{ "tc_result": [ { "organism_name": "Corynebacterium uterequi", "strain": "strain=DSM 45634", "accession": "GCA_001021065.1", "taxid": 1072256, "species_taxid": 1072256, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 805, "total_fragments": 806, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium doosanense", "strain": "strain=CAU 212", "accession": "GCA_000767055.1", "taxid": 1121358, "species_taxid": 1121358, "relation_to_type": "type", "validated": true, "ani": 79.248, "matched_fragments": 321, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium yudongzhengii", "strain": "strain=2183", "accession": "GCA_003065405.1", "taxid": 2080740, "species_taxid": 2080740, "relation_to_type": "type", "validated": true, "ani": 79.1164, "matched_fragments": 314, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium senegalense", "strain": "strain=Marseille-P4329", "accession": "GCA_900411315.1", "taxid": 2080750, "species_taxid": 2080750, "relation_to_type": "type", "validated": true, "ani": 79.0818, "matched_fragments": 268, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium doosanense", "strain": "strain=DSM 45436", "accession": "GCA_000372245.1", "taxid": 1121358, "species_taxid": 1121358, "relation_to_type": "type", "validated": true, "ani": 78.924, "matched_fragments": 321, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=YIM 70093 = DSM 44683", "accession": "GCA_000341345.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 78.8926, "matched_fragments": 306, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium pollutisoli", "strain": "strain=VDS11", "accession": "GCA_900177745.1", "taxid": 1610489, "species_taxid": 1610489, "relation_to_type": "type", "validated": true, "ani": 78.8415, "matched_fragments": 301, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium maris", "strain": "strain=DSM 45190", "accession": "GCA_000442645.1", "taxid": 575200, "species_taxid": 575200, "relation_to_type": "type", "validated": true, "ani": 78.7603, "matched_fragments": 307, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium humireducens", "strain": "strain=NBRC 106098", "accession": "GCA_001571025.1", "taxid": 1223514, "species_taxid": 1223514, "relation_to_type": "type", "validated": true, "ani": 78.7377, "matched_fragments": 302, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium tapiri", "strain": "strain=LMG 28165", "accession": "GCA_006334925.1", "taxid": 1448266, "species_taxid": 1448266, "relation_to_type": "type", "validated": true, "ani": 78.5835, "matched_fragments": 233, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium halotolerans", "strain": "strain=DSM 44683", "accession": "GCA_000688435.1", "taxid": 225326, "species_taxid": 225326, "relation_to_type": "type", "validated": true, "ani": 78.572, "matched_fragments": 291, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium haemomassiliense", "strain": "strain=Marseille-Q3615", "accession": "GCA_013978595.1", "taxid": 2754726, "species_taxid": 2754726, "relation_to_type": "type", "validated": true, "ani": 78.5396, "matched_fragments": 257, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium ihumii", "strain": "strain=GD7", "accession": "GCA_000403725.2", "taxid": 1232427, "species_taxid": 1232427, "relation_to_type": "type", "validated": true, "ani": 78.3207, "matched_fragments": 213, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium lipophiloflavum", "strain": "strain=DSM 44291", "accession": "GCA_000159635.1", "taxid": 161889, "species_taxid": 161889, "relation_to_type": "type", "validated": true, "ani": 78.3143, "matched_fragments": 207, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium afermentans subsp. lipophilum", "strain": "strain=CCUG 32105", "accession": "GCA_015351335.1", "taxid": 144184, "species_taxid": 38286, "relation_to_type": "type", "validated": true, "ani": 78.2419, "matched_fragments": 226, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium urinipleomorphum", "strain": "strain=Marseille-P2799", "accession": "GCA_900155535.1", "taxid": 1852380, "species_taxid": 1852380, "relation_to_type": "type", "validated": true, "ani": 78.1465, "matched_fragments": 177, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium renale", "strain": "strain=NCTC7448", "accession": "GCA_900478035.1", "taxid": 1724, "species_taxid": 1724, "relation_to_type": "type", "validated": true, "ani": 77.8575, "matched_fragments": 127, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella endophytica", "strain": "strain=KE2-3", "accession": "GCA_003427025.1", "taxid": 1623398, "species_taxid": 1623398, "relation_to_type": "type", "validated": true, "ani": 75.6786, "matched_fragments": 128, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella ureilytica", "strain": "strain=KC603", "accession": "GCA_004348545.1", "taxid": 2530374, "species_taxid": 2530374, "relation_to_type": "type", "validated": true, "ani": 75.6512, "matched_fragments": 128, "total_fragments": 806, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001021065.1", "gtdb_species": "s__Corynebacterium uterequi", "ani": 100.0, "matched_fragments": 805, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_000767055.1", "gtdb_species": "s__Corynebacterium doosanense", "ani": 79.2154, "matched_fragments": 321, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000819445.1", "gtdb_species": "s__Corynebacterium humireducens", "ani": 79.1887, "matched_fragments": 300, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.80", "min_intra_species_ani": "97.60", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003065405.1", "gtdb_species": "s__Corynebacterium yudongzhengii", "ani": 79.1387, "matched_fragments": 314, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900411315.1", "gtdb_species": "s__Corynebacterium senegalense", "ani": 79.0885, "matched_fragments": 268, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000341345.1", "gtdb_species": "s__Corynebacterium halotolerans", "ani": 78.8757, "matched_fragments": 305, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900177745.1", "gtdb_species": "s__Corynebacterium pollutisoli", "ani": 78.8415, "matched_fragments": 301, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000442645.1", "gtdb_species": "s__Corynebacterium maris", "ani": 78.7509, "matched_fragments": 308, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006334925.1", "gtdb_species": "s__Corynebacterium tapiri", "ani": 78.6002, "matched_fragments": 232, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013978595.1", "gtdb_species": "s__Corynebacterium haemomassiliense", "ani": 78.5428, "matched_fragments": 257, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000577555.1", "gtdb_species": "s__Corynebacterium jeddahense", "ani": 78.3439, "matched_fragments": 229, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000159635.1", "gtdb_species": "s__Corynebacterium lipophiloflavum", "ani": 78.3143, "matched_fragments": 207, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_012838985.1", "gtdb_species": "s__Corynebacterium sp012838985", "ani": 78.2525, "matched_fragments": 240, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015351335.1", "gtdb_species": "s__Corynebacterium lipophilum", "ani": 78.2419, "matched_fragments": 226, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002339505.1", "gtdb_species": "s__Corynebacterium sp002339505", "ani": 78.2308, "matched_fragments": 211, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_900156035.1", "gtdb_species": "s__Corynebacterium afermentans", "ani": 78.1588, "matched_fragments": 210, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.27", "min_intra_species_ani": "97.60", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_002563965.1", "gtdb_species": "s__Corynebacterium renale", "ani": 77.7173, "matched_fragments": 126, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.02", "min_intra_species_ani": "98.07", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_003427025.1", "gtdb_species": "s__Jiangella endophytica", "ani": 75.6717, "matched_fragments": 129, "total_fragments": 806, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Jiangellales;f__Jiangellaceae;g__Jiangella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }