_1134	LOCUS_11330	sequence1:1225441..1225845(+)	frameshift,internal_stop_codon	1225843..1225845(+)	1225908	WP_003416873.1	ferritin-like fold-containing protein	98.5	56.3	64.2
MGA_1135	LOCUS_11340	sequence1:1225904..1226143(+)	frameshift,internal_stop_codon	1225843..1225845(+)	1225908	WP_003416873.1	ferritin-like fold-containing protein	67.1	22.9	54.7
MGA_1143	LOCUS_11420	sequence1:1231498..1231716(-)	frameshift,internal_stop_codon	1231772..1231774(-)	1231747	WP_003416847.1	MGMT family protein	73.6	52.5	69.8
MGA_1144	LOCUS_11430	sequence1:1232230..1232394(-)	frameshift,internal_stop_codon	1232194..1232196(-),1232474..1232476(-),1232082..1232084(-)	1232112,1232003,1232485,1232245,1232392,1232206	WP_003416843.1	alpha/beta hydrolase	92.6	22.3	54.0
MGA_1146	LOCUS_11450	sequence1:1234203..1234601(+)	frameshift,internal_stop_codon	1234600..1234602(+),1234618..1234620(+),1234025..1234027(+)	1233936,1234404,1234758,1234201,1234313	WP_003899967.1	ATP-dependent DNA helicase AdnA	97.7	12.3	58.8
MGA_1150	LOCUS_11490	sequence1:1235884..1236132(+)	frameshift,internal_stop_codon	1235760..1235762(+),1236230..1236232(+),1235919..1235921(+),1235724..1235726(+)	1236186,1235954,1236108,1236310	WP_003905015.1	ATP-dependent DNA helicase AdnA	56.1	4.4	73.9
MGA_1151	LOCUS_11500	sequence1:1236986..1237261(+)	frameshift,internal_stop_codon	1236773..1236775(+),1237551..1237553(+)	1236802,1237027,1237234,1236919,1237501	WP_003416833.1	ATP-dependent DNA helicase AdnB	73.6	6.1	68.7
MGA_1155	LOCUS_11540	sequence1:1240101..1240349(+)	frameshift,internal_stop_codon	1239982..1239984(+)	1239953,1240071	WP_003416831.1	potassium channel family protein	61.0	13.8	78.0
MGA_1157	LOCUS_11560	sequence1:1241425..1241736(-)	partial			WP_010907950.1	metalloregulator ArsR/SmtB family transcription factor	100.0	73.6	94.2
MGA_1161	LOCUS_11600	sequence1:1247307..1247489(+)	frameshift,internal_stop_codon	1247292..1247294(+)	1247512,1247540,1247366,1247144,1247487	WP_003911847.1	phospholipase C	65.0	7.5	64.1
MGA_1162	LOCUS_11610	sequence1:1249726..1249965(-)	frameshift,internal_stop_codon	1249682..1249684(-),1249513..1249515(-),1249992..1249994(-),1250128..1250130(-),1249579..1249581(-),1249965..1249967(-)	1250072,1250115,1249600,1249739	WP_003899282.1	TPM domain-containing protein	93.7	11.2	54.1
MGA_1163	LOCUS_11620	sequence1:1250128..1250337(-)	frameshift,internal_stop_codon	1250338..1250340(-),1249992..1249994(-),1250128..1250130(-),1249965..1249967(-)	1250504,1250072,1250476,1250118	WP_003899282.1	TPM domain-containing protein	100.0	11.1	60.3
MGA_1168	LOCUS_11670	sequence1:1255490..1255633(-)	frameshift,internal_stop_codon	1255489..1255491(-),1255746..1255748(-)	1255425,1255778,1255730,1255845,1255678	WP_010950697.1	NAD-dependent malic enzyme	100.0	8.6	66.0
MGA_1171	LOCUS_11700	sequence1:1257569..1257697(+)	frameshift,internal_stop_codon	1257535..1257537(+),1257695..1257697(+)	1257555,1257829	WP_013228779.1	S-methyl-5-thioribose-1-phosphate isomerase	100.0	12.8	66.7
MGA_1172	LOCUS_11710	sequence1:1257759..1258112(+)	internal_stop_codon	1258110..1258112(+)		WP_010907955.1	class II aldolase/adducin family protein	39.3	36.2	67.4
MGA_1173	LOCUS_11720	sequence1:1258116..1258352(+)	internal_stop_codon	1258110..1258112(+)		WP_010907955.1	class II aldolase/adducin family protein	100.0	61.4	83.3
MGA_1175	LOCUS_11740	sequence1:1259686..1260099(-)	frameshift		1260024,1260324,1259765	WP_010907956.1	serine O-acetyltransferase	63.5	38.3	90.8
MGA_1176	LOCUS_11750	sequence1:1260545..1260685(-)	frameshift,internal_stop_codon	1260545..1260547(-)	1260520,1260906,1260671	WP_010907957.1	cysteine synthase A	89.1	13.2	90.2
MGA_1181	LOCUS_11800	sequence1:1265967..1266305(+)	frameshift		1266264,1266033,1266292	WP_003411974.1	LppP/LprE family lipoprotein	86.6	53.7	64.9
MGA_1182	LOCUS_11810	sequence1:1266942..1267124(+)	frameshift		1267000,1267105,1266877	WP_010907961.1	nitrate/nitrite transporter	63.3	7.4	89.5
MGA_1183	LOCUS_11820	sequence1:1267138..1267875(+)	frameshift,internal_stop_codon	1267876..1267878(+)	1267105,1267593,1267529,1268055,1267000,1267962,1267995,1266877	WP_010907961.1	nitrate/nitrite transporter	100.0	48.2	71.5
MGA_1184	LOCUS_11830	sequence1:1268288..1268503(-)	frameshift,internal_stop_codon	1268288..1268290(-),1268261..1268263(-),1268156..1268158(-),1268645..1268647(-)	1268632,1268546,1268550,1268254	WP_010907962.1	acyl-CoA dehydrogenase	100.0	35.8	63.4
MGA_1185	LOCUS_11840	sequence1:1268859..1269296(-)	frameshift,internal_stop_codon	1269296..1269298(-)	1269536,1269415	WP_003408545.1	ATP transporter ATP-binding protein/permease	76.6	13.3	37.4
MGA_1189	LOCUS_11880	sequence1:1274803..1275111(+)	frameshift,internal_stop_codon	1274541..1274543(+)	1274769,1274833,1274996,1275096,1274715,1274636,1274718	WP_005111467.1	lipid-transfer protein	83.3	21.7	55.2
MGA_1190	LOCUS_11890	sequence1:1275314..1275643(-)	frameshift		1275904,1275602,1275832,1275562,1275756	WP_010950773.1	manganese-binding transcriptional regulator MntR	77.1	36.0	57.1
MGA_1206	LOCUS_12050	sequence1:1295469..1295768(-)	frameshift,internal_stop_codon	1295784..1295786(-)	1295968,1295648,1295600,1295850,1295503	WP_003411433.1	adenosylcobinamide-GDP ribazoletransferase	88.9	39.4	42.9
MGA_1224	LOCUS_12230	sequence1:1313889..1314089(-)	frameshift,internal_stop_codon	1313741..1313743(-),1313889..1313891(-)	1313761,1313846,1313879,1314280,1314159	WP_003901350.1	DEDD exonuclease domain-containing protein	84.8	8.7	69.6
MGA_1227	LOCUS_12260	sequence1:1316468..1316764(+)	frameshift,internal_stop_codon	1316762..1316764(+)	1316505,1316785,1316414	WP_003411371.1	hypothetical protein	86.7	33.1	60.0
MGA_1236	LOCUS_12350	sequence1:1323639..1324541(-)	partial			WP_010908002.1	glycosyltransferase 87 family protein	100.0	70.1	93.3
MGA_1243	LOCUS_12420	sequence1:1331245..1331523(-)	frameshift		1331584,1331313,1331669	WP_003411245.1	polyprenyl synthetase family protein	77.2	20.2	62.0
MGA_1266	LOCUS_12640	sequence1:1357204..1357437(+)	internal_stop_codon	1357435..1357437(+),1357516..1357518(+)		WP_003411130.1	hypothetical protein	77.9	50.8	61.7
MGA_1267	LOCUS_12650	sequence1:1358710..1358988(-)	partial			WP_003411466.1	RDD family protein	53.3	35.0	53.1
MGA_1272	LOCUS_12700	sequence1:1364559..1364816(+)	frameshift		1364362,1364557,1364453,1364526	WP_003899032.1	MgtC/SapB family protein	88.2	32.1	57.3
MGA_1275	LOCUS_12730	sequence1:1365708..1365971(-)	frameshift		1365746,1365683,1365957	WP_003916895.1	NAD(P)/FAD-dependent oxidoreductase	82.8	17.8	58.3
MGA_1277	LOCUS_12750	sequence1:1366758..1367051(+)	frameshift,internal_stop_codon	1366758..1366760(+),1367015..1367017(+)	1366754,1366596,1366820,1366890,1366974,1366488,1366684,1366718	WP_003901259.1	sterol desaturase family protein	73.2	24.7	60.3
MGA_1278	LOCUS_12760	sequence1:1368895..1369062(+)	frameshift,internal_stop_codon	1368701..1368703(+)	1368913,1368681,1368769,1368775	WP_003409205.1	TetR/AcrR family transcriptional regulator	85.5	20.1	66.0
MGA_1280	LOCUS_12780	sequence1:1370187..1370399(+)	frameshift,internal_stop_codon	1370113..1370115(+),1370578..1370580(+),1370125..1370127(+)	1370243,1370531,1370277,1370182,1370388,1370682,1370042,1370139,1370461	WP_003409207.1	FAD-binding protein	95.7	13.3	44.8
MGA_1285	LOCUS_12830	sequence1:1377941..1378153(+)	frameshift,internal_stop_codon	1378256..1378258(+),1378226..1378228(+),1378184..1378186(+)	1378424,1378141,1378366	WP_003898735.1	glucose-6-phosphate dehydrogenase	95.7	14.2	64.2
MGA_1286	LOCUS_12840	sequence1:1378622..1379050(+)	frameshift,internal_stop_codon	1379132..1379134(+),1379150..1379152(+),1378479..1378481(+),1378461..1378463(+),1379243..1379245(+)	1378368,1378689,1379233,1379203,1379176,1379101,1378608,1378611,1378906,1378423,1378714,1378589	WP_003898735.1	glucose-6-phosphate dehydrogenase	66.9	20.4	60.0
MGA_1288	LOCUS_12860	sequence1:1380647..1380847(-)	frameshift,internal_stop_codon	1380973..1380975(-),1380647..1380649(-),1380629..1380631(-)	1381042,1380534,1380839,1381079,1380571,1380924,1380429	WP_003405884.1	alpha/beta hydrolase	90.9	19.9	58.3
MGA_1290	LOCUS_12880	sequence1:1382671..1382898(-)	frameshift		1382529,1382418,1382412,1382703	WP_013225697.1	amidohydrolase family protein	81.3	16.2	62.3
MGA_1291	LOCUS_12890	sequence1:1383669..1384268(-)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	35.2	51.1	88.6
MGA_1293	LOCUS_12910	sequence1:1384945..1385100(+)	frameshift		1385000,1384833,1384990	WP_003405888.1	alpha/beta hydrolase	66.7	10.8	70.6
MGA_1294	LOCUS_12920	sequence1:1385120..1385419(+)	frameshift		1385617,1385491,1385437,1385407	WP_003900276.1	WS/DGAT domain-containing protein	98.0	23.4	54.6
MGA_1297	LOCUS_12950	sequence1:1388472..1388879(-)	frameshift,internal_stop_codon	1388978..1388980(-)	1389064,1388473,1388268	WP_197492548.1	pyruvate, phosphate dikinase	99.3	23.9	84.3
MGA_1301	LOCUS_12990	sequence1:1392255..1392461(+)	frameshift,internal_stop_codon	1392219..1392221(+),1392460..1392462(+)	1392312,1392560,1392287	WP_010950497.1	DUF3556 domain-containing protein	100.0	11.6	63.2
MGA_1304	LOCUS_13020	sequence1:1397962..1398147(+)	frameshift,internal_stop_codon	1397955..1397957(+),1397698..1397700(+)	1397794,1397772,1397812,1397839	WP_003898740.1	alpha-methylacyl-CoA racemase	96.7	18.3	52.2
MGA_1305	LOCUS_13030	sequence1:1398224..1398463(+)	frameshift,internal_stop_codon	1398485..1398487(+)	1398707,1398228,1398421,1398502	WP_003896585.1	3-hydroxyacyl-CoA dehydrogenase	75.9	23.7	56.7
MGA_1306	LOCUS_13040	sequence1:1398488..1398727(+)	frameshift,internal_stop_codon	1398485..1398487(+)	1398867,1398707,1398228,1398502,1398424	WP_003405961.1	3-hydroxyacyl-CoA dehydrogenase	88.6	26.4	64.3
MGA_1308	LOCUS_13060	sequence1:1400342..1400629(+)	frameshift,internal_stop_codon	1400287..1400289(+),1400079..1400081(+),1400305..1400307(+),1400630..1400632(+),1400173..1400175(+)	1400836,1400244,1400117,1400316,1400906,1400491,1400460	WP_003405970.1	MMPL family transporter	100.0	12.0	62.2
MGA_1311	LOCUS_13090	sequence1:1402243..1402461(+)	frameshift,internal_stop_codon	1402062..1402064(+)	1402217	WP_011730363.1	TetR/AcrR family transcriptional regulator	98.6	29.7	50.7
MGA_1315	LOCUS_13130	sequence1:1406332..1406529(+)	frameshift,internal_stop_codon	1406100..1406102(+),1406188..1406190(+)	1406708,1406132,1406662,1406199,1406523,1406263,1406095	WP_003406215.1	alpha/beta hydrolase	84.6	18.1	67.3
MGA_1325	LOCUS_13230	sequence1:1415618..1415953(-)	frameshift,internal_stop_codon	1416006..1416008(-)	1415870	WP_003406236.1	hypothetical protein	75.7	43.3	56.0
MGA_1330	LOCUS_13280	sequence1:1419928..1420128(+)	frameshift,internal_stop_codon	1419910..1419912(+)	1419884,1419844	WP_005074247.1	long-chain-acyl-CoA synthetase FadD6	69.7	7.9	63.8
MGA_1335	LOCUS_13330	sequence1:1423277..1423444(+)	internal_stop_codon	1423232..1423234(+)		WP_003900293.1	DUF3117 domain-containing protein	100.0	73.3	98.2
MGA_1336	LOCUS_13340	sequence1:1423895..1424191(-)	frameshift		1423672	WP_003406248.1	glycogen synthase	98.0	24.0	70.8
MGA_1339	LOCUS_13370	sequence1:1426364..1426576(-)	frameshift,internal_stop_codon	1426580..1426582(-),1426363..1426365(-)	1426476,1426755,1426516,1426718	WP_003406252.1	isoprenylcysteine carboxylmethyltransferase family protein	94.3	29.9	52.1
MGA_1341	LOCUS_13390	sequence1:1426988..1427332(-)	internal_stop_codon	1427372..1427374(-),1426988..1426990(-),1427354..1427356(-)		WP_003898775.1	multidrug efflux ABC transporter permease	93.0	19.5	56.1
MGA_1351	LOCUS_13490	sequence1:1437342..1437617(-)	frameshift,internal_stop_codon	1437677..1437679(-),1437342..1437344(-)	1437408,1437221,1437097,1437815,1437591,1437625,1437466,1437500,1437245	WP_010950506.1	lytic transglycosylase domain-containing protein	85.7	18.7	44.9
MGA_1353	LOCUS_13510	sequence1:1438910..1439269(-)	partial			WP_010908911.1	heparin-binding hemagglutinin HbhA	56.3	35.6	85.1
MGA_1354	LOCUS_13520	sequence1:1440218..1440436(-)	partial			WP_010950507.1	DUF4190 domain-containing protein	95.8	34.8	66.7
MGA_1363	LOCUS_13610	sequence1:1450421..1450786(+)	frameshift		1450362,1450310,1450759	WP_005074294.1	NADP-dependent malic enzyme	89.3	28.2	53.7
MGA_1364	LOCUS_13620	sequence1:1450764..1451108(+)	frameshift		1450759	WP_014878221.1	NADP-dependent malic enzyme	98.2	29.0	60.2
MGA_1372	LOCUS_13700	sequence1:1463337..1463678(-)	partial			WP_010908129.1	LppP/LprE family lipoprotein	100.0	55.9	94.7
MGA_1374	LOCUS_13720	sequence1:1464196..1464456(+)	frameshift,internal_stop_codon	1464455..1464457(+)	1464586,1464259,1464204	WP_003896448.1	DEAD/DEAH box helicase	77.9	11.5	70.1
MGA_1375	LOCUS_13730	sequence1:1464600..1465148(+)	frameshift,internal_stop_codon	1464454..1464456(+)	1464585,1465137	WP_003898793.1	DEAD/DEAH box helicase	98.4	31.8	69.3
MGA_1376	LOCUS_13740	sequence1:1465138..1465560(+)	frameshift		1465136	WP_003406344.1	DEAD/DEAH box helicase	98.6	22.9	54.3
MGA_1381	LOCUS_13790	sequence1:1470176..1470577(-)	frameshift		1470560,1470180,1470669,1470262	WP_049769938.1	FAD-linked oxidase C-terminal domain-containing protein	74.4	22.6	83.8
MGA_1382	LOCUS_13800	sequence1:1470631..1470996(-)	frameshift		1471000,1470560,1470669	WP_049769938.1	FAD-linked oxidase C-terminal domain-containing protein	90.1	24.8	86.2
MGA_1386	LOCUS_13840	sequence1:1474490..1474624(-)	frameshift,internal_stop_codon	1474660..1474662(-)	1474638	WP_003406366.1	HIT family protein	100.0	30.6	72.7
MGA_1388	LOCUS_13860	sequence1:1477605..1477772(+)	frameshift,internal_stop_codon	1477570..1477572(+),1477506..1477508(+),1477771..1477773(+)	1477974,1477514,1477411,1477566	WP_010950513.1	adenylate cyclase	100.0	13.9	72.7
MGA_1394	LOCUS_13920	sequence1:1484801..1485022(-)	frameshift,internal_stop_codon	1485025..1485027(-)	1484765,1485249,1484787,1484805	WP_003906521.1	HNH endonuclease signature motif containing protein	98.6	15.5	54.2
MGA_1408	LOCUS_14060	sequence1:1496854..1497099(+)	frameshift,internal_stop_codon	1497098..1497100(+)	1497003,1497036	WP_003406616.1	beta-carbonic anhydrase CanA	100.0	49.7	58.0
MGA_1409	LOCUS_14070	sequence1:1497130..1497342(+)	frameshift,internal_stop_codon	1497098..1497100(+)	1497003,1497036	WP_003406616.1	beta-carbonic anhydrase CanA	98.6	42.9	64.3
MGA_1410	LOCUS_14080	sequence1:1497701..1497862(-)	frameshift,internal_stop_codon	1497647..1497649(-),1497914..1497916(-)	1497715	WP_005098517.1	PaaI family thioesterase	92.5	30.7	51.0
MGA_1411	LOCUS_14090	sequence1:1498431..1498688(+)	frameshift,internal_stop_codon	1498863..1498865(+),1498743..1498745(+),1498197..1498199(+)	1498356,1498431,1498651,1498235,1498892,1498383	WP_003911471.1	sulfate adenylyltransferase subunit CysD	85.9	23.6	74.0
MGA_1412	LOCUS_14100	sequence1:1498874..1499272(+)	frameshift,internal_stop_codon	1499544..1499546(+),1499413..1499415(+),1499538..1499540(+)	1499239,1499338,1499387,1499290,1499482,1499439	WP_010950517.1	adenylyl-sulfate kinase	38.6	8.8	70.4
MGA_1438	LOCUS_14360	sequence1:1531119..1531517(-)	frameshift,internal_stop_codon	1530942..1530944(-),1530996..1530998(-)	1531617,1531074,1531044,1531720,1531119,1531152,1531733,1531574,1530935,1531225,1531677	WP_003900313.1	bifunctional regulatory protein/DNA repair enzyme AlkA	84.8	22.0	53.6
MGA_1440	LOCUS_14380	sequence1:1532529..1532837(+)	frameshift,internal_stop_codon	1532977..1532979(+),1532452..1532454(+),1532836..1532838(+),1532926..1532928(+),1532890..1532892(+)	1532865,1532743,1532423,1532904,1532937,1532264,1532652,1532307,1532532,1532798,1533087	WP_003901784.1	FAD-binding oxidoreductase	42.2	9.0	69.8
MGA_1441	LOCUS_14390	sequence1:1533566..1533754(-)	frameshift,internal_stop_codon	1533342..1533344(-),1533786..1533788(-),1533996..1533998(-),1533489..1533491(-)	1533528,1533577,1533371,1533740	WP_003898821.1	adenylate/guanylate cyclase domain-containing protein	88.7	9.7	65.5
MGA_1452	LOCUS_14500	sequence1:1541157..1541549(-)	frameshift		1541538,1540900,1541001,1541101,1541294,1540991,1540890,1541119	WP_003900661.1	MFS transporter	91.5	12.1	40.2
MGA_1454	LOCUS_14520	sequence1:1543606..1543893(-)	frameshift		1544129,1543417,1544010,1544107,1543371,1543670,1543513,1543579,1543902	WP_010950526.1	nicotinate phosphoribosyltransferase	78.9	16.7	61.3
MGA_1455	LOCUS_14530	sequence1:1544127..1544288(-)	frameshift,internal_stop_codon	1544292..1544294(-),1544313..1544315(-)	1544129,1544341,1544010,1544107,1543902,1544319	WP_010950526.1	nicotinate phosphoribosyltransferase	92.5	11.2	68.0
MGA_1456	LOCUS_14540	sequence1:1544591..1544803(+)	partial			WP_003406906.1	ATP-dependent Clp protease adapter ClpS	100.0	69.3	95.7
MGA_1459	LOCUS_14570	sequence1:1547331..1547501(+)	frameshift,internal_stop_codon	1547616..1547618(+),1547283..1547285(+),1547232..1547234(+)	1547489,1547521,1547666,1547496,1547578	WP_003406912.1	O-phosphoserine sulfhydrylase	98.2	17.0	69.1
MGA_1460	LOCUS_14580	sequence1:1547731..1547919(+)	frameshift,internal_stop_codon	1547919..1547921(+),1547616..1547618(+)	1547489,1547521,1547666,1547496,1547578,1548095	WP_005084687.1	cysteine synthase	100.0	19.1	71.0
MGA_1470	LOCUS_14680	sequence1:1554984..1555190(+)	frameshift,internal_stop_codon	1554968..1554970(+),1554899..1554901(+),1554811..1554813(+)	1554804,1554973,1554855	WP_003406963.1	3-oxoacyl-ACP reductase FabG	95.6	26.3	58.5
MGA_1472	LOCUS_14700	sequence1:1557097..1557591(+)	frameshift,internal_stop_codon	1557560..1557562(+),1556925..1556927(+)	1557632,1557116,1556933,1557589,1556876,1557501,1557086	WP_011728223.1	acyl-CoA dehydrogenase family protein	89.0	35.5	58.2
MGA_1473	LOCUS_14710	sequence1:1557625..1557879(+)	frameshift,internal_stop_codon	1557557..1557559(+)	1557498,1557629,1557586	WP_011728223.1	acyl-CoA dehydrogenase family protein	85.7	18.1	70.8
MGA_1476	LOCUS_14740	sequence1:1559052..1559273(+)	frameshift,internal_stop_codon	1559302..1559304(+),1559422..1559424(+),1559500..1559502(+)	1559032,1559544,1559013,1559270	WP_011728239.1	acyl-CoA dehydrogenase family protein	93.2	20.1	52.9
MGA_1478	LOCUS_14760	sequence1:1560269..1560448(+)	frameshift,internal_stop_codon	1560533..1560535(+),1560447..1560449(+)	1560547,1560516,1560118,1560488,1560221	WP_011728240.1	acyl-CoA dehydrogenase family protein	100.0	14.9	61.0
MGA_1491	LOCUS_14890	sequence1:1580421..1580732(+)	frameshift		1580711	WP_010908191.1	dipeptidase	97.1	22.6	90.0
MGA_1492	LOCUS_14900	sequence1:1580711..1581715(+)	frameshift		1580711	WP_010908191.1	dipeptidase	95.8	72.4	84.1
MGA_1498	LOCUS_14960	sequence1:1589045..1589317(+)	frameshift,internal_stop_codon	1588859..1588861(+),1589349..1589351(+),1589316..1589318(+)	1589028,1588845,1589357,1588815,1589520,1588915,1589590,1589015,1589113	WP_003904641.1	DNA polymerase IV	74.4	14.5	70.1
MGA_1502	LOCUS_15000	sequence1:1592534..1592731(-)	frameshift,internal_stop_codon	1592940..1592942(-)	1592837	WP_011030011.1	class I SAM-dependent methyltransferase	66.2	15.8	65.1
MGA_1503	LOCUS_15010	sequence1:1592940..1593182(-)	frameshift,internal_stop_codon	1593273..1593275(-),1592939..1592941(-),1593294..1593296(-)	1593260,1592830,1593215	WP_003898940.1	methyltransferase domain-containing protein	100.0	31.7	56.2
MGA_1505	LOCUS_15030	sequence1:1595532..1595690(+)	frameshift,internal_stop_codon	1595689..1595691(+),1595722..1595724(+),1595707..1595709(+),1595324..1595326(+),1595858..1595860(+),1595339..1595341(+),1595351..1595353(+),1595521..1595523(+),1595342..1595344(+),1595885..1595887(+)	1595453,1595431,1595323,1595917,1595775	WP_003407734.1	SDR family NAD(P)-dependent oxidoreductase	94.2	14.4	77.6
MGA_1512	LOCUS_15100	sequence1:1607704..1607892(-)	frameshift,internal_stop_codon	1607448..1607450(-),1608057..1608059(-),1607572..1607574(-),1607898..1607900(-)	1607441,1608011,1607484,1607741,1607647	WP_036462534.1	glycogen debranching protein GlgX	82.3	7.2	78.4
MGA_1513	LOCUS_15110	sequence1:1608319..1608501(-)	frameshift,internal_stop_codon	1608053..1608055(-),1608727..1608729(-),1608764..1608766(-),1608209..1608211(-)	1608672,1608385,1608193,1608754,1608702,1608558,1608527	WP_003898930.1	glycogen debranching protein GlgX	76.7	6.4	56.5
MGA_1516	LOCUS_15140	sequence1:1612332..1612532(-)	frameshift		1612462,1612550	WP_003407802.1	hypothetical protein	62.1	43.6	56.1
MGA_1520	LOCUS_15180	sequence1:1616398..1616580(+)	frameshift		1616414	WP_003407809.1	2'-5' RNA ligase family protein	96.7	33.7	74.1
MGA_1525	LOCUS_15230	sequence1:1619680..1619940(-)	frameshift,internal_stop_codon	1619649..1619651(-),1619542..1619544(-)	1619584,1619681,1619763,1619591,1619721,1620010,1619502	WP_003407926.1	lipase family protein	100.0	20.4	52.7
MGA_1531	LOCUS_15290	sequence1:1627734..1628009(+)	frameshift,internal_stop_codon	1627473..1627475(+),1627638..1627640(+),1628066..1628068(+)	1627973,1628013	WP_003899248.1	alpha/beta hydrolase	84.6	17.9	44.2
MGA_1540	LOCUS_15380	sequence1:1644960..1645172(-)	frameshift		1645392,1644884,1645334,1645337,1645166	WP_003408257.1	ATP-binding cassette domain-containing protein	91.4	14.7	51.7
MGA_1542	LOCUS_15400	sequence1:1649780..1650055(+)	frameshift,internal_stop_codon	1649757..1649759(+),1649832..1649834(+)	1649696,1649666,1649795,1650006,1649849,1649951	WP_010908218.1	hypothetical protein	37.4	22.9	77.1
MGA_1546	LOCUS_15440	sequence1:1656226..1656504(+)	partial			WP_003412710.1	single-stranded DNA-binding protein	47.8	27.3	86.4
MGA_1549	LOCUS_15470	sequence1:1665313..1665468(-)	frameshift,internal_stop_codon	1665128..1665130(-),1665177..1665179(-)	1665339,1665167	WP_010950723.1	glycoside hydrolase family 13 protein	84.3	7.9	58.1
MGA_1555	LOCUS_15530	sequence1:1673289..1673414(+)	frameshift,internal_stop_codon	1673593..1673595(+),1673415..1673417(+)	1673574,1673640,1673291,1673261,1673230,1673264,1673208,1673471	WP_003899540.1	ammonium transporter	100.0	8.4	73.2
MGA_1556	LOCUS_15540	sequence1:1673775..1673942(+)	frameshift,internal_stop_codon	1673590..1673592(+),1673714..1673716(+)	1673571,1673964,1673637,1674184,1673740,1673933	WP_003899540.1	ammonium transporter	85.5	9.9	68.1
MGA_1557	LOCUS_15550	sequence1:1673963..1674217(+)	frameshift,internal_stop_codon	1673714..1673716(+)	1674184,1673740,1673933,1673964	WP_003899540.1	ammonium transporter	86.9	15.3	72.6
MGA_1558	LOCUS_15560	sequence1:1674609..1674836(+)	frameshift,internal_stop_codon	1674844..1674846(+)	1675099,1674755,1675045,1674646	WP_010950798.1	[protein-PII] uridylyltransferase	48.0	4.5	69.4
MGA_1559	LOCUS_15570	sequence1:1674884..1675342(+)	frameshift,internal_stop_codon	1674844..1674846(+)	1675392,1675362,1675459,1675523,1674755,1675048,1675310,1674646,1675099	WP_003899539.1	[protein-PII] uridylyltransferase	91.4	17.0	52.5
MGA_1565	LOCUS_15630	sequence1:1681837..1682082(+)	frameshift,internal_stop_codon	1682291..1682293(+)	1682160,1682034,1682332,1682061	WP_003899537.1	amidohydrolase family protein	81.5	17.8	63.6
MGA_1566	LOCUS_15640	sequence1:1682079..1682291(+)	frameshift,internal_stop_codon	1682291..1682293(+)	1682064,1682034,1682166,1682375,1682335	WP_003899537.1	amidohydrolase family protein	58.6	11.1	70.7
MGA_1567	LOCUS_15650	sequence1:1682357..1682638(+)	frameshift,internal_stop_codon	1682289..1682291(+)	1682800,1682642,1682164,1682373,1682581,1682730,1682333	WP_003899537.1	amidohydrolase family protein	87.1	21.6	72.8
MGA_1575	LOCUS_15730	sequence1:1687394..1687771(-)	frameshift,internal_stop_codon	1687711..1687713(-)	1687778,1687717,1687653,1687815,1687397,1687544,1687581	WP_003414720.1	hypothetical protein	99.2	40.1	53.2
MGA_1581	LOCUS_15790	sequence1:1691259..1691483(+)	frameshift,internal_stop_codon	1691694..1691696(+),1691482..1691484(+),1691650..1691652(+),1691199..1691201(+),1691638..1691640(+)	1691664,1691370,1691671	WP_003899532.1	FdhF/YdeP family oxidoreductase	51.4	4.9	78.9
MGA_1582	LOCUS_15800	sequence1:1691487..1691639(+)	frameshift,internal_stop_codon	1691694..1691696(+),1691482..1691484(+),1691650..1691652(+),1691199..1691201(+),1691638..1691640(+)	1691664,1691921,1691671,1691370,1691804,1691837	WP_003899532.1	FdhF/YdeP family oxidoreductase	96.0	6.2	75.0
MGA_1584	LOCUS_15820	sequence1:1692287..1692583(+)	frameshift,internal_stop_codon	1692645..1692647(+),1692581..1692583(+),1692660..1692662(+)	1692695,1692631	WP_003414705.1	formate dehydrogenase accessory sulfurtransferase FdhD	75.5	26.8	58.1
MGA_1592	LOCUS_15900	sequence1:1698942..1699130(+)	frameshift,internal_stop_codon	1699251..1699253(+),1699128..1699130(+)	1699355	WP_011815500.1	carbamoyltransferase C-terminal domain-containing protein	90.3	10.0	54.4
MGA_1598	LOCUS_15960	sequence1:1705772..1706209(+)	frameshift,internal_stop_codon	1705677..1705679(+),1705557..1705559(+),1705674..1705676(+),1706277..1706279(+)	1705920,1706264,1705538,1706378,1705972,1706200,1705721,1705535	WP_003403977.1	MFS transporter	99.3	26.3	44.8
MGA_1606	LOCUS_16040	sequence1:1711337..1711615(+)	frameshift,internal_stop_codon	1711763..1711765(+),1711754..1711756(+),1711866..1711868(+),1711842..1711844(+),1711851..1711853(+)	1711656,1711607,1711780,1711519	WP_003414658.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	45.7	11.5	69.0
MGA_1607	LOCUS_16050	sequence1:1711896..1712117(+)	frameshift,internal_stop_codon	1711657..1711659(+),1711763..1711765(+),1711754..1711756(+),1711866..1711868(+),1711842..1711844(+),1711851..1711853(+),1712092..1712094(+)	1712352,1712078,1711662,1711783	WP_011728422.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	83.6	16.9	76.2
MGA_1621	LOCUS_16190	sequence1:1727505..1727771(-)	frameshift,internal_stop_codon	1727793..1727795(-),1727601..1727603(-),1727658..1727660(-)	1727876,1727818,1727594,1727954,1727987,1727927,1727672,1727802	WP_003414559.1	HoxN/HupN/NixA family nickel/cobalt transporter	100.0	23.7	39.2
MGA_1622	LOCUS_16200	sequence1:1728142..1728426(-)	frameshift		1727953,1728114,1727875,1727986,1727926,1728089,1728159	WP_003414559.1	HoxN/HupN/NixA family nickel/cobalt transporter	94.7	24.2	64.4
MGA_1623	LOCUS_16210	sequence1:1728857..1729051(-)	frameshift,internal_stop_codon	1728856..1728858(-),1728643..1728645(-)	1729220,1728807,1728600,1728621,1729006,1729135	WP_003414557.1	mycothione reductase	70.3	9.8	62.2
MGA_1625	LOCUS_16230	sequence1:1731018..1731293(+)	frameshift,internal_stop_codon	1731291..1731293(+),1731375..1731377(+)	1731458	WP_011728474.1	magnesium chelatase subunit D family protein	75.8	11.0	62.3
MGA_1626	LOCUS_16240	sequence1:1732626..1732913(+)	frameshift,internal_stop_codon	1732489..1732491(+),1732954..1732956(+),1733024..1733026(+)	1732844,1732548,1733013,1732630	WP_003414539.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	75.8	34.8	68.1
MGA_1627	LOCUS_16250	sequence1:1733658..1734008(+)	frameshift,internal_stop_codon	1734018..1734020(+),1734006..1734008(+),1733652..1733654(+)	1733393,1734104,1734236,1733514,1734140,1733530	WP_003899509.1	cobyrinate a,c-diamide synthase	100.0	25.8	56.8
MGA_1628	LOCUS_16260	sequence1:1734490..1734648(+)	frameshift		1734633,1734723,1734772	WP_003893999.1	uroporphyrinogen-III C-methyltransferase	88.5	11.7	61.7
MGA_1633	LOCUS_16310	sequence1:1738381..1738788(+)	frameshift,internal_stop_codon	1738857..1738859(+)	1738780,1738701	WP_003899507.1	ribosome maturation factor RimP	79.3	60.1	52.7
MGA_1648	LOCUS_16460	sequence1:1753045..1753380(-)	partial			WP_010908366.1	aminopeptidase N	100.0	12.9	88.3
MGA_1654	LOCUS_16520	sequence1:1759089..1759748(+)	frameshift		1759011	WP_003911572.1	inositol monophosphatase family protein	97.3	78.9	55.4
MGA_1668	LOCUS_16660	sequence1:1770521..1770733(+)	partial			WP_010908241.1	hypothetical protein	70.0	65.4	80.4
MGA_1669	LOCUS_16670	sequence1:1770970..1771290(+)	partial			WP_003408004.1	TM2 domain-containing protein	99.1	71.9	61.0
MGA_1676	LOCUS_16740	sequence1:1777193..1777594(-)	frameshift,internal_stop_codon	1777197..1777199(-),1777666..1777668(-),1777227..1777229(-),1777332..1777334(-),1777341..1777343(-),1776917..1776919(-)	1777816,1777377,1777076,1777632	WP_003908715.1	thiol reductant ABC exporter subunit CydC	54.1	12.5	61.1
MGA_1677	LOCUS_16750	sequence1:1777899..1778186(-)	frameshift,internal_stop_codon	1777666..1777668(-)	1777816,1777635,1777919	WP_003908715.1	thiol reductant ABC exporter subunit CydC	62.1	10.2	81.4
MGA_1678	LOCUS_16760	sequence1:1778222..1778425(-)	frameshift,internal_stop_codon	1778221..1778223(-),1778527..1778529(-)	1778532	WP_003408022.1	thiol reductant ABC exporter subunit CydD	95.5	12.1	62.5
MGA_1679	LOCUS_16770	sequence1:1778978..1779109(-)	frameshift,internal_stop_codon	1778977..1778979(-)	1779225,1778838,1778718	WP_003408022.1	thiol reductant ABC exporter subunit CydD	100.0	8.2	74.4
MGA_1680	LOCUS_16780	sequence1:1779175..1779393(-)	frameshift,internal_stop_codon	1778977..1778979(-)	1779225,1779406	WP_003408022.1	thiol reductant ABC exporter subunit CydD	77.8	10.6	67.9
MGA_1684	LOCUS_16820	sequence1:1780524..1780697(-)	frameshift,internal_stop_codon	1780230..1780232(-),1780524..1780526(-)	1780412,1780852,1780788	WP_003408024.1	cytochrome d ubiquinol oxidase subunit II	100.0	16.5	80.7
MGA_1685	LOCUS_16830	sequence1:1781061..1781225(-)	frameshift,internal_stop_codon	1781286..1781288(-),1781054..1781056(-),1781322..1781324(-),1781030..1781032(-),1781060..1781062(-)	1781210,1781188	WP_003408027.1	cytochrome ubiquinol oxidase subunit I	100.0	11.3	63.6
MGA_1686	LOCUS_16840	sequence1:1781322..1781531(-)	frameshift,internal_stop_codon	1781786..1781788(-),1781610..1781612(-),1781286..1781288(-),1781322..1781324(-),1781054..1781056(-),1781030..1781032(-),1781060..1781062(-)	1781728,1781210,1781188,1781700	WP_003408027.1	cytochrome ubiquinol oxidase subunit I	75.4	10.7	71.2
MGA_1687	LOCUS_16850	sequence1:1781786..1782055(-)	frameshift,internal_stop_codon	1782302..1782304(-),1781609..1781611(-),1781785..1781787(-)	1782032,1782065,1781699,1782102,1782280,1782028,1781727	WP_003408027.1	cytochrome ubiquinol oxidase subunit I	89.9	16.5	73.8
MGA_1688	LOCUS_16860	sequence1:1782751..1782945(-)	frameshift,internal_stop_codon	1782750..1782752(-)	1783041,1782597,1782746,1782939,1782734,1782682	WP_003408035.1	adenylate cyclase	100.0	14.4	54.7
MGA_1689	LOCUS_16870	sequence1:1783024..1783212(-)	frameshift,internal_stop_codon	1782748..1782750(-)	1783364,1783220,1782744,1783400,1782937,1782732,1783039	WP_003408035.1	adenylate cyclase	93.5	13.1	65.5
MGA_1691	LOCUS_16890	sequence1:1784812..1785006(-)	frameshift,internal_stop_codon	1785078..1785080(-),1784810..1784812(-)	1784999,1785026,1785236,1785279	WP_003408054.1	lipid-transfer protein	96.9	15.4	74.2
MGA_1693	LOCUS_16910	sequence1:1787101..1787256(-)	frameshift		1787326,1787263	WP_003411129.1	phosphoribosyltransferase family protein	96.1	13.9	63.3
MGA_1706	LOCUS_17040	sequence1:1803372..1803527(+)	frameshift,internal_stop_codon	1803615..1803617(+),1803527..1803529(+),1803248..1803250(+)	1803568,1803298,1803735,1803674,1803644,1803358	WP_003411086.1	SDR family oxidoreductase	100.0	16.7	72.5
MGA_1717	LOCUS_17150	sequence1:1816421..1816600(+)	frameshift,internal_stop_codon	1816613..1816615(+),1816655..1816657(+)	1816440,1816265,1816594,1816738	WP_012061566.1	FAD-containing oxidoreductase	86.4	12.2	64.3
MGA_1722	LOCUS_17200	sequence1:1819188..1819673(-)	partial			WP_010908267.1	lipoprotein	83.9	69.6	91.9
MGA_1724	LOCUS_17220	sequence1:1822108..1822278(-)	frameshift,internal_stop_codon	1822106..1822108(-),1822404..1822406(-),1822443..1822445(-)	1822321,1822274,1822311,1822361,1822027,1822487,1822255	WP_003411033.1	hypothetical protein	71.4	19.3	72.5
MGA_1742	LOCUS_17390	sequence1:1844725..1844889(-)	frameshift,internal_stop_codon	1844933..1844935(-),1844927..1844929(-)	1844954,1845042,1844911	WP_003895205.1	ABC transporter ATP-binding protein	92.6	19.7	60.0
MGA_1747	LOCUS_17440	sequence1:1851026..1851214(+)	frameshift,internal_stop_codon	1850904..1850906(+),1851006..1851008(+),1850991..1850993(+)	1850853,1850924,1850813,1850881	WP_005079304.1	tetratricopeptide repeat protein	87.1	25.6	59.3
MGA_1764	LOCUS_17610	sequence1:1870383..1870703(+)	frameshift,internal_stop_codon	1870995..1870997(+)	1870652	WP_003408460.1	IclR family transcriptional regulator	84.9	40.2	53.8
MGA_1765	LOCUS_17620	sequence1:1870781..1870996(+)	frameshift,internal_stop_codon	1870995..1870997(+)	1871012,1870652	WP_003408460.1	IclR family transcriptional regulator	98.6	27.0	54.3
MGA_1772	LOCUS_17690	sequence1:1875776..1875949(+)	frameshift,internal_stop_codon	1875962..1875964(+),1875547..1875549(+)	1875633,1875919	WP_003904700.1	amino acid deaminase/aldolase	84.2	11.6	68.8
MGA_1774	LOCUS_17710	sequence1:1878187..1878435(+)	frameshift,internal_stop_codon	1878148..1878150(+),1878434..1878436(+)	1878180,1878020,1877940,1878056,1877977,1878508	WP_003408749.1	L-gulono-1,4-lactone dehydrogenase	98.8	18.7	58.0
MGA_1781	LOCUS_17780	sequence1:1892256..1892411(+)	frameshift,internal_stop_codon	1892409..1892411(+)	1892672,1892537,1892290,1892676	WP_003408079.1	MFS transporter	94.1	10.2	58.3
MGA_1782	LOCUS_17790	sequence1:1893187..1893579(+)	frameshift,internal_stop_codon	1893122..1893124(+),1892983..1892985(+)	1893157,1893095,1893067,1893422,1893136,1893042,1893108,1893178,1893374	WP_003898954.1	MFS transporter	99.2	31.2	51.7
MGA_1783	LOCUS_17800	sequence1:1893568..1894665(-)	partial			WP_010908308.1	glycosyltransferase family 39 protein	100.0	69.3	81.9
MGA_1791	LOCUS_17880	sequence1:1904503..1904934(+)	partial			WP_081439339.1	translation initiation factor IF-3	100.0	70.8	91.6
MGA_1795	LOCUS_17920	sequence1:1907202..1907402(-)	frameshift		1907080,1907234,1907195,1907454	WP_003408141.1	oxygenase MpaB family protein	83.3	16.5	72.4
MGA_1796	LOCUS_17930	sequence1:1908130..1908573(+)	frameshift		1908528,1908161,1908592,1908024,1908088,1908685	WP_010908317.1	adenylate cyclase	83.0	37.7	91.8
MGA_1799	LOCUS_17960	sequence1:1913287..1913508(+)	frameshift		1913708	WP_003411972.1	PE family protein	95.9	25.9	38.4
MGA_1800	LOCUS_17970	sequence1:1914648..1914932(-)	frameshift		1915004,1914736,1915020,1914934	WP_011727856.1	IS256 family transposase	69.1	14.4	66.2
MGA_1809	LOCUS_18060	sequence1:1925532..1925777(+)	frameshift,internal_stop_codon	1925775..1925777(+)	1926001,1925946	WP_003408181.1	type III polyketide synthase	98.8	22.4	70.0
MGA_1813	LOCUS_18100	sequence1:1930877..1931278(-)	frameshift,internal_stop_codon	1931334..1931336(-)	1930882,1930724,1930613,1931303,1930842	WP_003899463.1	class I SAM-dependent methyltransferase	97.7	42.9	70.8
MGA_1821	LOCUS_18180	sequence1:1937897..1938271(+)	frameshift,internal_stop_codon	1938467..1938469(+),1938269..1938271(+),1938518..1938520(+),1938503..1938505(+),1938308..1938310(+)	1938427	WP_003414026.1	hypothetical protein	100.0	45.6	62.9
MGA_1822	LOCUS_18190	sequence1:1938574..1938747(+)	frameshift,internal_stop_codon	1938467..1938469(+),1938308..1938310(+),1938503..1938505(+),1938518..1938520(+)	1938427	WP_003414026.1	hypothetical protein	100.0	19.3	54.4
MGA_1829	LOCUS_18260	sequence1:1945420..1945941(+)	internal_stop_codon	1945939..1945941(+)		WP_010908059.1	hypothetical protein	100.0	82.8	80.9
MGA_1839	LOCUS_18360	sequence1:1954839..1955078(+)	frameshift,internal_stop_codon	1954685..1954687(+),1955076..1955078(+)	1955177,1954828,1955205	WP_010950764.1	acyl-CoA dehydrogenase family protein	100.0	20.5	65.8
MGA_1845	LOCUS_18420	sequence1:1963306..1963659(+)	partial			WP_010908067.1	LysM peptidoglycan-binding domain-containing protein	100.0	71.3	87.2
MGA_1848	LOCUS_18450	sequence1:1965580..1965861(-)	frameshift,internal_stop_codon	1965868..1965870(-),1966087..1966089(-)	1966074,1965861	WP_003900558.1	alpha/beta hydrolase	100.0	27.3	64.5
MGA_1849	LOCUS_18460	sequence1:1965869..1966180(-)	frameshift,internal_stop_codon	1966084..1966086(-),1965865..1965867(-)	1966274,1965858,1966342,1966278,1966346,1966192,1966164,1966071,1966457,1966302	WP_003900558.1	alpha/beta hydrolase	64.1	19.4	77.3
MGA_1852	LOCUS_18490	sequence1:1968775..1969038(-)	frameshift,internal_stop_codon	1968774..1968776(-),1969173..1969175(-)	1969042,1968828,1969070,1968791	WP_003900556.1	Si-specific NAD(P)(+) transhydrogenase	80.5	15.0	64.3
MGA_1853	LOCUS_18500	sequence1:1969173..1969463(-)	frameshift,internal_stop_codon	1969172..1969174(-)	1969509,1969560,1969469,1969708,1969069,1969053	WP_003900556.1	Si-specific NAD(P)(+) transhydrogenase	100.0	20.5	71.9
MGA_1858	LOCUS_18550	sequence1:1973208..1973537(-)	frameshift,internal_stop_codon	1973207..1973209(-)	1973563	WP_010908075.1	DUF3099 domain-containing protein	99.1	77.7	74.1
MGA_1860	LOCUS_18570	sequence1:1973929..1974756(-)	frameshift,internal_stop_codon	1973941..1973943(-)	1973988	WP_010908077.1	YihY/virulence factor BrkB family protein	91.6	76.4	89.7
MGA_1873	LOCUS_18700	sequence1:1985350..1985610(-)	frameshift,internal_stop_codon	1985619..1985621(-)	1985848,1985625,1985701	WP_003894154.1	TrkA family potassium uptake protein	90.7	35.1	74.4
MGA_1875	LOCUS_18720	sequence1:1987165..1987503(+)	frameshift,internal_stop_codon	1987519..1987521(+)	1987057,1987475,1987641,1987198,1987054	WP_181825004.1	APC family permease	83.0	13.9	71.0
MGA_1876	LOCUS_18730	sequence1:1987696..1987968(+)	frameshift,internal_stop_codon	1987517..1987519(+),1987967..1987969(+)	1988059,1987476,1987639	WP_005093687.1	APC family permease	100.0	13.6	67.8
MGA_1877	LOCUS_18740	sequence1:1988091..1988339(+)	frameshift,internal_stop_codon	1987966..1987968(+)	1988058,1988316,1988589	WP_005093687.1	APC family permease	91.5	11.3	80.0
MGA_1878	LOCUS_18750	sequence1:1988318..1988590(+)	frameshift		1988034,1988316,1988589,1988644	WP_181825004.1	APC family permease	100.0	13.5	70.0
MGA_1879	LOCUS_18760	sequence1:1988683..1988895(+)	frameshift		1988642,1988587	WP_003413917.1	APC family permease	100.0	10.6	88.6
MGA_1880	LOCUS_18770	sequence1:1989517..1989798(+)	frameshift,internal_stop_codon	1989296..1989298(+),1989350..1989352(+),1989483..1989485(+),1989511..1989513(+)	1989792,1989425,1989410,1989955,1989322,1989500,1989358	WP_003900550.1	class I SAM-dependent RNA methyltransferase	95.7	24.7	51.0
MGA_1882	LOCUS_18790	sequence1:1990457..1990717(+)	frameshift,internal_stop_codon	1990960..1990962(+)	1990490,1990718,1990634	WP_003917051.1	ABC transporter ATP-binding protein	54.7	14.6	68.1
MGA_1883	LOCUS_18800	sequence1:1990733..1990960(+)	frameshift,internal_stop_codon	1990960..1990962(+)	1990490,1990718,1990634	WP_003917051.1	ABC transporter ATP-binding protein	98.7	24.6	56.8
MGA_1884	LOCUS_18810	sequence1:1991469..1991735(+)	frameshift,internal_stop_codon	1991863..1991865(+),1991927..1991929(+),1991770..1991772(+),1991839..1991841(+)	1991360,1991683,1991436,1991277,1991892,1991735,1991542,1991511,1991320	WP_003413897.1	fluoroquinolones efflux ABC transporter permease	79.5	29.4	51.4
MGA_1888	LOCUS_18850	sequence1:1996997..1997185(+)	frameshift,internal_stop_codon	1997358..1997360(+),1996753..1996755(+),1997183..1997185(+),1997336..1997338(+),1996991..1996993(+),1996979..1996981(+)	1997378,1997402,1996809,1997290,1997341	WP_010950931.1	FAD-dependent oxidoreductase	98.4	10.1	54.1
MGA_1889	LOCUS_18860	sequence1:1997414..1997632(+)	frameshift,internal_stop_codon	1997358..1997360(+),1997183..1997185(+),1997336..1997338(+)	1997568,1997378,1997341,1997859,1997290,1997899,1997581,1997784,1997405,1997663	WP_010950931.1	FAD-dependent oxidoreductase	70.8	8.3	51.0
MGA_1903	LOCUS_19000	sequence1:2015902..2016249(-)	internal_stop_codon	2015863..2015865(-),2016343..2016345(-),2015749..2015751(-),2015719..2015721(-),2015746..2015748(-),2015764..2015766(-),2015902..2015904(-)		WP_003413592.1	universal stress protein TB31.7	90.4	35.0	47.1
MGA_1904	LOCUS_19010	sequence1:2017080..2017283(-)	frameshift,internal_stop_codon	2017323..2017325(-),2016892..2016894(-),2017033..2017035(-)	2017078,2016984,2017371,2017085,2016927	WP_003410196.1	DUF3097 domain-containing protein	98.5	24.6	62.3
MGA_1910	LOCUS_19070	sequence1:2023590..2024171(-)	frameshift		2024176,2023777,2023746,2023608,2024252	WP_003410309.1	sugar epimerase family protein	97.4	21.7	70.2
MGA_1912	LOCUS_19090	sequence1:2024870..2025079(-)	frameshift,internal_stop_codon	2025318..2025320(-)	2025232,2025082,2025251,2024982	WP_003410309.1	sugar epimerase family protein	42.0	3.4	93.1
MGA_1913	LOCUS_19100	sequence1:2025318..2026013(-)	frameshift,internal_stop_codon	2025318..2025320(-),2026077..2026079(-)	2025232,2025082,2025251	WP_003410309.1	sugar epimerase family protein	98.3	23.5	53.3
MGA_1914	LOCUS_19110	sequence1:2026244..2026780(-)	frameshift		2026783,2026774,2026936,2026287	WP_010886138.1	type I polyketide synthase	94.9	4.1	69.2
MGA_1915	LOCUS_19120	sequence1:2026898..2027125(-)	frameshift,internal_stop_codon	2027297..2027299(-),2027399..2027401(-),2027237..2027239(-),2027126..2027128(-)	2026936,2026777,2026783	WP_010886138.1	type I polyketide synthase	84.0	1.5	79.4
MGA_1916	LOCUS_19130	sequence1:2027399..2028052(-)	frameshift,internal_stop_codon	2027297..2027299(-),2027399..2027401(-),2027237..2027239(-),2027126..2027128(-)	2028062	WP_010950651.1	type I polyketide synthase	100.0	5.2	81.6
MGA_1917	LOCUS_19140	sequence1:2027988..2028857(-)	frameshift		2028865,2028061,2028862	WP_010886138.1	type I polyketide synthase	89.3	6.2	70.9
MGA_1918	LOCUS_19150	sequence1:2028854..2029150(-)	frameshift,internal_stop_codon	2029367..2029369(-),2029415..2029417(-)	2028864,2029170,2028861,2029246	WP_010950651.1	type I polyketide synthase	93.9	2.1	66.3
MGA_1919	LOCUS_19160	sequence1:2029415..2030308(-)	frameshift,internal_stop_codon	2029414..2029416(-),2029366..2029368(-),2030523..2030525(-)	2030278,2030384,2029169,2030290,2030483,2030390,2030489,2029245	WP_010886138.1	type I polyketide synthase	97.0	6.8	66.0
MGA_1921	LOCUS_19180	sequence1:2031037..2031399(-)	frameshift,internal_stop_codon	2030885..2030887(-)	2031041,2031509,2030926	WP_010886138.1	type I polyketide synthase	100.0	3.0	64.3
MGA_1922	LOCUS_19190	sequence1:2031405..2031902(-)	frameshift,internal_stop_codon	2031927..2031929(-)	2032101,2031509,2032120	WP_010886138.1	type I polyketide synthase	79.4	3.2	84.7
MGA_1923	LOCUS_19200	sequence1:2031927..2032118(-)	frameshift,internal_stop_codon	2031927..2031929(-)	2032101,2032120,2032190	WP_010950651.1	type I polyketide synthase	95.2	1.4	80.0
MGA_1924	LOCUS_19210	sequence1:2032176..2032529(-)	frameshift,internal_stop_codon	2031927..2031929(-)	2032104,2032123,2032190	WP_010886138.1	type I polyketide synthase	96.6	2.7	72.6
MGA_1929	LOCUS_19260	sequence1:2036450..2036905(-)	frameshift		2036513,2036891,2036894,2036919	WP_003410605.1	amidohydrolase	83.4	23.6	58.7
MGA_1930	LOCUS_19270	sequence1:2036911..2037093(-)	frameshift		2037286,2036919,2037305,2036891,2037324,2036894	WP_003410605.1	amidohydrolase	80.0	9.7	69.2
MGA_1931	LOCUS_19280	sequence1:2037565..2037753(-)	frameshift,internal_stop_codon	2037564..2037566(-),2037477..2037479(-)	2037361,2037303,2037416,2037322,2037755	WP_003410605.1	amidohydrolase	100.0	11.6	69.4
MGA_1936	LOCUS_19330	sequence1:2040204..2040377(-)	frameshift,internal_stop_codon	2040410..2040412(-)	2040460,2040503	WP_010950652.1	cobaltochelatase subunit CobN	82.5	3.9	68.1
MGA_1938	LOCUS_19350	sequence1:2041293..2041820(+)	frameshift,internal_stop_codon	2042025..2042027(+),2041941..2041943(+),2041902..2041904(+),2042094..2042096(+)	2041520,2041843,2041815,2042057,2041502	WP_003410659.1	precorrin-2 C(20)-methyltransferase	93.1	31.9	64.4
MGA_1939	LOCUS_19360	sequence1:2042286..2042483(+)	frameshift,internal_stop_codon	2042724..2042726(+),2042207..2042209(+),2042024..2042026(+),2042093..2042095(+),2042273..2042275(+),2042688..2042690(+),2042709..2042711(+),2042547..2042549(+),2042712..2042714(+)	2042446,2042062,2042191	WP_003410659.1	precorrin-2 C(20)-methyltransferase	83.1	10.6	66.7
MGA_1941	LOCUS_19380	sequence1:2042725..2042958(-)	frameshift		2042981,2043047,2043128,2042953,2043050,2043101	WP_003410677.1	class A beta-lactamase BlaC	66.2	16.6	58.8
MGA_1942	LOCUS_19390	sequence1:2043313..2043522(-)	frameshift,internal_stop_codon	2043539..2043541(-)	2043130,2043211,2043055,2043314,2043666,2043348,2043514,2043100,2043551	WP_003410677.1	class A beta-lactamase BlaC	79.7	17.9	69.1
MGA_1944	LOCUS_19410	sequence1:2045312..2045500(-)	frameshift		2045530,2045611	WP_003895328.1	precorrin-4 C(11)-methyltransferase	66.1	18.7	61.7
MGA_1946	LOCUS_19430	sequence1:2046411..2046707(+)	frameshift,internal_stop_codon	2046709..2046711(+),2046205..2046207(+),2046286..2046288(+)	2046817,2046246,2046182,2046414,2046222,2046935,2046744,2046204	WP_011727041.1	MMPL family transporter	100.0	10.7	47.6
MGA_1949	LOCUS_19460	sequence1:2048057..2048404(+)	frameshift,internal_stop_codon	2047871..2047873(+),2048049..2048051(+)	2048042,2047963	WP_011727041.1	MMPL family transporter	88.7	11.0	66.0
MGA_1950	LOCUS_19470	sequence1:2048586..2048777(-)	frameshift		2048910,2048889,2048840,2048520,2048590	WP_003412381.1	DegV family protein	98.4	22.1	72.6
MGA_1951	LOCUS_19480	sequence1:2048830..2049063(-)	frameshift,internal_stop_codon	2049073..2049075(-)	2048840,2048889,2048590,2048910	WP_003412381.1	DegV family protein	94.8	26.8	53.3
MGA_1957	LOCUS_19540	sequence1:2052428..2052748(-)	frameshift,internal_stop_codon	2052932..2052934(-),2052853..2052855(-)	2052496,2052740,2052874,2052986,2052795,2052526	WP_003412513.1	VWA domain-containing protein	97.2	21.5	60.2
MGA_1959	LOCUS_19560	sequence1:2053929..2054084(-)	frameshift		2053942,2053860,2054086	WP_010950719.1	MoxR family ATPase	92.2	16.2	78.7
MGA_1960	LOCUS_19570	sequence1:2054867..2055373(-)	frameshift,internal_stop_codon	2054762..2054764(-),2055374..2055376(-),2054867..2054869(-)	2055546,2055470	WP_049769771.1	glutamate-5-semialdehyde dehydrogenase	96.4	38.7	85.2
MGA_1962	LOCUS_19590	sequence1:2058438..2059001(-)	frameshift,internal_stop_codon	2058217..2058219(-),2058145..2058147(-)	2058496,2059019,2059184,2058291,2058261,2058186,2058315	WP_003412557.1	adenylate/guanylate cyclase domain-containing protein	89.8	23.2	58.6
MGA_1977	LOCUS_19740	sequence1:2077244..2077615(-)	frameshift		2077686,2077631,2077340,2077743,2077278,2077327	WP_003412609.1	trans-acting enoyl reductase family protein	99.2	28.2	55.3
MGA_1978	LOCUS_19750	sequence1:2077913..2078140(-)	frameshift		2077748,2078165,2077917,2077688,2078125,2078141	WP_003412609.1	trans-acting enoyl reductase family protein	90.7	19.3	46.3
MGA_1979	LOCUS_19760	sequence1:2079766..2080056(-)	frameshift,internal_stop_codon	2080110..2080112(-),2080101..2080103(-),2080221..2080223(-)	2079827,2080067	WP_003412624.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	95.8	24.1	62.4
MGA_1980	LOCUS_19770	sequence1:2080221..2080373(-)	frameshift,internal_stop_codon	2080109..2080111(-),2080100..2080102(-),2080220..2080222(-)	2080066,2080550,2080630,2080378,2080599	WP_003412624.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	100.0	13.4	80.0
MGA_1981	LOCUS_19780	sequence1:2080928..2081212(-)	frameshift		2081303,2081413,2081343	WP_003412627.1	2-oxoacid:acceptor oxidoreductase subunit alpha	95.7	13.5	68.9
MGA_1982	LOCUS_19790	sequence1:2081402..2081647(-)	frameshift		2081841,2081412,2081780,2081749,2081302,2081342,2081646	WP_003896022.1	2-oxoacid:acceptor oxidoreductase subunit alpha	96.3	12.0	74.4
MGA_1983	LOCUS_19800	sequence1:2081797..2082177(-)	frameshift		2081840,2081782,2081751,2082219,2082252,2081645	WP_003412627.1	2-oxoacid:acceptor oxidoreductase subunit alpha	88.1	17.6	73.0
MGA_1984	LOCUS_19810	sequence1:2082229..2082531(-)	frameshift		2082258,2082222	WP_003896022.1	2-oxoacid:acceptor oxidoreductase subunit alpha	95.0	14.6	66.3
MGA_1991	LOCUS_19880	sequence1:2089588..2089983(-)	frameshift,internal_stop_codon	2089975..2089977(-)	2089920,2089831,2089705,2089868,2090029,2089747,2090228,2090005,2090271	WP_003412657.1	Fpg/Nei family DNA glycosylase	65.6	32.1	47.7
MGA_1992	LOCUS_19890	sequence1:2090021..2090209(-)	frameshift,internal_stop_codon	2089975..2089977(-)	2089920,2089831,2089868,2090029,2089747,2090228,2090005,2090359,2090271	WP_003412657.1	Fpg/Nei family DNA glycosylase	96.8	22.4	63.3
MGA_2001	LOCUS_19980	sequence1:2098446..2098793(+)	frameshift,internal_stop_codon	2099031..2099033(+),2098407..2098409(+),2098926..2098928(+),2099070..2099072(+)	2098891,2098836,2098757,2098508	WP_010950501.1	NADPH-dependent 2,4-dienoyl-CoA reductase	88.7	15.1	63.7
MGA_2002	LOCUS_19990	sequence1:2099282..2099440(+)	frameshift,internal_stop_codon	2099031..2099033(+),2099070..2099072(+)	2099192,2099247	WP_005088026.1	NADPH-dependent 2,4-dienoyl-CoA reductase	100.0	7.7	59.6
MGA_2005	LOCUS_20020	sequence1:2102788..2103006(+)	frameshift		2102919	WP_010886091.1	PE family protein	95.8	10.9	46.4
MGA_2006	LOCUS_20030	sequence1:2103023..2103223(+)	frameshift,internal_stop_codon	2103221..2103223(+)	2103280,2102919	WP_003898753.1	PE family protein	98.5	20.1	49.2
MGA_2014	LOCUS_20110	sequence1:2110553..2110816(-)	frameshift,internal_stop_codon	2110593..2110595(-),2110924..2110926(-),2110831..2110833(-)	2110872,2110577,2110629	WP_003406093.1	nitrate reductase molybdenum cofactor assembly chaperone	69.0	29.9	58.3
MGA_2016	LOCUS_20130	sequence1:2111557..2111748(-)	frameshift,internal_stop_codon	2111468..2111470(-),2112015..2112017(-),2111906..2111908(-),2111816..2111818(-),2111555..2111557(-)	2111761,2111428,2111365,2111915,2111981,2111343	WP_003406090.1	nitrate reductase subunit beta	79.4	9.5	73.6
MGA_2017	LOCUS_20140	sequence1:2112972..2113178(-)	frameshift,internal_stop_codon	2113285..2113287(-),2112884..2112886(-),2113355..2113357(-),2113316..2113318(-),2112968..2112970(-)	2113312,2113217,2112865,2113221,2113195,2113260,2113369,2113375	WP_010950499.1	nitrate reductase subunit alpha	100.0	5.5	79.4
MGA_2018	LOCUS_20150	sequence1:2113361..2113747(-)	frameshift,internal_stop_codon	2113315..2113317(-),2113284..2113286(-),2113354..2113356(-)	2113216,2113220,2113900,2113741,2113262,2113197,2113368,2113976,2113374,2113311	WP_010950499.1	nitrate reductase subunit alpha	95.3	9.9	64.8
MGA_2019	LOCUS_20160	sequence1:2113728..2113874(-)	frameshift		2113976,2113900,2113741	WP_010950499.1	nitrate reductase subunit alpha	91.7	3.6	65.9
MGA_2020	LOCUS_20170	sequence1:2113935..2114315(-)	frameshift,internal_stop_codon	2114472..2114474(-),2114345..2114347(-)	2114386,2113975,2114456,2113899,2113740	WP_003898748.1	nitrate reductase subunit alpha	89.7	10.1	65.3
MGA_2021	LOCUS_20180	sequence1:2114472..2114699(-)	frameshift,internal_stop_codon	2114470..2114472(-),2114704..2114706(-),2114343..2114345(-)	2114384,2114867,2114454,2114951,2114966,2114797	WP_003898748.1	nitrate reductase subunit alpha	98.7	6.2	64.5
MGA_2023	LOCUS_20200	sequence1:2116158..2116391(-)	frameshift,internal_stop_codon	2116253..2116255(-),2115905..2115907(-),2115890..2115892(-),2116175..2116177(-),2116074..2116076(-)	2116064,2116000,2115936,2116189,2116231,2116265,2115926,2116156,2116125	WP_003898748.1	nitrate reductase subunit alpha	87.0	5.4	65.7
MGA_2029	LOCUS_20260	sequence1:2121176..2121391(-)	frameshift,internal_stop_codon	2121176..2121178(-),2121110..2121112(-)	2121154,2120998	WP_003406064.1	HhH-GPD-type base excision DNA repair protein	81.7	34.9	54.4
MGA_2030	LOCUS_20270	sequence1:2121772..2122083(-)	internal_stop_codon	2122105..2122107(-)		WP_041323864.1	PPOX class F420-dependent oxidoreductase	100.0	70.1	80.6
MGA_2031	LOCUS_20280	sequence1:2122350..2122700(+)	frameshift,internal_stop_codon	2122262..2122264(+),2122698..2122700(+),2122770..2122772(+)	2122300	WP_009936776.1	DUF1697 domain-containing protein	81.9	44.6	57.9
MGA_2036	LOCUS_20330	sequence1:2127743..2128093(-)	frameshift,internal_stop_codon	2127667..2127669(-)	2127576,2127829,2127477	WP_003416091.1	DUF808 domain-containing protein	67.2	31.0	45.3
MGA_2039	LOCUS_20360	sequence1:2130112..2130696(+)	partial			WP_003913073.1	reverse transcriptase domain-containing protein	63.9	52.3	64.5
MGA_2042	LOCUS_20390	sequence1:2133338..2133547(-)	frameshift,internal_stop_codon	2133594..2133596(-)	2133523,2133716,2133753,2133545,2133357	WP_003416111.1	maleylpyruvate isomerase family mycothiol-dependent enzyme	84.1	20.5	55.2
MGA_2046	LOCUS_20430	sequence1:2137051..2137302(-)	frameshift,internal_stop_codon	2137402..2137404(-),2137023..2137025(-)	2137010,2137380,2136775,2137055,2136922,2137516,2137295	WP_003416127.1	mechanosensitive ion channel family protein	92.8	26.3	60.5
MGA_2055	LOCUS_20520	sequence1:2145886..2146032(+)	frameshift,internal_stop_codon	2146030..2146032(+)	2146056,2146300,2146102	WP_003416403.1	NADPH:quinone oxidoreductase family protein	100.0	14.9	68.8
MGA_2056	LOCUS_20530	sequence1:2146114..2146314(+)	frameshift,internal_stop_codon	2146440..2146442(+),2146030..2146032(+),2146410..2146412(+)	2146390,2146102,2146056,2146487,2146300	WP_003416403.1	NADPH:quinone oxidoreductase family protein	89.4	18.3	74.6
MGA_2057	LOCUS_20540	sequence1:2146514..2146702(+)	frameshift,internal_stop_codon	2146690..2146692(+),2146672..2146674(+),2146409..2146411(+),2146439..2146441(+),2146783..2146785(+)	2146646,2146299,2146389,2146486	WP_003416403.1	NADPH:quinone oxidoreductase family protein	66.1	12.7	65.9
MGA_2058	LOCUS_20550	sequence1:2147100..2147318(+)	frameshift		2147490,2147309,2147462	WP_003900644.1	NADH-quinone oxidoreductase subunit NuoN	79.2	10.7	59.6
MGA_2066	LOCUS_20630	sequence1:2163257..2163943(+)	frameshift,internal_stop_codon	2163663..2163665(+)	2163922,2163668,2163974,2163655,2164232,2163711	WP_003412223.1	amidase	96.9	47.7	58.6
MGA_2069	LOCUS_20660	sequence1:2165701..2165961(-)	partial			WP_003412226.1	hypothetical protein	68.6	52.2	76.3
MGA_2070	LOCUS_20670	sequence1:2165954..2166607(-)	internal_stop_codon	2166617..2166619(-)		WP_003412229.1	hemolysin family protein	100.0	49.9	79.3
MGA_2071	LOCUS_20680	sequence1:2166617..2166871(-)	frameshift,internal_stop_codon	2166617..2166619(-),2167053..2167055(-),2167035..2167037(-)	2166890	WP_003412229.1	hemolysin family protein	100.0	19.3	73.8
MGA_2078	LOCUS_20750	sequence1:2176293..2176481(+)	frameshift,internal_stop_codon	2176285..2176287(+)	2176278,2176600,2176473,2176666,2176555,2176747	WP_003412289.1	sodium-dependent bicarbonate transport family permease	96.8	14.1	58.3
MGA_2080	LOCUS_20770	sequence1:2179098..2179571(+)	frameshift,internal_stop_codon	2179569..2179571(+),2179091..2179093(+)	2179444,2179337,2179691,2179740,2179102,2179359	WP_003899303.1	sulfite reductase SirA	98.7	27.9	57.0
MGA_2081	LOCUS_20780	sequence1:2179632..2179964(+)	frameshift,internal_stop_codon	2179569..2179571(+)	2179953,2180017,2179444,2179691,2179740,2179359	WP_003899303.1	sulfite reductase SirA	96.4	19.5	62.7
MGA_2082	LOCUS_20790	sequence1:2180748..2181632(+)	frameshift		2181836,2181614	WP_003411603.1	diacylglycerol kinase	50.7	48.2	59.1
MGA_2083	LOCUS_20800	sequence1:2181828..2182136(+)	frameshift		2181614,2181839	WP_003411603.1	diacylglycerol kinase	87.3	28.8	73.0
MGA_2086	LOCUS_20830	sequence1:2183590..2183727(-)	frameshift,internal_stop_codon	2183783..2183785(-)	2183882,2183758	WP_054879788.1	class I SAM-dependent methyltransferase	88.9	11.1	87.5
MGA_2087	LOCUS_20840	sequence1:2184211..2184507(-)	frameshift,internal_stop_codon	2184511..2184513(-)	2184258	WP_054879788.1	class I SAM-dependent methyltransferase	93.9	31.6	57.9
MGA_2088	LOCUS_20850	sequence1:2184511..2184669(-)	frameshift,internal_stop_codon	2184511..2184513(-)	2184258	WP_054879788.1	class I SAM-dependent methyltransferase	96.2	13.9	72.0
MGA_2091	LOCUS_20880	sequence1:2186848..2187531(-)	frameshift		2187568,2186904	WP_003901363.1	apolipoprotein N-acyltransferase	92.1	40.4	59.8
MGA_2092	LOCUS_20890	sequence1:2187566..2187844(-)	frameshift		2187568	WP_003901363.1	apolipoprotein N-acyltransferase	68.5	12.5	58.7
MGA_2093	LOCUS_20900	sequence1:2188016..2188495(+)	frameshift,internal_stop_codon	2188723..2188725(+)	2188484,2188441,2188554,2188524,2188590	WP_003899238.1	SDR family oxidoreductase	78.0	43.5	55.4
MGA_2095	LOCUS_20920	sequence1:2190462..2190737(-)	frameshift		2190736,2190770,2190584,2190681,2190511	WP_204250320.1	dihydrodipicolinate reductase	76.9	19.9	49.3
MGA_2096	LOCUS_20930	sequence1:2190768..2191355(-)	frameshift		2190736,2190770,2190584,2190681,2190511	WP_204250320.1	dihydrodipicolinate reductase	52.8	28.9	57.3
MGA_2105	LOCUS_21020	sequence1:2199595..2199843(+)	frameshift,internal_stop_codon	2199841..2199843(+),2199913..2199915(+),2199895..2199897(+)	2199987,2199870	WP_011727799.1	FAD-dependent monooxygenase	81.7	13.0	53.7
MGA_2108	LOCUS_21050	sequence1:2201984..2202259(+)	frameshift,internal_stop_codon	2202257..2202259(+)	2201928,2201867	WP_003899004.1	glycosyltransferase	96.7	22.3	68.2
MGA_2110	LOCUS_21070	sequence1:2204058..2204252(+)	frameshift		2203902,2204047	WP_003411722.1	sulfurtransferase	95.3	21.5	62.3
MGA_2115	LOCUS_21120	sequence1:2209893..2210042(+)	frameshift,internal_stop_codon	2209737..2209739(+),2209614..2209616(+)	2209869,2209815,2209685,2209775	WP_011726793.1	arginine decarboxylase	89.8	9.1	72.7
MGA_2134	LOCUS_21310	sequence1:2234326..2234592(+)	frameshift,internal_stop_codon	2234311..2234313(+)	2234192	WP_003407514.1	TetR/AcrR family transcriptional regulator	98.9	46.5	73.6
MGA_2139	LOCUS_21360	sequence1:2240866..2241069(-)	frameshift		2241091,2240964,2240997,2240870	WP_054880958.1	hypothetical protein	97.0	30.0	64.6
MGA_2142	LOCUS_21390	sequence1:2243872..2244093(-)	frameshift,internal_stop_codon	2243679..2243681(-),2244111..2244113(-),2244126..2244128(-),2243745..2243747(-)	2243891,2243645,2244294,2244167,2243693,2244319	WP_011726646.1	IS1634-like element IS1549 family transposase	94.5	14.1	66.7
MGA_2148	LOCUS_21450	sequence1:2248103..2248360(-)	frameshift		2248379	WP_003899876.1	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	100.0	60.3	60.0
MGA_2149	LOCUS_21460	sequence1:2248374..2248568(-)	frameshift		2248379	WP_003899876.1	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	100.0	36.8	70.3
MGA_2155	LOCUS_21520	sequence1:2254337..2254663(+)	frameshift,internal_stop_codon	2254621..2254623(+)	2254337,2254098,2254677,2254565	WP_010950438.1	acyl-CoA dehydrogenase family protein	70.4	19.5	64.5
MGA_2156	LOCUS_21530	sequence1:2254703..2255029(+)	frameshift,internal_stop_codon	2255160..2255162(+),2255193..2255195(+)	2255012,2254948	WP_003403844.1	3-hydroxyisobutyrate dehydrogenase	70.4	25.9	52.6
MGA_2158	LOCUS_21550	sequence1:2257424..2257606(-)	frameshift,internal_stop_codon	2257423..2257425(-),2257266..2257268(-),2257167..2257169(-),2257621..2257623(-)	2257220,2257702,2257308,2257626,2257292	WP_011727696.1	3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein	96.7	17.1	56.9
MGA_2159	LOCUS_21560	sequence1:2257791..2257979(-)	frameshift,internal_stop_codon	2258234..2258236(-)	2257899,2257972,2257918	WP_003892876.1	hypothetical protein	90.3	24.8	60.7
MGA_2165	LOCUS_21620	sequence1:2264300..2264470(+)	frameshift,internal_stop_codon	2264202..2264204(+),2264156..2264158(+)	2264097,2264034,2264194,2264627,2264539,2264076,2264575	WP_003403717.1	class I SAM-dependent methyltransferase	87.5	15.4	53.1
MGA_2166	LOCUS_21630	sequence1:2265181..2265447(+)	frameshift		2265165,2264943	WP_003912218.1	class I SAM-dependent methyltransferase	87.5	25.2	36.4
MGA_2168	LOCUS_21650	sequence1:2267499..2267699(+)	frameshift,internal_stop_codon	2267898..2267900(+)	2267474,2267815,2267417,2267687,2267912,2267303,2267787	WP_003403698.1	D-3-phosphoglycerate dehydrogenase SerA	93.9	19.0	64.5
MGA_2180	LOCUS_21770	sequence1:2276809..2277117(-)	frameshift,internal_stop_codon	2276829..2276831(-),2276525..2276527(-),2276751..2276753(-),2277195..2277197(-)	2277328,2276609,2277125,2276885,2277240,2276618,2276558	WP_003403610.1	formylglycine-generating enzyme family protein	78.4	24.7	60.0
MGA_2181	LOCUS_21780	sequence1:2277421..2277633(-)	frameshift		2277664,2277716	WP_003898562.1	DUF4436 domain-containing protein	97.1	21.7	58.8
MGA_2196	LOCUS_21930	sequence1:2288060..2288461(-)	frameshift,internal_stop_codon	2288633..2288635(-),2288501..2288503(-),2287882..2287884(-),2288609..2288611(-)	2287941,2288101	WP_003403503.1	mycofactocin system GMC family oxidoreductase MftG	90.2	25.1	59.2
MGA_2199	LOCUS_21960	sequence1:2289519..2289710(-)	frameshift,internal_stop_codon	2289382..2289384(-),2289271..2289273(-),2289262..2289264(-),2289517..2289519(-),2289794..2289796(-),2289379..2289381(-),2289934..2289936(-)	2289840,2289906,2289411,2289918,2289803,2289486,2289679	WP_003403501.1	mycofactocin biosynthesis glycosyltransferase MftF	82.5	11.1	57.7
MGA_2200	LOCUS_21970	sequence1:2290367..2290540(-)	frameshift,internal_stop_codon	2290222..2290224(-)	2290720,2290119,2290164,2290389,2290358,2290695,2290300	WP_003403497.1	mycofactocin biosynthesis peptidyl-dipeptidase MftE	70.2	15.9	72.5
MGA_2201	LOCUS_21980	sequence1:2291128..2291316(-)	frameshift,internal_stop_codon	2291529..2291531(-),2291382..2291384(-)	2291504,2291185,2291547,2291348,2291369,2291065,2291581	WP_014877068.1	mycofactocin biosynthesis FMN-dependent deaminase MftD	72.6	11.3	71.1
MGA_2203	LOCUS_22000	sequence1:2294015..2294209(+)	frameshift,internal_stop_codon	2294320..2294322(+),2294208..2294210(+),2293967..2293969(+)	2294291,2293981,2294047	WP_003403482.1	mycofactocin system transcriptional regulator	81.2	26.3	78.8
MGA_2204	LOCUS_22010	sequence1:2295220..2295480(-)	frameshift,internal_stop_codon	2295538..2295540(-)	2295504,2295582	WP_003901000.1	FAD/NAD(P)-binding oxidoreductase	100.0	21.2	60.5
MGA_2206	LOCUS_22030	sequence1:2295825..2296010(-)	frameshift,internal_stop_codon	2295538..2295540(-)	2295742,2295830,2295582	WP_003901000.1	FAD/NAD(P)-binding oxidoreductase	72.1	12.3	62.0
MGA_2207	LOCUS_22040	sequence1:2297512..2297640(-)	frameshift,internal_stop_codon	2297328..2297330(-),2297714..2297716(-),2297512..2297514(-),2297641..2297643(-)	2297348,2297397,2297686,2297231	WP_010950431.1	SHOCT domain-containing protein	95.2	15.1	72.5
MGA_2213	LOCUS_22100	sequence1:2304509..2304718(-)	frameshift		2304960,2304737,2304938,2304700	WP_003403451.1	TetR/AcrR family transcriptional regulator	84.1	29.6	67.2
MGA_2215	LOCUS_22120	sequence1:2306105..2306242(-)	frameshift,internal_stop_codon	2306406..2306408(-),2306064..2306066(-),2306103..2306105(-)	2306466,2306482,2306324,2305963,2306252,2306045	WP_003403433.1	crotonase/enoyl-CoA hydratase family protein	100.0	17.1	71.1
MGA_2216	LOCUS_22130	sequence1:2306426..2306716(-)	frameshift,internal_stop_codon	2306406..2306408(-)	2306482,2306252,2306469,2306327	WP_003403433.1	crotonase/enoyl-CoA hydratase family protein	85.4	31.2	57.3
MGA_2218	LOCUS_22150	sequence1:2309253..2309543(-)	frameshift,internal_stop_codon	2309770..2309772(-),2309716..2309718(-),2309252..2309254(-)	2309543,2309128,2309485,2309646,2309339,2309038,2309751,2309367,2309791	WP_011727643.1	acyl-CoA dehydrogenase family protein	100.0	17.2	45.7
MGA_2224	LOCUS_22210	sequence1:2320483..2320674(-)	frameshift,internal_stop_codon	2320481..2320483(-)	2320675,2320684,2320910	WP_003403360.1	carotenoid cleavage oxygenase	100.0	12.6	65.1
MGA_2225	LOCUS_22220	sequence1:2320664..2320933(-)	frameshift,internal_stop_codon	2320481..2320483(-),2321010..2321012(-)	2320675,2320684,2321166,2320910	WP_003403360.1	carotenoid cleavage oxygenase	87.6	16.0	56.2
MGA_2226	LOCUS_22230	sequence1:2321221..2321463(-)	frameshift,internal_stop_codon	2321010..2321012(-)	2321166	WP_003403360.1	carotenoid cleavage oxygenase	98.8	15.8	53.2
MGA_2234	LOCUS_22310	sequence1:2330832..2330969(+)	frameshift,internal_stop_codon	2330801..2330803(+),2330799..2330801(+)	2330632,2330692	WP_005077681.1	YciI family protein	95.6	18.1	58.1
MGA_2252	LOCUS_22490	sequence1:2345269..2345682(-)	internal_stop_codon	2345269..2345271(-)		WP_010908614.1	carbonic anhydrase	100.0	64.3	93.4
MGA_2259	LOCUS_22560	sequence1:2351650..2351976(-)	internal_stop_codon	2351998..2352000(-)		WP_003900145.1	glutamate--cysteine ligase	70.4	20.2	71.1
MGA_2262	LOCUS_22590	sequence1:2352874..2353128(-)	partial			WP_041323879.1	LytR C-terminal domain-containing protein	100.0	52.5	97.6
MGA_2266	LOCUS_22630	sequence1:2354913..2355284(+)	frameshift		2354640,2354689,2354867,2354750	WP_003402179.1	hypothetical protein	91.1	38.4	47.5
MGA_2271	LOCUS_22680	sequence1:2359713..2360084(+)	frameshift,internal_stop_codon	2360083..2360085(+)	2360097,2360166,2360169,2359466,2359709	WP_003911174.1	cation-translocating P-type ATPase	100.0	8.5	60.3
MGA_2272	LOCUS_22690	sequence1:2360277..2360513(+)	frameshift,internal_stop_codon	2360082..2360084(+),2360665..2360667(+),2360760..2360762(+)	2360657,2360099,2360724,2360165,2360168,2360746,2360620	WP_003904400.1	cation-translocating P-type ATPase	100.0	5.5	56.5
MGA_2273	LOCUS_22700	sequence1:2361680..2361892(-)	partial			WP_003419226.1	PPE family protein	100.0	17.2	50.0
MGA_2276	LOCUS_22730	sequence1:2365318..2366292(+)	frameshift,internal_stop_codon	2366290..2366292(+)	2366412,2366382	WP_197492561.1	hypothetical protein	100.0	83.6	76.5
MGA_2287	LOCUS_22840	sequence1:2373414..2373635(+)	frameshift,internal_stop_codon	2373760..2373762(+),2373379..2373381(+),2373394..2373396(+)	2373187,2373212,2373339,2373615	WP_011726646.1	IS1634-like element IS1549 family transposase	94.5	14.1	66.7
MGA_2288	LOCUS_22850	sequence1:2373702..2374436(-)	partial			WP_010908520.1	EAL domain-containing protein	84.4	33.1	92.7
MGA_2289	LOCUS_22860	sequence1:2374454..2374927(-)	partial			WP_010908521.1	Rv1355c family protein	100.0	21.8	91.1
MGA_2294	LOCUS_22910	sequence1:2378060..2378281(+)	frameshift,internal_stop_codon	2378406..2378408(+),2378040..2378042(+),2378472..2378474(+),2378025..2378027(+)	2377985,2377858,2378261,2377833,2378507,2378459	WP_011726646.1	IS1634-like element IS1549 family transposase	94.5	14.1	66.7
MGA_2306	LOCUS_23030	sequence1:2388242..2388463(+)	frameshift,internal_stop_codon	2388501..2388503(+)	2388593,2388627,2388164,2388421,2388228,2388631,2388665	WP_010950357.1	MCE family protein	82.2	13.2	53.3
MGA_2310	LOCUS_23070	sequence1:2395337..2395771(-)	frameshift		2395460,2395977,2395451,2395628,2395835,2395934	WP_162618338.1	M18 family aminopeptidase	100.0	34.0	58.1
MGA_2311	LOCUS_23080	sequence1:2395792..2396061(-)	frameshift		2396091,2396295,2395976,2395834,2395627,2395933	WP_162618338.1	M18 family aminopeptidase	86.5	18.1	67.5
MGA_2312	LOCUS_23090	sequence1:2396042..2396239(-)	frameshift,internal_stop_codon	2396470..2396472(-),2396091..2396093(-)	2395936,2396295,2395834,2395979,2396094	WP_162618338.1	M18 family aminopeptidase	80.0	12.4	86.8
MGA_2316	LOCUS_23130	sequence1:2399425..2399895(+)	frameshift,internal_stop_codon	2399909..2399911(+),2400056..2400058(+),2399854..2399856(+),2400154..2400156(+)	2399841,2400098,2399898,2399835,2400079	WP_005113125.1	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	35.9	12.0	57.1
MGA_2320	LOCUS_23170	sequence1:2404487..2404642(-)	frameshift,internal_stop_codon	2404772..2404774(-),2404667..2404669(-),2404332..2404334(-),2404790..2404792(-),2404694..2404696(-),2404486..2404488(-)	2404416,2404464,2404280,2404681,2404440,2404636	WP_003911278.1	FAD-binding dehydrogenase	94.1	8.5	72.9
MGA_2321	LOCUS_23180	sequence1:2406469..2406684(+)	frameshift,internal_stop_codon	2406685..2406687(+),2406237..2406239(+)	2406946,2406864,2406357,2406486,2406907,2406970,2406459,2406780,2406302	WP_003403977.1	MFS transporter	87.3	11.7	57.1
MGA_2323	LOCUS_23200	sequence1:2407512..2407733(-)	frameshift,internal_stop_codon	2407903..2407905(-)	2407737,2407550	WP_011730835.1	TetR/AcrR family transcriptional regulator	83.6	33.7	54.1
MGA_2329	LOCUS_23260	sequence1:2414671..2414982(+)	frameshift		2415088,2414985,2415257,2414868	WP_003403949.1	DUF429 domain-containing protein	68.9	27.4	62.0
MGA_2330	LOCUS_23270	sequence1:2415020..2415451(+)	frameshift		2415088,2414985,2414868	WP_003403949.1	DUF429 domain-containing protein	81.8	43.6	43.3
MGA_2331	LOCUS_23280	sequence1:2416529..2416726(+)	frameshift,internal_stop_codon	2416447..2416449(+)	2416933,2416838,2416874,2416753,2416723,2416820,2416533,2416926	WP_003403938.1	iron-stress inducible esterase	95.4	20.5	74.2
MGA_2332	LOCUS_23290	sequence1:2416917..2417195(+)	frameshift,internal_stop_codon	2417142..2417144(+)	2416933,2416838,2416874,2417168,2416753,2416723,2416820,2417108,2416926	WP_003403938.1	iron-stress inducible esterase	91.3	27.4	53.6
MGA_2335	LOCUS_23320	sequence1:2425140..2425589(+)	frameshift,internal_stop_codon	2425601..2425603(+)	2425732,2425384,2425512,2425579,2425388,2425612,2425335,2425242,2425564	WP_003898577.1	lanosterol 14-alpha demethylase	75.2	24.4	41.1
MGA_2336	LOCUS_23330	sequence1:2425513..2425731(+)	frameshift,internal_stop_codon	2425601..2425603(+)	2425732,2425384,2425512,2425579,2425388,2425612,2425867,2425948,2425335,2425242,2425564	WP_003898577.1	lanosterol 14-alpha demethylase	100.0	15.7	51.3
MGA_2338	LOCUS_23350	sequence1:2427540..2428202(+)	frameshift,internal_stop_codon	2427496..2427498(+)	2428022,2428201,2428041,2427471,2428191	WP_003403885.1	NDMA-dependent alcohol dehydrogenase	52.7	30.9	68.1
MGA_2345	LOCUS_23420	sequence1:2431934..2432155(+)	frameshift,internal_stop_codon	2431929..2431931(+)	2432168,2431706,2432190,2432150	WP_003906521.1	HNH endonuclease signature motif containing protein	98.6	15.5	54.2
MGA_2347	LOCUS_23440	sequence1:2432818..2432994(-)	frameshift,internal_stop_codon	2433054..2433056(-)	2433086,2432831	WP_003916717.1	sensory box histidine kinase PhoR	100.0	12.0	67.2
MGA_2348	LOCUS_23450	sequence1:2433048..2433329(-)	frameshift,internal_stop_codon	2433052..2433054(-)	2433412,2433336,2433339,2432829,2433087	WP_014878477.1	HAMP domain-containing sensor histidine kinase	87.1	16.9	65.4
MGA_2349	LOCUS_23460	sequence1:2433380..2433691(-)	frameshift,internal_stop_codon	2433953..2433955(-)	2433411,2433910,2433335,2433658,2433338	WP_014878477.1	HAMP domain-containing sensor histidine kinase	75.7	16.3	61.5
MGA_2362	LOCUS_23590	sequence1:2450935..2451249(-)	frameshift,internal_stop_codon	2450732..2450734(-),2450768..2450770(-)	2451033,2451007,2450991,2451023,2450927	WP_003900075.1	SDR family oxidoreductase	78.8	25.2	50.0
MGA_2363	LOCUS_23600	sequence1:2452556..2452693(-)	frameshift		2452701,2452694	WP_010908785.1	hypothetical protein	91.1	52.6	82.9
MGA_2367	LOCUS_23640	sequence1:2457371..2457664(-)	frameshift,internal_stop_codon	2457309..2457311(-),2457683..2457685(-)	2457393,2457716,2457141,2457884,2457559,2457211,2457260	WP_010950412.1	hypothetical protein	35.1	7.6	76.5
MGA_2374	LOCUS_23710	sequence1:2462424..2462588(-)	frameshift,internal_stop_codon	2462604..2462606(-),2462424..2462426(-),2462415..2462417(-)	2462336	WP_003402909.1	SDR family oxidoreductase	98.1	17.3	60.4
MGA_2375	LOCUS_23720	sequence1:2462604..2463119(-)	frameshift,internal_stop_codon	2462604..2462606(-),2462424..2462426(-),2462415..2462417(-)	2462336	WP_003402909.1	SDR family oxidoreductase	87.1	50.7	66.4
MGA_2377	LOCUS_23740	sequence1:2464121..2464312(-)	frameshift,internal_stop_codon	2464447..2464449(-),2464428..2464430(-)	2464434,2464507,2464373,2464126	WP_010908794.1	hypothetical protein	98.4	30.5	80.6
MGA_2378	LOCUS_23750	sequence1:2465266..2465526(-)	frameshift,internal_stop_codon	2465266..2465268(-),2465774..2465776(-),2465606..2465608(-),2465690..2465692(-)	2465563	WP_003402917.1	fatty-acid--CoA ligase FadD8	98.8	14.0	53.5
MGA_2379	LOCUS_23760	sequence1:2466103..2466291(-)	frameshift,internal_stop_codon	2466102..2466104(-),2466328..2466330(-),2466099..2466101(-),2465841..2465843(-),2465868..2465870(-),2465853..2465855(-),2465913..2465915(-),2465862..2465864(-)	2466240,2466206	WP_003402917.1	fatty-acid--CoA ligase FadD8	96.8	10.2	60.7
MGA_2380	LOCUS_23770	sequence1:2466328..2466516(-)	frameshift,internal_stop_codon	2466327..2466329(-),2466612..2466614(-),2466098..2466100(-),2466101..2466103(-)	2466208,2466681,2466699,2466239	WP_003402917.1	fatty-acid--CoA ligase FadD8	95.2	10.3	72.9
MGA_2382	LOCUS_23790	sequence1:2468109..2468420(+)	frameshift,internal_stop_codon	2467940..2467942(+)	2468080	WP_003402920.1	amidohydrolase	98.1	18.9	74.3
MGA_2387	LOCUS_23840	sequence1:2473568..2473744(+)	frameshift,internal_stop_codon	2473324..2473326(+),2473743..2473745(+),2473459..2473461(+)	2473380,2473494,2473567	WP_003900963.1	GDP-mannose-dependent alpha-mannosyltransferase	100.0	17.7	58.2
MGA_2395	LOCUS_23920	sequence1:2481273..2481605(-)	frameshift,internal_stop_codon	2480993..2480995(-),2481851..2481853(-),2481727..2481729(-),2481641..2481643(-)	2481604,2481671,2481321,2481065,2481168,2481684,2481814,2481116,2481757,2481631	WP_003900965.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	83.6	26.1	64.1
MGA_2396	LOCUS_23930	sequence1:2483241..2483564(-)	frameshift		2483513,2483706,2483453	WP_003402987.1	YajQ family cyclic di-GMP-binding protein	95.3	62.0	54.8
MGA_2398	LOCUS_23950	sequence1:2484958..2485362(+)	partial			WP_010908807.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	59.7	67.2	76.2
MGA_2405	LOCUS_24020	sequence1:2496977..2497177(-)	frameshift,internal_stop_codon	2496975..2496977(-),2497318..2497320(-),2496790..2496792(-),2496840..2496842(-),2496909..2496911(-),2496945..2496947(-)	2496738,2497283,2497196,2497311	WP_003900733.1	ABC transporter ATP-binding protein	98.5	11.9	76.9
MGA_2406	LOCUS_24030	sequence1:2498786..2498998(-)	frameshift,internal_stop_codon	2499053..2499055(-)	2499089,2499171,2498727,2498809,2498667,2498607	WP_003419701.1	ABC transporter permease	87.1	21.1	71.2
MGA_2407	LOCUS_24040	sequence1:2499543..2499788(-)	frameshift,internal_stop_codon	2499542..2499544(-)	2499826	WP_003899629.1	ABC transporter substrate-binding protein	100.0	14.8	52.9
MGA_2409	LOCUS_24060	sequence1:2501068..2501343(+)	frameshift,internal_stop_codon	2501544..2501546(+),2500928..2500930(+),2501343..2501345(+),2501460..2501462(+)	2501411,2501588,2501080,2500921,2501002,2501582	WP_003899631.1	acetate--CoA ligase	95.6	14.3	60.2
MGA_2417	LOCUS_24140	sequence1:2508661..2508843(+)	partial			WP_003899635.1	hypothetical protein	85.0	40.8	70.6
MGA_2427	LOCUS_24240	sequence1:2518580..2518813(+)	frameshift,internal_stop_codon	2518812..2518814(+),2518368..2518370(+),2518534..2518536(+)	2518448,2518721,2518572,2518663	WP_003901694.1	PLP-dependent cysteine synthase family protein	100.0	22.8	49.4
MGA_2429	LOCUS_24260	sequence1:2522587..2522769(-)	internal_stop_codon	2522896..2522898(-)		WP_003419765.1	GatB/YqeY domain-containing protein	86.7	33.8	76.9
MGA_2431	LOCUS_24280	sequence1:2524066..2524341(+)	frameshift		2524073,2523795,2523892	WP_003419768.1	membrane protein	94.5	20.6	50.5
MGA_2433	LOCUS_24300	sequence1:2526337..2526483(+)	frameshift,internal_stop_codon	2526642..2526644(+)	2526272,2526498,2526565,2526725,2526683,2526459	WP_003419775.1	MoxR family ATPase	85.4	11.5	68.3
MGA_2440	LOCUS_24370	sequence1:2535514..2535681(-)	frameshift,internal_stop_codon	2535290..2535292(-),2535464..2535466(-),2535939..2535941(-),2535470..2535472(-)	2535330,2535299,2535524,2535397,2535686,2535430,2535249,2535286	WP_003901701.1	ergothioneine biosynthesis PLP-dependent enzyme EgtE	94.5	13.3	65.4
MGA_2441	LOCUS_24380	sequence1:2535678..2535929(-)	frameshift,internal_stop_codon	2535469..2535471(-),2535938..2535940(-),2535463..2535465(-)	2536016,2536082,2535523,2535396,2535685,2535429	WP_003901701.1	ergothioneine biosynthesis PLP-dependent enzyme EgtE	90.4	18.5	66.7
MGA_2444	LOCUS_24410	sequence1:2536412..2536801(-)	frameshift,internal_stop_codon	2536835..2536837(-),2536267..2536269(-)	2536151,2536170,2536483,2536943	WP_003419799.1	L-histidine N(alpha)-methyltransferase	82.2	34.9	63.4
MGA_2467	LOCUS_24640	sequence1:2565417..2565620(+)	frameshift,internal_stop_codon	2565648..2565650(+),2565618..2565620(+),2565175..2565177(+)	2565376,2565880,2565204,2565656,2565161,2565768	WP_011727034.1	dihydrodipicolinate reductase	100.0	18.9	65.7
MGA_2469	LOCUS_24660	sequence1:2567530..2567892(+)	frameshift,internal_stop_codon	2567345..2567347(+)	2567504,2567889,2567467	WP_003420425.1	cutinase family protein	99.2	57.1	50.4
MGA_2471	LOCUS_24680	sequence1:2569469..2569636(+)	frameshift,internal_stop_codon	2569637..2569639(+)	2569856,2569282,2569426,2569300,2569669,2569227,2569789	WP_010950932.1	MFS transporter	76.4	3.9	61.9
MGA_2476	LOCUS_24730	sequence1:2574885..2575205(-)	frameshift,internal_stop_codon	2575233..2575235(-),2575218..2575220(-)	2574914,2574884,2575476,2575254,2575480,2575337,2575291	WP_003899657.1	non-homologous end-joining DNA ligase	91.5	28.0	71.1
MGA_2496	LOCUS_24930	sequence1:2622520..2622963(+)	frameshift,internal_stop_codon	2622943..2622945(+)	2623065,2622993,2622455,2622903,2622473,2622509,2622335	WP_003900750.1	alkyl/aryl-sulfatase	84.4	22.7	54.7
MGA_2497	LOCUS_24940	sequence1:2623092..2623487(+)	frameshift,internal_stop_codon	2623503..2623505(+),2623638..2623640(+),2623578..2623580(+),2623488..2623490(+),2622940..2622942(+),2623695..2623697(+)	2623384,2622990,2622888,2623496,2623406,2623071	WP_011731217.1	alkyl sulfatase dimerization domain-containing protein	100.0	21.4	67.2
MGA_2499	LOCUS_24960	sequence1:2624619..2624819(-)	frameshift,internal_stop_codon	2624619..2624621(-),2624526..2624528(-)	2624522,2624459	WP_011731216.1	SDR family oxidoreductase	97.0	25.5	56.2
MGA_2502	LOCUS_24990	sequence1:2627473..2627640(+)	frameshift,internal_stop_codon	2627292..2627294(+),2627461..2627463(+)	2627520,2627523,2627550,2627303	WP_003420539.1	phosphotransferase family protein	94.5	14.8	55.8
MGA_2504	LOCUS_25010	sequence1:2628630..2628953(+)	frameshift,internal_stop_codon	2628364..2628366(+),2628403..2628405(+)	2628480,2628656,2628529,2628593,2628915,2628362	WP_010950935.1	glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX	85.0	29.5	64.5
MGA_2518	LOCUS_25150	sequence1:2644713..2645006(-)	frameshift,internal_stop_codon	2644431..2644433(-),2645011..2645013(-)	2644961,2644930,2644708,2644756,2645001,2644491,2644573	WP_003401890.1	hypothetical protein	83.5	26.8	59.3
MGA_2524	LOCUS_25210	sequence1:2651000..2651905(+)	partial			WP_197492487.1	DUF4185 domain-containing protein	100.0	56.4	93.0
MGA_2526	LOCUS_25230	sequence1:2652871..2653008(+)	frameshift,internal_stop_codon	2653007..2653009(+),2652687..2652689(+),2652811..2652813(+),2652588..2652590(+),2652808..2652810(+),2653025..2653027(+)	2652626,2652755,2652822,2653180,2653036	WP_003401910.1	FAD-binding oxidoreductase	100.0	11.5	66.7
MGA_2531	LOCUS_25280	sequence1:2658978..2659211(+)	frameshift,internal_stop_codon	2658732..2658734(+),2658711..2658713(+)	2658960,2658911	WP_010908933.1	hypothetical protein	84.4	41.4	83.1
MGA_2533	LOCUS_25300	sequence1:2660429..2660773(+)	frameshift,internal_stop_codon	2660463..2660465(+),2660949..2660951(+),2660850..2660852(+),2660925..2660927(+)	2660489,2660738,2660981	WP_011730863.1	xanthine dehydrogenase family protein molybdopterin-binding subunit	71.1	10.7	60.7
MGA_2539	LOCUS_25360	sequence1:2663914..2664279(+)	partial			WP_003401751.1	hypothetical protein	100.0	65.1	83.5
MGA_2544	LOCUS_25410	sequence1:2673321..2673788(-)	frameshift,internal_stop_codon	2673095..2673097(-)	2673104,2673314,2673190,2673350,2673117	WP_003898400.1	UDP-glucose/GDP-mannose dehydrogenase family protein	94.2	33.0	56.2
MGA_2550	LOCUS_25470	sequence1:2679528..2679752(-)	internal_stop_codon	2679870..2679872(-),2679987..2679989(-),2679864..2679866(-),2679774..2679776(-),2679867..2679869(-)		WP_003401621.1	family 16 glycosylhydrolase	98.6	24.8	67.1
MGA_2553	LOCUS_25500	sequence1:2683508..2683882(-)	frameshift,internal_stop_codon	2684066..2684068(-)	2683460,2683941,2683511,2683913,2684050,2683987,2683637,2683574,2683541,2683355	WP_003401607.1	Hsp70 family protein	63.7	12.4	50.0
MGA_2555	LOCUS_25520	sequence1:2685397..2685600(+)	partial			WP_041323318.1	WhiB family transcriptional regulator	73.1	42.2	71.4
MGA_2561	LOCUS_25580	sequence1:2690052..2690456(+)	frameshift,internal_stop_codon	2690464..2690466(+)	2689840,2690384,2690368,2689999	WP_003401544.1	sulfatase	78.4	23.2	48.1
MGA_2562	LOCUS_25590	sequence1:2692001..2692258(+)	frameshift,internal_stop_codon	2692444..2692446(+),2691908..2691910(+),2692422..2692424(+),2692019..2692021(+),2691829..2691831(+)	2691762,2691858,2692082,2692024,2692121,2692427	WP_003898396.1	alpha/beta fold hydrolase	85.9	18.5	47.3
MGA_2572	LOCUS_25690	sequence1:2698684..2699103(-)	partial			WP_005098619.1	PPE family protein	98.6	31.2	41.5
MGA_2576	LOCUS_25730	sequence1:2705102..2706727(-)	frameshift		2706983	WP_010908950.1	type VII secretion AAA-ATPase EccA	99.8	84.4	93.9
MGA_2581	LOCUS_25780	sequence1:2713224..2713700(+)	partial			WP_003401373.1	ABC transporter substrate-binding protein	84.2	40.6	64.9
MGA_2595	LOCUS_25920	sequence1:2726451..2726633(-)	frameshift,internal_stop_codon	2726381..2726383(-),2726194..2726196(-),2726315..2726317(-),2726387..2726389(-),2726478..2726480(-),2726905..2726907(-)	2726883,2726435,2726783,2726504,2726729,2726841,2726239	WP_003401336.1	nitrite reductase large subunit NirB	70.0	4.9	78.6
MGA_2598	LOCUS_25950	sequence1:2730088..2730234(+)	internal_stop_codon	2729809..2729811(+),2729980..2729982(+),2730064..2730066(+),2729983..2729985(+)		WP_003401324.1	succinate dehydrogenase membrane anchor subunit	79.2	13.9	68.4
MGA_2599	LOCUS_25960	sequence1:2730404..2730730(+)	frameshift,internal_stop_codon	2730944..2730946(+),2730735..2730737(+),2730777..2730779(+),2731016..2731018(+)	2730289,2730728,2730825,2730410,2730797	WP_003401322.1	fumarate reductase/succinate dehydrogenase flavoprotein subunit	96.3	16.1	76.0
MGA_2603	LOCUS_26000	sequence1:2737483..2737734(-)	frameshift		2737497,2737699	WP_172591982.1	acetyl-CoA C-acetyltransferase	84.3	16.1	84.3
MGA_2604	LOCUS_26010	sequence1:2737661..2738065(-)	frameshift		2738144,2738113,2737698,2737496,2738189	WP_172591982.1	acetyl-CoA C-acetyltransferase	91.0	28.9	83.3
MGA_2612	LOCUS_26090	sequence1:2749859..2750131(+)	frameshift,internal_stop_codon	2749855..2749857(+),2750131..2750133(+),2749600..2749602(+),2749804..2749806(+)	2749689,2749635,2750166	WP_003401625.1	glycerophosphodiester phosphodiesterase	100.0	35.2	51.1
MGA_2621	LOCUS_26180	sequence1:2765186..2765461(+)	frameshift,internal_stop_codon	2765057..2765059(+),2764970..2764972(+),2765453..2765455(+)	2765153,2765605,2765542,2765418,2765166,2764950,2765494,2765274,2765116	WP_003899865.1	aldehyde dehydrogenase	63.7	11.3	67.2
MGA_2626	LOCUS_26230	sequence1:2769820..2770005(+)	frameshift,internal_stop_codon	2770049..2770051(+),2770121..2770123(+),2770241..2770243(+)	2769617,2770002,2770054,2769654,2770171,2770141	WP_010950356.1	fatty-acid--CoA ligase FadD5	100.0	10.8	65.6
MGA_2644	LOCUS_26410	sequence1:2791676..2792254(-)	partial			WP_010907524.1	polyketide synthase Pks13	96.4	10.4	84.9
MGA_2646	LOCUS_26430	sequence1:2794634..2794981(+)	frameshift		2794611,2794547,2794574,2794791	WP_172591936.1	metal-sensitive transcriptional regulator	46.1	43.1	73.6
MGA_2649	LOCUS_26460	sequence1:2797678..2798022(+)	frameshift,internal_stop_codon	2797431..2797433(+),2798272..2798274(+),2797671..2797673(+),2798022..2798024(+)	2798069,2797589,2797496,2798153,2798234,2798283,2797423	WP_003908489.1	molybdopterin oxidoreductase family protein	99.1	15.1	68.1
MGA_2660	LOCUS_26570	sequence1:2812281..2812472(-)	frameshift		2812458,2812334	WP_003401202.1	NYN domain-containing protein	66.7	17.4	78.6
MGA_2662	LOCUS_26590	sequence1:2815163..2815357(+)	frameshift		2815321,2815158	WP_003401208.1	hypothetical protein	100.0	12.8	50.0
MGA_2664	LOCUS_26610	sequence1:2818961..2819302(+)	partial			WP_003900829.1	fatty-acid--CoA ligase FadD4	69.9	14.7	59.5
MGA_2665	LOCUS_26620	sequence1:2820607..2820855(-)	partial			WP_003902894.1	acyl-CoA dehydrogenase family protein	45.1	9.5	73.0
MGA_2667	LOCUS_26640	sequence1:2822360..2822590(+)	frameshift,internal_stop_codon	2822216..2822218(+)	2822139	WP_011726790.1	CoA transferase	85.5	17.4	60.0
MGA_2669	LOCUS_26660	sequence1:2823603..2823788(-)	frameshift,internal_stop_codon	2823365..2823367(-),2823557..2823559(-),2823485..2823487(-)	2823553,2823953,2823605,2823990,2823466,2823436	WP_010950356.1	fatty-acid--CoA ligase FadD5	100.0	10.8	65.6
MGA_2671	LOCUS_26680	sequence1:2825641..2825790(-)	frameshift,internal_stop_codon	2825851..2825853(-)	2825784,2826025,2826061	WP_041323537.1	SRPBCC family protein	95.9	32.2	89.4
MGA_2672	LOCUS_26690	sequence1:2825852..2826091(-)	frameshift,internal_stop_codon	2825851..2825853(-)	2825784,2826025,2826061	WP_041323537.1	SRPBCC family protein	100.0	52.1	68.4
MGA_2677	LOCUS_26740	sequence1:2831320..2831541(-)	frameshift,internal_stop_codon	2831599..2831601(-)	2831427,2831466,2831690,2831662,2831487	WP_003401044.1	TetR/AcrR family transcriptional regulator	95.9	33.2	51.3
MGA_2683	LOCUS_26800	sequence1:2841039..2841437(-)	frameshift,internal_stop_codon	2841039..2841041(-)	2841680,2841438,2841463	WP_003899829.1	class I SAM-dependent methyltransferase	97.0	40.4	57.0
MGA_2684	LOCUS_26810	sequence1:2841434..2841658(-)	frameshift		2841680,2841438,2841463	WP_003899829.1	class I SAM-dependent methyltransferase	86.5	19.6	57.8
MGA_2689	LOCUS_26860	sequence1:2848246..2848719(+)	partial			WP_010908521.1	Rv1355c family protein	100.0	21.8	91.1
MGA_2690	LOCUS_26870	sequence1:2848737..2849471(+)	partial			WP_010908520.1	EAL domain-containing protein	84.4	33.1	92.7
MGA_2691	LOCUS_26880	sequence1:2849538..2849759(-)	frameshift,internal_stop_codon	2849792..2849794(-),2849777..2849779(-),2849411..2849413(-)	2849960,2849985,2849557,2849833	WP_011726646.1	IS1634-like element IS1549 family transposase	94.5	14.1	66.7
MGA_2701	LOCUS_26980	sequence1:2855968..2856306(+)	frameshift,internal_stop_codon	2856382..2856384(+)	2856004,2856438,2856332,2856493,2856223	WP_003898599.1	response regulator transcription factor	76.8	31.4	59.3
MGA_2702	LOCUS_26990	sequence1:2856518..2856706(+)	frameshift,internal_stop_codon	2856381..2856383(+)	2856331,2856492,2856437	WP_003903189.1	response regulator transcription factor	100.0	25.1	48.4
MGA_2706	LOCUS_27030	sequence1:2859276..2859554(+)	frameshift,internal_stop_codon	2859257..2859259(+),2859218..2859220(+)	2859553,2859186,2859602,2859045,2859752,2859722,2859132	WP_011730785.1	phosphate ABC transporter permease subunit PstC	98.9	25.9	63.7
MGA_2707	LOCUS_27040	sequence1:2859609..2859917(+)	frameshift		2859968,2859600,2859750,2859720,2859838,2859551	WP_011730785.1	phosphate ABC transporter permease subunit PstC	80.4	23.9	54.1
MGA_2710	LOCUS_27070	sequence1:2862700..2863098(-)	frameshift,internal_stop_codon	2862486..2862488(-),2862567..2862569(-),2862460..2862462(-)	2862466,2863314,2862617,2862473,2863099,2863196,2862702	WP_003404316.1	LCP family protein	100.0	19.3	71.2
MGA_2711	LOCUS_27080	sequence1:2863371..2863547(-)	frameshift,internal_stop_codon	2863652..2863654(-),2863637..2863639(-)	2863315,2863197,2863733,2863097,2863546,2863405	WP_003404316.1	LCP family protein	84.5	7.2	63.3
MGA_2715	LOCUS_27120	sequence1:2868339..2868575(+)	frameshift,internal_stop_codon	2868139..2868141(+),2868079..2868081(+)	2868120,2868074,2868301,2868255	WP_003898602.1	oxygenase MpaB family protein	75.6	16.8	78.0
MGA_2722	LOCUS_27190	sequence1:2877286..2877438(-)	frameshift,internal_stop_codon	2877253..2877255(-)	2877240,2877192,2877315	WP_010908748.1	hypothetical protein	82.0	48.2	80.5
MGA_2730	LOCUS_27270	sequence1:2882715..2883008(-)	frameshift,internal_stop_codon	2882713..2882715(-)	2882867,2882764,2882837,2882727	WP_010908746.1	hypothetical protein	100.0	83.1	60.2
MGA_2734	LOCUS_27310	sequence1:2886312..2886770(+)	frameshift,internal_stop_codon	2886825..2886827(+),2886819..2886821(+),2886188..2886190(+),2886134..2886136(+),2886897..2886899(+),2886861..2886863(+)	2886659,2886644,2886069,2886310,2886989	WP_009935595.1	S-sulfocysteine synthase CysK2	70.4	28.8	62.6
MGA_2735	LOCUS_27320	sequence1:2888056..2888241(+)	frameshift,internal_stop_codon	2887900..2887902(+),2888032..2888034(+),2887933..2887935(+)	2888208	WP_011730139.1	SDR family oxidoreductase	85.2	19.4	63.5
MGA_2737	LOCUS_27340	sequence1:2892207..2892542(+)	frameshift,internal_stop_codon	2892242..2892244(+)	2892145,2892036,2892271	WP_011730097.1	acyl-CoA dehydrogenase family protein	61.3	17.1	47.1
MGA_2739	LOCUS_27360	sequence1:2892884..2893129(-)	frameshift		2893211	WP_003896243.1	acyl-CoA dehydrogenase family protein	75.3	22.4	54.1
MGA_2742	LOCUS_27390	sequence1:2896445..2896579(+)	frameshift,internal_stop_codon	2896647..2896649(+),2896412..2896414(+),2896611..2896613(+),2896578..2896580(+)	2896435,2896261,2896757	WP_003896175.1	amidohydrolase family protein	97.7	11.1	61.4
MGA_2743	LOCUS_27400	sequence1:2897207..2897452(+)	frameshift,internal_stop_codon	2897609..2897611(+),2897645..2897647(+),2897156..2897158(+),2897450..2897452(+)	2897587,2897677	WP_083087609.1	FadD3 family acyl-CoA ligase	98.8	16.8	61.2
MGA_2744	LOCUS_27410	sequence1:2898093..2898236(+)	frameshift,internal_stop_codon	2898369..2898371(+),2898297..2898299(+),2898351..2898353(+),2897827..2897829(+),2898014..2898016(+)	2898233,2898061,2897847	WP_071020870.1	FadD3 family acyl-CoA ligase	100.0	10.1	80.9
MGA_2747	LOCUS_27440	sequence1:2901364..2901606(+)	frameshift,internal_stop_codon	2901605..2901607(+)	2901489,2901553,2901332,2901610,2901884	WP_003404414.1	fatty-acid-CoA racemase	98.8	22.3	56.2
MGA_2748	LOCUS_27450	sequence1:2901650..2901907(+)	frameshift,internal_stop_codon	2901605..2901607(+),2902118..2902120(+)	2901952,2901489,2901553,2901610,2901884,2901903	WP_003404414.1	fatty-acid-CoA racemase	88.2	20.9	74.7
MGA_2750	LOCUS_27470	sequence1:2903071..2903319(-)	frameshift,internal_stop_codon	2903077..2903079(-)	2902892,2902962,2903124,2902832	WP_003404420.1	pyridoxal phosphate-dependent aminotransferase	68.3	14.1	73.2
MGA_2753	LOCUS_27500	sequence1:2907285..2907524(-)	frameshift,internal_stop_codon	2907716..2907718(-)	2907648,2907576,2907337,2907709,2907518	WP_013226545.1	FAD-dependent monooxygenase	97.5	18.9	57.1
MGA_2754	LOCUS_27510	sequence1:2908380..2908562(-)	partial			WP_010908854.1	type I polyketide synthase	53.3	1.5	93.8
MGA_2760	LOCUS_27570	sequence1:2914589..2914789(+)	frameshift		2914784,2914548,2914422,2914398,2915068,2914974,2914735	WP_011730080.1	thiolase family protein	74.2	12.9	79.6
MGA_2762	LOCUS_27590	sequence1:2916933..2917208(-)	frameshift		2917213	WP_010908739.1	helicase-associated domain-containing protein	92.3	11.2	84.5
MGA_2765	LOCUS_27620	sequence1:2920415..2920813(+)	partial			WP_003404552.1	molybdopterin synthase subunit MoaE2	68.9	78.7	49.6
MGA_2768	LOCUS_27650	sequence1:2923281..2923418(-)	frameshift,internal_stop_codon	2923606..2923608(-),2923440..2923442(-)	2923551	WP_003404566.1	YccF domain-containing protein	100.0	34.9	66.7
MGA_2771	LOCUS_27680	sequence1:2928024..2928281(-)	frameshift,internal_stop_codon	2928019..2928021(-),2928494..2928496(-),2928401..2928403(-),2927835..2927837(-),2928022..2928024(-),2928331..2928333(-),2927952..2927954(-)	2928560,2928391,2928343,2928427,2927967	WP_003408413.1	amino acid permease	98.8	17.3	58.3
MGA_2772	LOCUS_27690	sequence1:2928558..2928743(-)	frameshift,internal_stop_codon	2928401..2928403(-),2928763..2928765(-),2928331..2928333(-),2928494..2928496(-)	2928560,2928738,2928343,2928394,2928430	WP_003408413.1	amino acid permease	100.0	11.0	65.6
MGA_2773	LOCUS_27700	sequence1:2929436..2929732(+)	frameshift,internal_stop_codon	2929422..2929424(+),2929232..2929234(+),2929362..2929364(+),2929389..2929391(+),2929416..2929418(+)	2929842,2929730,2929403,2929261	WP_014878423.1	glutathione S-transferase C-terminal domain-containing protein	100.0	30.0	67.6
MGA_2775	LOCUS_27720	sequence1:2930429..2931730(-)	partial			WP_162618284.1	MFS transporter	96.5	73.6	92.1
MGA_2778	LOCUS_27750	sequence1:2933125..2933502(-)	partial			WP_010908732.1	DUF2530 domain-containing protein	61.6	84.6	75.3
MGA_2780	LOCUS_27770	sequence1:2934459..2934644(+)	frameshift,internal_stop_codon	2934646..2934648(+),2934658..2934660(+)	2934212,2934917,2934408,2934321,2934868,2934837,2934266,2934429	WP_003404610.1	RNA methyltransferase	100.0	21.2	65.6
MGA_2781	LOCUS_27780	sequence1:2935136..2935342(+)	frameshift,internal_stop_codon	2935066..2935068(+)	2935080,2935137	WP_003404614.1	DUF2537 domain-containing protein	51.5	37.2	77.1
MGA_2786	LOCUS_27830	sequence1:2940426..2940632(-)	frameshift,internal_stop_codon	2940425..2940427(-),2940398..2940400(-),2940380..2940382(-)	2940694	WP_003404633.1	VOC family protein	100.0	44.7	67.6
MGA_2787	LOCUS_27840	sequence1:2940960..2941547(-)	frameshift,internal_stop_codon	2941210..2941212(-)	2941225,2941562,2941155,2941661	WP_003898633.1	citrate synthase 2	79.0	41.0	58.7
MGA_2791	LOCUS_27880	sequence1:2945827..2946030(+)	frameshift,internal_stop_codon	2945824..2945826(+),2945620..2945622(+),2945758..2945760(+)	2945573	WP_003401347.1	PPE family protein	89.6	11.5	50.0
MGA_2796	LOCUS_27930	sequence1:2953503..2953676(-)	frameshift,internal_stop_codon	2953503..2953505(-)	2953360,2953481,2953285,2953638	WP_011031577.1	FAD-binding dehydrogenase	71.9	7.4	63.4
MGA_2797	LOCUS_27940	sequence1:2953764..2953940(+)	frameshift,internal_stop_codon	2953939..2953941(+)	2953953,2954035,2953860,2954020	WP_047314267.1	TetR/AcrR family transcriptional regulator	46.6	13.4	88.9
MGA_2798	LOCUS_27950	sequence1:2954075..2954317(+)	frameshift,internal_stop_codon	2953939..2953941(+)	2953953,2954035,2953860,2954020,2954317	WP_047314267.1	TetR/AcrR family transcriptional regulator	100.0	39.8	83.8
MGA_2803	LOCUS_28000	sequence1:2957926..2958141(+)	frameshift		2957698,2958123,2958207,2957954	WP_003404705.1	MBL fold metallo-hydrolase	81.7	15.6	74.1
MGA_2804	LOCUS_28010	sequence1:2958664..2958939(+)	frameshift,internal_stop_codon	2958937..2958939(+),2958539..2958541(+),2958958..2958960(+),2958943..2958945(+)	2958796,2959109,2958598,2959035,2959084,2959149	WP_015287949.1	serine hydrolase	86.8	14.1	39.2
MGA_2805	LOCUS_28020	sequence1:2959457..2959609(+)	frameshift,internal_stop_codon	2959409..2959411(+),2959631..2959633(+),2959361..2959363(+),2959607..2959609(+)	2959824	WP_003898639.1	cation-translocating P-type ATPase	98.0	6.1	65.3
MGA_2806	LOCUS_28030	sequence1:2959567..2959866(+)	frameshift,internal_stop_codon	2959409..2959411(+),2959631..2959633(+),2959361..2959363(+),2959607..2959609(+)	2959824,2959890,2959947,2960068	WP_011730674.1	cation-translocating P-type ATPase	61.6	7.7	59.0
MGA_2807	LOCUS_28040	sequence1:2960192..2960620(+)	frameshift,internal_stop_codon	2960168..2960170(+),2960618..2960620(+),2960144..2960146(+)	2960704,2960066,2959948,2960124	WP_003898639.1	cation-translocating P-type ATPase	83.1	15.2	62.8
MGA_2808	LOCUS_28050	sequence1:2960752..2960976(+)	frameshift,internal_stop_codon	2960975..2960977(+),2960618..2960620(+),2961159..2961161(+),2961186..2961188(+)	2961167,2960701,2961079	WP_005113370.1	cation-translocating P-type ATPase	97.3	9.0	70.8
MGA_2809	LOCUS_28060	sequence1:2961309..2961596(+)	frameshift,internal_stop_codon	2961185..2961187(+),2961296..2961298(+),2961158..2961160(+),2961299..2961301(+)	2961346,2961458,2961226,2961054,2961166	WP_003898639.1	cation-translocating P-type ATPase	98.9	11.8	36.2
MGA_2810	LOCUS_28070	sequence1:2961690..2961878(+)	partial			WP_010908719.1	antitoxin	67.7	75.0	76.2
MGA_2811	LOCUS_28080	sequence1:2961883..2962329(+)	frameshift		2962320,2962341	WP_197492508.1	SRPBCC family protein	98.6	83.9	90.4
MGA_2815	LOCUS_28120	sequence1:2972143..2972508(-)	frameshift,internal_stop_codon	2972141..2972143(-)	2972440,2972226,2972165,2972486,2972230,2971990,2972510	WP_003403001.1	phosphoribosyltransferase family protein	81.8	23.0	52.3
MGA_2816	LOCUS_28130	sequence1:2972502..2973278(-)	frameshift		2972226,2972486,2972230,2972440,2972510	WP_003403001.1	phosphoribosyltransferase family protein	89.5	52.1	71.9
MGA_2823	LOCUS_28200	sequence1:2979475..2979723(+)	frameshift,internal_stop_codon	2979224..2979226(+),2979389..2979391(+),2979374..2979376(+),2979722..2979724(+),2979728..2979730(+)	2979784,2979872,2979210,2979487	WP_003402998.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	98.8	11.6	61.7
MGA_2825	LOCUS_28220	sequence1:2982492..2982911(-)	frameshift		2983088,2982641,2982916,2983174,2982891,2983116	WP_003404769.1	SDR family oxidoreductase	59.7	32.7	69.8
MGA_2831	LOCUS_28280	sequence1:2987122..2987277(-)	frameshift,internal_stop_codon	2987121..2987123(-),2987298..2987300(-)	2987505,2987349	WP_003404795.1	Ku protein	96.1	17.9	59.2
MGA_2832	LOCUS_28290	sequence1:2987828..2988202(-)	frameshift,internal_stop_codon	2988274..2988276(-)	2988448,2988306,2988213,2988186,2988429	WP_011730629.1	carbohydrate kinase	59.7	25.2	49.4
MGA_2834	LOCUS_28310	sequence1:2990269..2990814(+)	frameshift,internal_stop_codon	2990254..2990256(+),2990113..2990115(+),2990107..2990109(+)	2990679	WP_003898655.1	ATP-dependent DNA ligase	75.7	18.1	62.0
MGA_2837	LOCUS_28340	sequence1:2992013..2992486(+)	frameshift,internal_stop_codon	2991756..2991758(+)	2992564,2991830,2991965,2991803,2992604,2992461,2991742	WP_003404801.1	fumarylacetoacetate hydrolase family protein	97.5	22.8	54.2
MGA_2847	LOCUS_28440	sequence1:3004264..3004782(+)	frameshift		3004776,3004993,3004824,3004950	WP_003901262.1	DUF881 domain-containing protein	98.8	56.4	53.2
MGA_2848	LOCUS_28450	sequence1:3004969..3005241(+)	frameshift		3004779,3004827,3004950,3004996	WP_003901262.1	DUF881 domain-containing protein	71.1	20.8	67.2
MGA_2849	LOCUS_28460	sequence1:3005318..3005587(+)	frameshift		3005518,3005500,3005334,3005303	WP_003899037.1	small basic family protein	94.4	69.4	72.6
MGA_2850	LOCUS_28470	sequence1:3005777..3006100(+)	frameshift,internal_stop_codon	3006231..3006233(+)	3006296,3006169,3006052,3006332	WP_003899038.1	DUF881 domain-containing protein	96.3	36.0	63.8
MGA_2856	LOCUS_28530	sequence1:3009914..3010099(+)	partial			WP_003902191.1	hypothetical protein	67.2	48.2	85.4
MGA_2861	LOCUS_28580	sequence1:3018839..3019027(-)	frameshift,internal_stop_codon	3019266..3019268(-),3018839..3018841(-)	3019100	WP_003409281.1	hemolysin family protein	95.2	16.9	69.5
MGA_2862	LOCUS_28590	sequence1:3019266..3019439(-)	frameshift,internal_stop_codon	3019265..3019267(-)	3019099,3019438	WP_003409281.1	hemolysin family protein	100.0	16.3	75.4
MGA_2863	LOCUS_28600	sequence1:3019415..3019702(-)	frameshift,internal_stop_codon	3019264..3019266(-),3019738..3019740(-)	3019788,3019437	WP_003409281.1	hemolysin family protein	92.6	25.2	61.4
MGA_2864	LOCUS_28610	sequence1:3020015..3020224(-)	frameshift		3020240,3020244,3020052,3019943,3020089	WP_005079373.1	hemolysin family protein	65.2	10.6	62.5
MGA_2865	LOCUS_28620	sequence1:3020236..3020598(-)	frameshift,internal_stop_codon	3020239..3020241(-)	3020088,3020241,3020731,3020051	WP_003899046.1	hemolysin family protein	99.2	25.7	68.9
MGA_2866	LOCUS_28630	sequence1:3020564..3020872(-)	frameshift		3020731,3020900	WP_003409282.1	hemolysin family protein	50.0	12.1	70.9
MGA_2867	LOCUS_28640	sequence1:3020814..3021206(-)	frameshift		3020731,3020918	WP_003899046.1	hemolysin family protein	81.5	23.3	62.3
MGA_2874	LOCUS_28710	sequence1:3028575..3028805(-)	frameshift,internal_stop_codon	3028948..3028950(-),3029050..3029052(-),3028529..3028531(-)	3028866,3028631,3028810,3028779,3028829	WP_003895075.1	LLM class F420-dependent oxidoreductase	68.4	16.8	50.0
MGA_2877	LOCUS_28740	sequence1:3031156..3031581(+)	frameshift,internal_stop_codon	3031726..3031728(+),3031678..3031680(+),3031825..3031827(+),3031581..3031583(+),3031167..3031169(+),3031629..3031631(+)	3031181,3031655,3031414,3031465,3031767,3031254,3031309	WP_003409329.1	ABC transporter permease	89.4	47.7	47.6
MGA_2878	LOCUS_28750	sequence1:3032220..3032594(+)	frameshift,internal_stop_codon	3032746..3032748(+),3032212..3032214(+),3032851..3032853(+)	3032738,3032695,3032502,3032103,3032054	WP_003910464.1	sulfate/molybdate ABC transporter ATP-binding protein	71.8	22.2	51.7
MGA_2882	LOCUS_28790	sequence1:3035637..3035915(-)	frameshift,internal_stop_codon	3035637..3035639(-)	3035928,3036169,3035615	WP_003899053.1	type II CAAX endopeptidase family protein	85.9	34.4	65.9
MGA_2883	LOCUS_28800	sequence1:3036845..3037030(-)	frameshift,internal_stop_codon	3037171..3037173(-),3036790..3036792(-)	3037008,3036817,3036981,3036854,3037053	WP_003899055.1	FAD-dependent oxidoreductase	93.4	12.7	56.1
MGA_2885	LOCUS_28820	sequence1:3038024..3038362(-)	frameshift,internal_stop_codon	3038011..3038013(-),3037963..3037965(-)	3037896,3037938,3038059	WP_003409378.1	hypothetical protein	71.4	37.2	63.8
MGA_2887	LOCUS_28840	sequence1:3038909..3039064(-)	frameshift,internal_stop_codon	3039136..3039138(-)	3039075	WP_010908689.1	nitroreductase/quinone reductase family protein	86.3	50.6	68.2
MGA_2889	LOCUS_28860	sequence1:3041501..3041713(-)	frameshift,internal_stop_codon	3041876..3041878(-)	3041729,3041818,3041963,3041751	WP_011729172.1	alpha-amylase family protein	60.0	9.7	64.3
MGA_2890	LOCUS_28870	sequence1:3042249..3042566(-)	frameshift,internal_stop_codon	3042203..3042205(-),3042179..3042181(-),3042603..3042605(-),3042161..3042163(-)	3042256,3042054,3042584,3042665,3042298,3042094	WP_011729172.1	alpha-amylase family protein	84.8	19.8	53.9
MGA_2892	LOCUS_28890	sequence1:3044433..3044681(+)	frameshift,internal_stop_codon	3044680..3044682(+)	3044349,3044435,3044389,3044217,3044171,3044877	WP_010908684.1	hydrogen peroxide-inducible genes activator	100.0	26.4	85.4
MGA_2893	LOCUS_28900	sequence1:3045209..3045430(+)	frameshift,internal_stop_codon	3045444..3045446(+),3045429..3045431(+),3045174..3045176(+),3045621..3045623(+),3045657..3045659(+)	3045066,3045115,3045148	WP_003904723.1	EthD domain-containing protein	100.0	32.5	58.1
MGA_2895	LOCUS_28920	sequence1:3046507..3046698(-)	partial			WP_003895017.1	(2Fe-2S)-binding protein	81.0	73.9	64.7
MGA_2902	LOCUS_28990	sequence1:3055230..3055442(+)	frameshift,internal_stop_codon	3055577..3055579(+),3055450..3055452(+),3055158..3055160(+),3055589..3055591(+)	3055217,3055377,3055570,3055476,3055654,3055067,3055567	WP_003899065.1	hypothetical protein	72.9	13.4	66.7
MGA_2903	LOCUS_29000	sequence1:3056951..3057283(-)	frameshift,internal_stop_codon	3057294..3057296(-)	3056739,3057356,3056879,3057393,3057080,3057465,3056794,3056924	WP_011729088.1	alcohol dehydrogenase catalytic domain-containing protein	60.0	19.5	56.1
MGA_2909	LOCUS_29060	sequence1:3060178..3060495(-)	frameshift,internal_stop_codon	3060639..3060641(-)	3060608,3060466,3060563,3060645,3060726,3060279,3060684	WP_003409518.1	nitronate monooxygenase family protein	50.5	15.2	78.9
MGA_2914	LOCUS_29110	sequence1:3065546..3065743(-)	frameshift,internal_stop_codon	3065421..3065423(-),3065508..3065510(-),3065499..3065501(-)	3065558,3065813,3065870	WP_003900427.1	sialate:H+ symport family MFS transporter	95.4	15.4	64.6
MGA_2915	LOCUS_29120	sequence1:3065868..3066062(-)	frameshift		3066075,3065813,3065870,3066103	WP_003900427.1	sialate:H+ symport family MFS transporter	98.4	14.9	82.5
MGA_2921	LOCUS_29180	sequence1:3069480..3069704(-)	frameshift,internal_stop_codon	3069479..3069481(-),3069222..3069224(-)	3069505,3069890,3069442,3069352,3069705,3069868,3069551,3069240,3069247	WP_003901285.1	catalase/peroxidase HPI	98.6	9.9	61.6
MGA_2922	LOCUS_29190	sequence1:3069882..3070184(-)	frameshift,internal_stop_codon	3070406..3070408(-),3070353..3070355(-),3070224..3070226(-),3070218..3070220(-)	3069890,3070399,3070392,3069705,3069871	WP_003901285.1	catalase/peroxidase HPI	100.0	13.6	71.3
MGA_2924	LOCUS_29210	sequence1:3071230..3071397(-)	frameshift,internal_stop_codon	3071097..3071099(-)	3071136,3071167,3071402,3071231	WP_003901285.1	catalase/peroxidase HPI	78.2	5.8	81.4
MGA_2927	LOCUS_29240	sequence1:3074874..3075125(-)	frameshift,internal_stop_codon	3075355..3075357(-),3074803..3074805(-),3074845..3074847(-),3074854..3074856(-)	3075109,3075158,3074905,3075162,3074718	WP_005112881.1	nitronate monooxygenase	77.1	19.6	54.7
MGA_2929	LOCUS_29260	sequence1:3077023..3077409(-)	frameshift,internal_stop_codon	3077582..3077584(-),3077413..3077415(-)	3077512,3077208,3077268,3077198	WP_003409570.1	medium chain dehydrogenase/reductase family protein	36.7	14.1	70.2
MGA_2931	LOCUS_29280	sequence1:3079037..3079189(+)	frameshift,internal_stop_codon	3079188..3079190(+)	3079353,3079250,3079031	WP_003409574.1	MBL fold metallo-hydrolase	96.0	19.2	52.1
MGA_2938	LOCUS_29350	sequence1:3090172..3091290(-)	frameshift		3090189	WP_010908665.1	fatty acid--CoA ligase FadD10	98.9	68.0	92.4
MGA_2948	LOCUS_29450	sequence1:3105947..3106360(-)	frameshift,internal_stop_codon	3106420..3106422(-)	3106212,3106230,3106167,3106392,3106269	WP_010908655.1	TIGR00366 family protein	46.7	63.7	53.5
MGA_2949	LOCUS_29460	sequence1:3107947..3108156(+)	frameshift,internal_stop_codon	3108424..3108426(+),3108156..3108158(+)	3108263,3107730,3107923,3107863,3107782,3108407,3107723	WP_003409680.1	fatty-acid--AMP ligase FAAL31/FadD31	97.1	10.8	71.6
MGA_2950	LOCUS_29470	sequence1:3108543..3108680(+)	frameshift,internal_stop_codon	3108422..3108424(+)	3108640,3108496,3108261,3108741,3108405,3108859,3108668	WP_003409680.1	fatty-acid--AMP ligase FAAL31/FadD31	77.8	5.6	60.0
MGA_2952	LOCUS_29490	sequence1:3109925..3110167(+)	frameshift		3110163,3109940,3110197,3109927,3109720,3109837	WP_003408551.1	hypothetical protein	92.5	30.5	58.1
MGA_2953	LOCUS_29500	sequence1:3110159..3110449(-)	frameshift,internal_stop_codon	3110485..3110487(-)	3110696,3110508,3110686	WP_003409686.1	SDR family oxidoreductase	40.6	15.3	71.8
MGA_2954	LOCUS_29510	sequence1:3112067..3112399(-)	frameshift		3112502	WP_011727413.1	GlxA family transcriptional regulator	98.2	32.2	60.2
MGA_2955	LOCUS_29520	sequence1:3112497..3113021(-)	frameshift		3112502	WP_011727413.1	GlxA family transcriptional regulator	99.4	53.4	48.6
MGA_2958	LOCUS_29550	sequence1:3116242..3116592(-)	frameshift,internal_stop_codon	3116716..3116718(-),3116830..3116832(-),3116707..3116709(-),3116652..3116654(-)	3116403,3116630,3116667,3116381,3116575	WP_003410146.1	cation diffusion facilitator family transporter	90.5	31.6	54.3
MGA_2964	LOCUS_29610	sequence1:3123739..3124143(+)	frameshift,internal_stop_codon	3124141..3124143(+)	3124248,3124306,3124379	WP_047314084.1	class I SAM-dependent methyltransferase	41.8	19.2	80.4
MGA_2965	LOCUS_29620	sequence1:3124363..3124764(+)	frameshift,internal_stop_codon	3124141..3124143(+)	3124248,3124306,3124379,3124710	WP_047314084.1	class I SAM-dependent methyltransferase	84.2	38.4	75.0
MGA_2992	LOCUS_29890	sequence1:3149543..3149887(+)	frameshift,internal_stop_codon	3149531..3149533(+)	3149824,3149514,3149882	WP_011730405.1	dienelactone hydrolase family protein	84.2	35.0	56.2
MGA_2997	LOCUS_29940	sequence1:3155532..3155900(+)	frameshift,internal_stop_codon	3155524..3155526(+),3155278..3155280(+)	3155308,3155502,3155887,3155381,3155286,3156087,3155865,3156062	WP_010886139.1	5'-3' exonuclease	91.8	28.5	69.6
MGA_3005	LOCUS_30020	sequence1:3164971..3165150(+)	frameshift,internal_stop_codon	3165149..3165151(+),3164741..3164743(+),3165410..3165412(+)	3165400,3164938,3165196	WP_003912345.1	HNH endonuclease signature motif containing protein	100.0	11.9	54.8
MGA_3006	LOCUS_30030	sequence1:3166033..3166206(+)	frameshift,internal_stop_codon	3166207..3166209(+),3165952..3165954(+),3166295..3166297(+),3166219..3166221(+)	3166017,3165780,3166263,3165912,3166330,3166430	WP_010950658.1	DEAD/DEAH box helicase	96.5	5.4	76.4
MGA_3007	LOCUS_30040	sequence1:3166937..3167113(+)	frameshift,internal_stop_codon	3166909..3166911(+)	3167058,3166772,3166694,3166871	WP_010950658.1	DEAD/DEAH box helicase	69.0	3.9	75.0
MGA_3008	LOCUS_30050	sequence1:3167943..3168251(-)	frameshift,internal_stop_codon	3167942..3167944(-)	3168271	WP_003410811.1	type II toxin-antitoxin system VapC family toxin	99.0	80.6	55.2
MGA_3013	LOCUS_30100	sequence1:3173639..3173869(+)	frameshift,internal_stop_codon	3173519..3173521(+),3174012..3174014(+),3173543..3173545(+),3173868..3173870(+),3173471..3173473(+),3174135..3174137(+)	3173569,3174020,3173639	WP_011727016.1	acyl-CoA dehydrogenase family protein	93.4	17.6	60.6
MGA_3019	LOCUS_30160	sequence1:3177724..3178056(-)	partial			WP_011727365.1	alpha/beta hydrolase-fold protein	28.2	6.7	77.4
MGA_3022	LOCUS_30190	sequence1:3183021..3183320(-)	partial			WP_003899825.1	YoaK family protein	61.6	23.6	67.2
MGA_3024	LOCUS_30210	sequence1:3184728..3184979(-)	frameshift,internal_stop_codon	3185205..3185207(-),3185030..3185032(-)	3185042,3185106,3185140,3184981,3185223,3184762,3185150	WP_003400893.1	maltose alpha-D-glucosyltransferase	88.0	12.3	60.8
MGA_3027	LOCUS_30240	sequence1:3188895..3189104(+)	frameshift,internal_stop_codon	3189118..3189120(+)	3189250,3188835,3189174,3189335,3189080,3188890,3189307	WP_003400860.1	elongation factor G-like protein EF-G2	81.2	8.4	75.0
MGA_3028	LOCUS_30250	sequence1:3190115..3190432(+)	frameshift,internal_stop_codon	3189903..3189905(+),3189873..3189875(+),3189849..3189851(+)	3190178,3190082,3190133,3189929,3190412,3190527	WP_003400860.1	elongation factor G-like protein EF-G2	70.5	10.4	67.6
MGA_3029	LOCUS_30260	sequence1:3191528..3192181(-)	frameshift,internal_stop_codon	3192324..3192326(-)	3192224,3191548	WP_010909016.1	FadD7 family fatty acid--CoA ligase	97.2	38.5	85.3
MGA_3030	LOCUS_30270	sequence1:3192324..3192623(-)	frameshift,internal_stop_codon	3192324..3192326(-)	3192227	WP_010909016.1	FadD7 family fatty acid--CoA ligase	100.0	18.1	84.8
MGA_3033	LOCUS_30300	sequence1:3193970..3194182(+)	frameshift,internal_stop_codon	3193682..3193684(+),3193799..3193801(+)	3193962,3193813	WP_003400858.1	oxalyl-CoA decarboxylase	64.3	7.7	64.4
MGA_3045	LOCUS_30420	sequence1:3208132..3208401(+)	frameshift		3208093	WP_011730669.1	cyclohexanecarboxylate-CoA ligase	74.2	13.3	52.9
MGA_3049	LOCUS_30460	sequence1:3219831..3220025(+)	frameshift,internal_stop_codon	3220138..3220140(+),3220247..3220249(+)	3219992,3219820,3220239	WP_003899378.1	ATP-binding cassette domain-containing protein	82.8	16.1	66.0
MGA_3051	LOCUS_30480	sequence1:3222368..3222598(+)	frameshift,internal_stop_codon	3222767..3222769(+),3222310..3222312(+),3222632..3222634(+)	3222369,3222345,3222576,3222287	WP_010877149.1	hypothetical protein	90.8	18.8	39.1
MGA_3066	LOCUS_30630	sequence1:3242353..3242703(-)	frameshift		3242409	WP_041323592.1	DUF5318 family protein	88.8	71.5	89.3
MGA_3070	LOCUS_30670	sequence1:3245918..3246193(+)	frameshift,internal_stop_codon	3246269..3246271(+)	3245926,3246217,3246313,3246356,3246102,3245782,3245851,3245951	WP_003400489.1	alpha/beta hydrolase	54.9	16.8	54.0
MGA_3072	LOCUS_30690	sequence1:3248452..3248637(+)	frameshift,internal_stop_codon	3248851..3248853(+),3248673..3248675(+),3248918..3248920(+)	3248720,3248408,3248898,3248754,3248324,3248627,3248648	WP_011731623.1	ABC transporter substrate-binding protein/permease	91.8	9.5	57.1
MGA_3075	LOCUS_30720	sequence1:3249607..3249810(+)	frameshift,internal_stop_codon	3249596..3249598(+)	3249472,3249357	WP_011731623.1	ABC transporter substrate-binding protein/permease	80.6	9.2	59.3
MGA_3076	LOCUS_30730	sequence1:3250231..3250497(+)	frameshift,internal_stop_codon	3249975..3249977(+),3250065..3250067(+),3250206..3250208(+),3250197..3250199(+)	3250476,3250286	WP_011731624.1	amino acid ABC transporter ATP-binding protein	67.0	24.5	51.7
MGA_3079	LOCUS_30760	sequence1:3253709..3254170(+)	partial			WP_162618346.1	NUDIX hydrolase	100.0	62.7	86.3
MGA_3082	LOCUS_30790	sequence1:3261728..3262738(+)	frameshift		3262726	WP_010909042.1	thioredoxin-disulfide reductase	99.4	72.9	85.9
MGA_3083	LOCUS_30800	sequence1:3262752..3263105(+)	frameshift		3262729	WP_010909042.1	thioredoxin-disulfide reductase	100.0	25.5	89.7
MGA_3086	LOCUS_30830	sequence1:3264452..3264883(-)	frameshift		3264490	WP_010909044.1	hypothetical protein	89.5	49.4	96.1
MGA_3089	LOCUS_30860	sequence1:3268456..3268947(-)	frameshift		3268933	WP_010909048.1	protein jag	96.9	81.9	83.5
