# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00020	sequence1:550..1353(+)	internal_stop_codon	415..417(+)		WP_011182898.1	chromosomal replication initiator protein DnaA	99.3	59.8	42.1
MGA_4	LOCUS_00040	sequence1:2820..2939(+)	internal_stop_codon	2937..2939(+)		WP_138821006.1	DNA topoisomerase IV subunit B	100.0	5.7	82.1
MGA_5	LOCUS_00050	sequence1:3168..4511(+)	internal_stop_codon	2937..2939(+),4509..4511(+)		WP_011166217.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.6	69.2	58.2
MGA_6	LOCUS_00060	sequence1:4566..4748(+)	internal_stop_codon	4509..4511(+)		WP_003723769.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	9.3	63.3
MGA_8	LOCUS_00080	sequence1:7235..7621(+)	internal_stop_codon	7619..7621(+)		WP_011166277.1	serine--tRNA ligase	100.0	30.8	40.8
MGA_9	LOCUS_00090	sequence1:7769..8254(+)	internal_stop_codon	8252..8254(+),7619..7621(+)		WP_010880145.1	serine--tRNA ligase	100.0	37.9	63.4
MGA_10	LOCUS_00100	sequence1:8255..8503(+)	internal_stop_codon	8252..8254(+)		WP_002295265.1	serine--tRNA ligase	98.8	19.1	65.4
MGA_15	LOCUS_00150	sequence1:11538..11831(+)	frameshift,internal_stop_codon	11829..11831(+),11535..11537(+)	11425	WP_003020731.1	recombination mediator RecR	99.0	48.0	39.6
MGA_16	LOCUS_00160	sequence1:11959..12144(+)	internal_stop_codon	12142..12144(+)		WP_011166257.1	dTMP kinase	96.7	27.7	57.6
MGA_17	LOCUS_00170	sequence1:12184..12606(+)	internal_stop_codon	12142..12144(+)		WP_011166257.1	dTMP kinase	95.0	61.0	47.4
MGA_18	LOCUS_00180	sequence1:12596..13279(+)	partial			WP_011183571.1	DNA polymerase III subunit delta'	76.7	66.0	31.0
MGA_26	LOCUS_00260	sequence1:19011..19340(+)	frameshift,internal_stop_codon	19410..19412(+),18821..18823(+),19338..19340(+)	18979	WP_011674999.1	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	100.0	33.4	60.6
MGA_27	LOCUS_00270	sequence1:19550..19783(+)	partial			WP_002386630.1	Sapep family Mn(2+)-dependent dipeptidase	97.4	17.4	49.3
MGA_29	LOCUS_00290	sequence1:20364..20582(+)	internal_stop_codon	20358..20360(+)		WP_000686962.1	dipeptidase	94.4	15.3	44.1
MGA_34	LOCUS_00340	sequence1:23368..24294(+)	partial			WP_011182916.1	ABC transporter ATP-binding protein	90.3	46.2	70.6
MGA_38	LOCUS_00380	sequence1:26447..26707(+)	internal_stop_codon	26705..26707(+)		WP_011166775.1	ABC transporter permease	98.8	5.7	40.0
MGA_39	LOCUS_00390	sequence1:26789..27034(+)	internal_stop_codon	26705..26707(+),27032..27034(+)		WP_011183300.1	ABC transporter permease	93.8	5.4	40.8
MGA_41	LOCUS_00410	sequence1:28112..28561(+)	internal_stop_codon	28679..28681(+),28559..28561(+)		WP_011166775.1	ABC transporter permease	94.6	10.9	27.8
MGA_43	LOCUS_00430	sequence1:29360..29635(+)	frameshift,internal_stop_codon	29459..29461(+),29676..29678(+),29453..29455(+),29336..29338(+)	29585,29395,29476	WP_011166279.1	tRNA dihydrouridine synthase DusB	96.7	26.5	45.5
MGA_45	LOCUS_00450	sequence1:29922..30875(+)	internal_stop_codon	30873..30875(+),30882..30884(+),30927..30929(+)		WP_011182927.1	lysine--tRNA ligase	100.0	63.5	56.0
MGA_46	LOCUS_00460	sequence1:30936..31424(+)	internal_stop_codon	30873..30875(+),30882..30884(+),30927..30929(+)		WP_011166280.1	lysine--tRNA ligase	98.8	32.0	67.5
MGA_49	LOCUS_00490	sequence1:31988..32386(+)	partial			WP_002212256.1	aspartate--ammonia ligase	86.4	37.3	30.9
MGA_51	LOCUS_00510	sequence1:33248..33634(+)	partial			WP_011182977.1	30S ribosomal protein S6	100.0	43.8	43.0
MGA_52	LOCUS_00520	sequence1:33721..33867(+)	internal_stop_codon	33865..33867(+)		WP_011166237.1	single-stranded DNA-binding protein	97.9	33.6	53.1
MGA_53	LOCUS_00530	sequence1:33886..34176(+)	internal_stop_codon	33865..33867(+)		WP_003721668.1	single-stranded DNA-binding protein	94.8	59.6	36.8
MGA_55	LOCUS_00550	sequence1:34950..35324(+)	frameshift,internal_stop_codon	35487..35489(+),35532..35534(+),35322..35324(+),35535..35537(+),35325..35327(+)	34957	WP_011183548.1	dicarboxylate/amino acid:cation symporter	100.0	21.4	45.7
MGA_57	LOCUS_00570	sequence1:35724..36197(+)	frameshift,internal_stop_codon	35487..35489(+),35535..35537(+),35532..35534(+)	35609,35717	WP_011167161.1	dicarboxylate/amino acid:cation symporter	60.5	17.4	48.4
MGA_58	LOCUS_00580	sequence1:36382..36681(+)	frameshift		36288,36319	WP_003439500.1	FAD-dependent oxidoreductase	81.8	14.9	37.0
MGA_67	LOCUS_00670	sequence1:41497..41850(+)	internal_stop_codon	41848..41850(+)		WP_000583238.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	94.0	35.4	53.6
MGA_72	LOCUS_00720	sequence1:43914..44354(+)	internal_stop_codon	44352..44354(+)		WP_011183530.1	peptide chain release factor 1	99.3	39.9	54.5
MGA_73	LOCUS_00730	sequence1:44364..44990(+)	internal_stop_codon	44352..44354(+)		WP_011183530.1	peptide chain release factor 1	99.0	56.7	71.4
MGA_75	LOCUS_00750	sequence1:45212..45685(+)	internal_stop_codon	45683..45685(+),45158..45160(+)		WP_003227647.1	peptide chain release factor N(5)-glutamine methyltransferase	99.4	54.2	46.2
MGA_90	LOCUS_00900	sequence1:56668..56919(+)	frameshift,internal_stop_codon	56917..56919(+),57035..57037(+),56971..56973(+),56926..56928(+)	57055,56991	WP_004082660.1	ABC transporter permease	100.0	24.1	47.0
MGA_91	LOCUS_00910	sequence1:57115..57522(+)	internal_stop_codon	56917..56919(+),57049..57051(+),56926..56928(+),57520..57522(+),56971..56973(+),57532..57534(+)		WP_011166220.1	ABC transporter permease	98.5	15.3	48.1
MGA_93	LOCUS_00930	sequence1:58583..59278(+)	internal_stop_codon	59276..59278(+),59360..59362(+),59345..59347(+)		WP_011166219.1	ABC transporter permease	94.4	72.9	44.3
MGA_95	LOCUS_00950	sequence1:60692..62794(+)	internal_stop_codon	62792..62794(+),60497..60499(+),60407..60409(+),60656..60658(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	96.6	52.1	60.4
MGA_96	LOCUS_00960	sequence1:63023..64183(+)	internal_stop_codon	62792..62794(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	93.5	29.2	71.4
MGA_97	LOCUS_00970	sequence1:64481..65035(+)	internal_stop_codon	65033..65035(+),64274..64276(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	100.0	14.7	53.2
MGA_98	LOCUS_00980	sequence1:65036..65554(+)	internal_stop_codon	65033..65035(+),65552..65554(+)		WP_011183495.1	DNA-directed RNA polymerase subunit beta'	100.0	13.7	82.6
MGA_99	LOCUS_00990	sequence1:65558..66184(+)	internal_stop_codon	65552..65554(+),66470..66472(+),66182..66184(+)		WP_011183495.1	DNA-directed RNA polymerase subunit beta'	88.0	14.6	71.0
MGA_100	LOCUS_01000	sequence1:66272..66472(+)	internal_stop_codon	66182..66184(+),66470..66472(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	100.0	5.3	62.1
MGA_101	LOCUS_01010	sequence1:66545..67954(+)	internal_stop_codon	66470..66472(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	100.0	37.5	65.4
MGA_102	LOCUS_01020	sequence1:68312..68575(+)	internal_stop_codon	68204..68206(+)		WP_011183521.1	30S ribosomal protein S12	96.6	61.3	92.9
MGA_103	LOCUS_01030	sequence1:68620..68925(+)	internal_stop_codon	68923..68925(+)		WP_011166360.1	30S ribosomal protein S7	100.0	65.2	80.2
MGA_104	LOCUS_01040	sequence1:68962..69084(+)	internal_stop_codon	68923..68925(+)		WP_001137495.1	30S ribosomal protein S7	100.0	25.6	85.0
MGA_105	LOCUS_01050	sequence1:69122..69277(+)	internal_stop_codon	69275..69277(+),69335..69337(+),69479..69481(+)		WP_011166361.1	elongation factor G	100.0	7.4	96.1
MGA_106	LOCUS_01060	sequence1:69344..69481(+)	internal_stop_codon	69275..69277(+),69335..69337(+),69479..69481(+)		WP_000090364.1	elongation factor G	97.8	6.4	97.7
MGA_107	LOCUS_01070	sequence1:69530..70435(+)	internal_stop_codon	70433..70435(+),70643..70645(+),69335..69337(+),69275..69277(+),69479..69481(+)		WP_011183519.1	elongation factor G	100.0	43.7	71.8
MGA_108	LOCUS_01080	sequence1:70472..70645(+)	internal_stop_codon	70643..70645(+),70433..70435(+)		WP_010874584.1	elongation factor G	100.0	8.3	82.5
MGA_109	LOCUS_01090	sequence1:70685..71206(+)	internal_stop_codon	70643..70645(+),70433..70435(+)		WP_011183519.1	elongation factor G	97.1	24.4	69.6
MGA_110	LOCUS_01100	sequence1:71313..71867(+)	internal_stop_codon	71865..71867(+)		WP_011183518.1	elongation factor Tu	98.9	46.2	83.0
MGA_111	LOCUS_01110	sequence1:71880..72497(+)	internal_stop_codon	71865..71867(+)		WP_001040568.1	elongation factor Tu	100.0	52.0	78.0
MGA_112	LOCUS_01120	sequence1:72802..73311(+)	internal_stop_codon	73309..73311(+)		WP_002898080.1	LemA family protein	87.0	78.3	34.5
MGA_114	LOCUS_01140	sequence1:75283..75585(+)	internal_stop_codon	75583..75585(+),75256..75258(+),75190..75192(+)		WP_011166679.1	class I mannose-6-phosphate isomerase	100.0	32.7	58.4
MGA_115	LOCUS_01150	sequence1:75685..75912(+)	internal_stop_codon	75583..75585(+)		WP_012027535.1	mannose-6-phosphate isomerase, class I	93.3	24.3	44.7
MGA_116	LOCUS_01160	sequence1:76161..76427(+)	internal_stop_codon	76425..76427(+)		WP_005478378.1	fructose-specific PTS transporter subunit EIIC	100.0	14.1	40.9
MGA_117	LOCUS_01170	sequence1:76434..77162(+)	internal_stop_codon	76425..76427(+)		WP_011705322.1	fructose-specific PTS transporter subunit EIIC	91.3	34.5	38.8
MGA_118	LOCUS_01180	sequence1:77283..77492(+)	internal_stop_codon	77625..77627(+),77640..77642(+),77490..77492(+),77622..77624(+)		WP_005478109.1	fructose-specific PTS transporter subunit EIIC	100.0	9.8	52.2
MGA_119	LOCUS_01190	sequence1:77706..77852(+)	internal_stop_codon	77625..77627(+),77850..77852(+),77490..77492(+),77622..77624(+),77640..77642(+)		WP_005478109.1	fructose-specific PTS transporter subunit EIIC	100.0	7.6	72.9
MGA_120	LOCUS_01200	sequence1:77889..78116(+)	internal_stop_codon	77850..77852(+)		WP_011705322.1	fructose-specific PTS transporter subunit EIIC	88.0	10.4	48.5
MGA_124	LOCUS_01240	sequence1:78911..81910(+)	partial			WP_010989651.1	dihydrolipoyllysine-residue acetyltransferase	23.0	42.1	34.8
MGA_125	LOCUS_01250	sequence1:82004..82468(-)	partial			WP_164919770.1	YigZ family protein	87.7	72.6	35.0
MGA_130	LOCUS_01300	sequence1:85481..85648(+)	internal_stop_codon	85463..85465(+),85646..85648(+),85328..85330(+),85679..85681(+),85418..85420(+),85442..85444(+)		WP_003130958.1	DUF402 domain-containing protein	96.4	30.1	56.6
MGA_137	LOCUS_01370	sequence1:91283..91576(+)	frameshift,internal_stop_codon	91208..91210(+),91078..91080(+)	91122,91564,91638,91580	WP_001253339.1	DUF871 domain-containing protein	91.8	24.0	33.7
MGA_139	LOCUS_01390	sequence1:93172..93501(+)	internal_stop_codon	93145..93147(+)		WP_011167044.1	F0F1 ATP synthase subunit A	83.5	31.4	64.8
MGA_140	LOCUS_01400	sequence1:93838..94086(+)	partial			WP_011183007.1	ATP synthase subunit C	90.2	71.2	56.8
MGA_143	LOCUS_01430	sequence1:95251..96006(+)	internal_stop_codon	96004..96006(+)		WP_011183010.1	F0F1 ATP synthase subunit alpha	98.8	47.2	73.8
MGA_144	LOCUS_01440	sequence1:96007..96600(+)	internal_stop_codon	96598..96600(+),96004..96006(+),96811..96813(+)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	37.5	75.6
MGA_157	LOCUS_01570	sequence1:103589..103876(+)	internal_stop_codon	103874..103876(+)		WP_010890755.1	Cof-type HAD-IIB family hydrolase	94.7	31.4	41.1
MGA_159	LOCUS_01590	sequence1:104249..104431(+)	partial			WP_000278836.1	Cof-type HAD-IIB family hydrolase	90.0	19.8	40.7
MGA_162	LOCUS_01620	sequence1:105365..105661(+)	partial			WP_011182965.1	preprotein translocase subunit SecG	67.3	75.0	66.7
MGA_163	LOCUS_01630	sequence1:105726..107105(+)	internal_stop_codon	107103..107105(+)		WP_011167012.1	ribonuclease R	100.0	64.8	38.0
MGA_164	LOCUS_01640	sequence1:107106..107840(+)	internal_stop_codon	107103..107105(+)		WP_000391086.1	ribonuclease R	99.6	30.1	47.3
MGA_166	LOCUS_01660	sequence1:108704..109129(+)	frameshift		108681	WP_003721367.1	NCS2 family permease	74.5	24.6	48.1
MGA_167	LOCUS_01670	sequence1:109583..109768(+)	frameshift,internal_stop_codon	109767..109769(+),109377..109379(+)	109901,109550	WP_011183312.1	NCS2 family permease	98.4	11.8	43.3
MGA_171	LOCUS_01710	sequence1:112361..112618(+)	partial			WP_002797817.1	CRISPR-associated endonuclease Cas2	92.9	53.8	36.7
MGA_172	LOCUS_01720	sequence1:113225..113899(+)	internal_stop_codon	113897..113899(+)		WP_002456033.1	zinc-dependent alcohol dehydrogenase family protein	98.2	65.4	38.3
MGA_173	LOCUS_01730	sequence1:114117..114611(+)	internal_stop_codon	114609..114611(+)		WP_011183134.1	signal recognition particle-docking protein FtsY	97.6	42.2	48.8
MGA_174	LOCUS_01740	sequence1:114636..115103(+)	internal_stop_codon	114609..114611(+)		WP_000007656.1	signal recognition particle-docking protein FtsY	92.9	43.8	65.3
MGA_176	LOCUS_01760	sequence1:115434..115913(+)	internal_stop_codon	115911..115913(+)		WP_020862745.1	TIGR00282 family metallophosphoesterase	100.0	62.3	56.9
MGA_177	LOCUS_01770	sequence1:115941..116231(+)	internal_stop_codon	115911..115913(+)		WP_003245138.1	2',3'-cyclic-nucleotide 2'-phosphodiesterase	94.8	33.7	52.7
MGA_182	LOCUS_01820	sequence1:118718..118987(+)	internal_stop_codon	118985..118987(+)		WP_011166676.1	methionine adenosyltransferase	95.5	22.0	72.9
MGA_183	LOCUS_01830	sequence1:119039..119872(+)	internal_stop_codon	118985..118987(+)		WP_011166676.1	methionine adenosyltransferase	96.4	68.5	68.9
MGA_184	LOCUS_01840	sequence1:119921..120244(+)	internal_stop_codon	120308..120310(+),120242..120244(+)		WP_011166968.1	HAD family hydrolase	95.3	36.6	38.1
MGA_186	LOCUS_01860	sequence1:120846..121184(-)	internal_stop_codon	120846..120848(-),121197..121199(-),121395..121397(-)		WP_004451047.1	sulfite exporter TauE/SafE family protein	94.6	32.5	56.6
MGA_189	LOCUS_01890	sequence1:122624..122830(+)	internal_stop_codon	122828..122830(+)		WP_011183409.1	ABC transporter ATP-binding protein	100.0	19.4	76.5
MGA_190	LOCUS_01900	sequence1:122897..123316(+)	internal_stop_codon	122828..122830(+),123314..123316(+),123542..123544(+)		WP_011166424.1	spermidine/putrescine ABC transporter ATP-binding protein	99.3	39.3	67.4
MGA_192	LOCUS_01920	sequence1:124177..124383(+)	internal_stop_codon	124381..124383(+),124144..124146(+),124168..124170(+),124612..124614(+)		WP_011166425.1	ABC transporter permease	100.0	20.6	54.4
MGA_193	LOCUS_01930	sequence1:124441..124614(+)	internal_stop_codon	124381..124383(+),124168..124170(+),124612..124614(+)		WP_011183408.1	ABC transporter permease	66.7	11.5	60.5
MGA_195	LOCUS_01950	sequence1:124850..125170(+)	internal_stop_codon	125168..125170(+),124784..124786(+),125390..125392(+),125381..125383(+)		WP_011166426.1	extracellular solute-binding protein	100.0	10.2	63.2
MGA_196	LOCUS_01960	sequence1:125231..125383(+)	internal_stop_codon	125168..125170(+),125390..125392(+),125381..125383(+)		WP_011183407.1	ABC transporter permease subunit	72.0	3.3	75.0
MGA_198	LOCUS_01980	sequence1:125867..126436(+)	internal_stop_codon	126524..126526(+),125795..125797(+),126434..126436(+)		WP_011166426.1	extracellular solute-binding protein	92.6	14.2	34.1
MGA_199	LOCUS_01990	sequence1:126584..127261(+)	internal_stop_codon	126524..126526(+)		WP_011183407.1	ABC transporter permease subunit	94.2	20.6	29.7
MGA_204	LOCUS_02040	sequence1:130385..130768(+)	frameshift,internal_stop_codon	130141..130143(+),130225..130227(+),130240..130242(+)	130329,130173	WP_020862472.1	MBL fold metallo-hydrolase	86.6	16.9	39.3
MGA_206	LOCUS_02060	sequence1:131767..132498(+)	partial			WP_011183265.1	hypothetical protein	88.9	46.8	32.0
MGA_207	LOCUS_02070	sequence1:132622..133287(+)	partial			WP_011183265.1	hypothetical protein	33.5	15.5	40.5
MGA_210	LOCUS_02100	sequence1:134313..134681(+)	frameshift		134691,134645	WP_041272642.1	threonine ammonia-lyase	91.0	27.5	51.4
MGA_211	LOCUS_02110	sequence1:134687..135094(+)	frameshift,internal_stop_codon	135107..135109(+)	134691,135082,134651	WP_004083156.1	threonine ammonia-lyase	97.0	32.7	44.3
MGA_213	LOCUS_02130	sequence1:135877..136128(+)	frameshift,internal_stop_codon	136136..136138(+),136175..136177(+)	136119	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	95.2	9.9	58.2
MGA_214	LOCUS_02140	sequence1:136943..137164(+)	frameshift,internal_stop_codon	136762..136764(+),136900..136902(+),136696..136698(+)	137328,136869,136686	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	67.1	5.9	59.2
MGA_215	LOCUS_02150	sequence1:137167..137388(+)	frameshift,internal_stop_codon	136898..136900(+)	137328	WP_008766366.1	anaerobic ribonucleoside triphosphate reductase	72.6	6.6	52.8
MGA_216	LOCUS_02160	sequence1:137390..137776(+)	frameshift,internal_stop_codon	137774..137776(+)	137328	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	100.0	16.1	61.7
MGA_218	LOCUS_02180	sequence1:140103..140330(-)	internal_stop_codon	140382..140384(-),140334..140336(-)		WP_011166365.1	M17 family metallopeptidase	98.7	16.4	50.7
MGA_219	LOCUS_02190	sequence1:140382..141455(-)	internal_stop_codon	140382..140384(-),140334..140336(-)		WP_011166365.1	M17 family metallopeptidase	100.0	79.2	51.4
MGA_221	LOCUS_02210	sequence1:142250..142630(+)	internal_stop_codon	142727..142729(+),142628..142630(+)		WP_011166436.1	oligoendopeptidase F	99.2	20.5	47.2
MGA_222	LOCUS_02220	sequence1:142781..142999(+)	internal_stop_codon	142727..142729(+),143132..143134(+),142628..142630(+),142997..142999(+)		WP_011166436.1	oligoendopeptidase F	100.0	12.1	68.1
MGA_224	LOCUS_02240	sequence1:143404..143799(-)	internal_stop_codon	143845..143847(-)		WP_004081762.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	78.6	59.4	35.0
MGA_227	LOCUS_02270	sequence1:145555..145974(+)	internal_stop_codon	145972..145974(+)		WP_001250625.1	class II fructose-bisphosphatase	90.6	37.5	41.3
MGA_234	LOCUS_02340	sequence1:149355..149735(-)	internal_stop_codon	149841..149843(-),149754..149756(-)		WP_011166439.1	Cof-type HAD-IIB family hydrolase	100.0	44.4	48.5
MGA_235	LOCUS_02350	sequence1:149841..150152(-)	internal_stop_codon	149841..149843(-),149754..149756(-)		WP_011166439.1	Cof-type HAD-IIB family hydrolase	93.2	32.8	53.1
MGA_253	LOCUS_02530	sequence1:159543..159896(+)	partial			WP_000003765.1	S1 domain-containing post-transcriptional regulator GSP13	61.5	64.0	42.5
MGA_264	LOCUS_02640	sequence1:169430..169942(+)	internal_stop_codon	169370..169372(+)		WP_011166393.1	DUF853 family protein	100.0	20.8	33.5
MGA_266	LOCUS_02660	sequence1:170415..170699(+)	internal_stop_codon	170697..170699(+)		WP_000614886.1	site-specific DNA-methyltransferase	91.5	37.9	39.8
MGA_272	LOCUS_02720	sequence1:173588..173920(+)	internal_stop_codon	173918..173920(+)		WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	93.6	17.3	30.1
MGA_279	LOCUS_02790	sequence1:176761..177711(+)	internal_stop_codon	177949..177951(+),177709..177711(+)		WP_002288348.1	ATP-dependent chaperone ClpB	95.9	34.9	72.3
MGA_280	LOCUS_02800	sequence1:178207..178902(+)	internal_stop_codon	177949..177951(+)		WP_011183317.1	AAA family ATPase	95.7	31.4	69.5
MGA_283	LOCUS_02830	sequence1:180774..181025(+)	internal_stop_codon	181023..181025(+)		WP_000034662.1	molecular chaperone DnaK	100.0	13.7	77.1
MGA_284	LOCUS_02840	sequence1:181119..181400(+)	internal_stop_codon	181023..181025(+),181398..181400(+)		WP_011101636.1	molecular chaperone DnaK	98.9	14.8	84.8
MGA_285	LOCUS_02850	sequence1:181401..182576(+)	internal_stop_codon	181398..181400(+)		WP_011183314.1	molecular chaperone DnaK	94.4	62.3	62.9
MGA_302	LOCUS_03020	sequence1:194874..195122(+)	partial			WP_010874783.1	Cof-type HAD-IIB family hydrolase	93.9	27.6	40.0
MGA_303	LOCUS_03030	sequence1:195258..195689(+)	internal_stop_codon	195246..195248(+),195120..195122(+)		WP_011166283.1	Cof-type HAD-IIB family hydrolase	97.2	51.1	39.0
MGA_304	LOCUS_03040	sequence1:195835..196038(+)	internal_stop_codon	195817..195819(+)		WP_011166282.1	thioredoxin	98.5	64.7	48.5
MGA_305	LOCUS_03050	sequence1:196566..197159(+)	internal_stop_codon	197157..197159(+)		WP_011947930.1	arginine deiminase	98.0	48.1	50.8
MGA_306	LOCUS_03060	sequence1:197355..197579(+)	internal_stop_codon	197157..197159(+),197577..197579(+),197748..197750(+)		WP_011836692.1	arginine deiminase	100.0	18.6	44.7
MGA_307	LOCUS_03070	sequence1:197595..197750(+)	internal_stop_codon	197577..197579(+),197748..197750(+)		WP_002557431.1	arginine deiminase	100.0	12.4	60.8
MGA_308	LOCUS_03080	sequence1:197802..198182(+)	internal_stop_codon	198180..198182(+),198378..198380(+)		WP_000793596.1	ornithine carbamoyltransferase	97.6	37.0	71.5
MGA_309	LOCUS_03090	sequence1:198216..198380(+)	internal_stop_codon	198180..198182(+),198378..198380(+),198501..198503(+),198531..198533(+)		WP_002682235.1	ornithine carbamoyltransferase	100.0	15.7	63.0
MGA_310	LOCUS_03100	sequence1:198573..198803(+)	internal_stop_codon	198378..198380(+),198501..198503(+),198531..198533(+)		WP_011861433.1	ornithine carbamoyltransferase	97.4	21.8	68.0
MGA_311	LOCUS_03110	sequence1:199221..199466(+)	internal_stop_codon	199479..199481(+),199464..199466(+),198981..198983(+),199203..199205(+),199518..199520(+)		WP_001290378.1	YfcC family protein	100.0	15.1	53.1
MGA_314	LOCUS_03140	sequence1:199956..200285(+)	internal_stop_codon	199695..199697(+),199854..199856(+),200283..200285(+),199950..199952(+),199737..199739(+)		WP_011182912.1	YfcC family protein	67.0	14.0	58.9
MGA_315	LOCUS_03150	sequence1:200508..200975(+)	internal_stop_codon	200973..200975(+)		WP_011167019.1	carbamate kinase	100.0	50.0	63.9
MGA_316	LOCUS_03160	sequence1:201012..201443(+)	internal_stop_codon	200973..200975(+)		WP_011986908.1	carbamate kinase	97.9	44.6	55.7
MGA_321	LOCUS_03210	sequence1:203328..203627(+)	internal_stop_codon	203889..203891(+),203856..203858(+),203265..203267(+),203685..203687(+),203625..203627(+)		WP_003246072.1	leucine--tRNA ligase	100.0	12.3	77.8
MGA_322	LOCUS_03220	sequence1:203706..203858(+)	internal_stop_codon	203685..203687(+),203856..203858(+),203625..203627(+),203889..203891(+)		WP_015545302.1	leucine--tRNA ligase	100.0	6.2	70.0
MGA_323	LOCUS_03230	sequence1:203904..204191(+)	internal_stop_codon	203856..203858(+),203889..203891(+),204189..204191(+),203685..203687(+),203625..203627(+)		WP_003246072.1	leucine--tRNA ligase	98.9	11.7	54.3
MGA_324	LOCUS_03240	sequence1:204204..204638(+)	internal_stop_codon	204699..204701(+),204636..204638(+),204189..204191(+),204870..204872(+),204714..204716(+),204801..204803(+)		WP_001830785.1	leucine--tRNA ligase	98.6	17.8	62.9
MGA_325	LOCUS_03250	sequence1:204942..205085(+)	internal_stop_codon	204699..204701(+),205083..205085(+),205116..205118(+),204870..204872(+),204714..204716(+),205317..205319(+),204801..204803(+)		WP_011183388.1	leucine--tRNA ligase	100.0	5.9	78.7
MGA_326	LOCUS_03260	sequence1:205128..205319(+)	internal_stop_codon	205116..205118(+),205083..205085(+),205416..205418(+),205317..205319(+),204870..204872(+)		WP_011183388.1	leucine--tRNA ligase	98.4	7.7	56.5
MGA_337	LOCUS_03370	sequence1:212869..213564(+)	internal_stop_codon	213562..213564(+)		WP_020862624.1	ABC transporter permease	87.4	10.9	24.3
MGA_343	LOCUS_03430	sequence1:217689..217946(+)	internal_stop_codon	217944..217946(+)		WP_011166223.1	methionine--tRNA ligase	91.8	15.3	67.9
MGA_344	LOCUS_03440	sequence1:218010..218384(+)	internal_stop_codon	218457..218459(+),218382..218384(+),217944..217946(+),218526..218528(+)		WP_003733137.1	methionine--tRNA ligase	100.0	19.9	51.5
MGA_345	LOCUS_03450	sequence1:218535..218996(+)	internal_stop_codon	218382..218384(+),218457..218459(+),218994..218996(+),218526..218528(+)		WP_011182933.1	methionine--tRNA ligase	100.0	30.3	53.2
MGA_347	LOCUS_03470	sequence1:219289..219558(+)	internal_stop_codon	219556..219558(+)		WP_011183567.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.9	14.1	72.7
MGA_348	LOCUS_03480	sequence1:219601..220671(+)	internal_stop_codon	219556..219558(+),220669..220671(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	100.0	56.8	60.5
MGA_349	LOCUS_03490	sequence1:220690..221172(+)	internal_stop_codon	220669..220671(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	87.5	22.4	48.2
MGA_350	LOCUS_03500	sequence1:221172..221714(+)	internal_stop_codon	221772..221774(+),221712..221714(+),221751..221753(+)		WP_011182984.1	cysteine--tRNA ligase	99.4	40.6	50.3
MGA_351	LOCUS_03510	sequence1:221961..222416(+)	internal_stop_codon	222414..222416(+),221772..221774(+),221712..221714(+),221751..221753(+)		WP_011167108.1	cysteine--tRNA ligase	91.4	29.5	32.9
MGA_352	LOCUS_03520	sequence1:222442..223035(+)	frameshift,internal_stop_codon	223033..223035(+)	223065	WP_011183430.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	77.7	32.7	41.7
MGA_353	LOCUS_03530	sequence1:223124..223465(+)	frameshift,internal_stop_codon	223033..223035(+)	223065	WP_011922419.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	87.6	22.3	44.4
MGA_354	LOCUS_03540	sequence1:223582..224091(+)	internal_stop_codon	224089..224091(+)		WP_002287441.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	97.0	57.7	40.0
MGA_359	LOCUS_03590	sequence1:226006..226245(+)	internal_stop_codon	225907..225909(+)		WP_005904074.1	transcription termination/antitermination protein NusG	74.7	30.6	44.1
MGA_360	LOCUS_03600	sequence1:226259..226477(+)	internal_stop_codon	226475..226477(+)		WP_001148797.1	DNA-3-methyladenine glycosylase	86.1	30.2	45.2
MGA_361	LOCUS_03610	sequence1:226514..226855(+)	internal_stop_codon	226475..226477(+)		WP_172636477.1	DNA-3-methyladenine glycosylase	100.0	60.6	38.6
MGA_363	LOCUS_03630	sequence1:227895..228053(-)	internal_stop_codon	227895..227897(-),227862..227864(-)		WP_011183237.1	isochorismatase family protein	100.0	31.9	59.6
MGA_368	LOCUS_03680	sequence1:230577..231464(+)	internal_stop_codon	231462..231464(+)		WP_011183556.1	redox-regulated ATPase YchF	100.0	80.5	60.3
MGA_369	LOCUS_03690	sequence1:231689..231868(+)	internal_stop_codon	231866..231868(+)		WP_011015827.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	98.3	36.2	55.2
MGA_370	LOCUS_03700	sequence1:231890..232141(+)	internal_stop_codon	231866..231868(+)		WP_010963756.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	78.3	41.9	44.6
MGA_381	LOCUS_03810	sequence1:238787..238981(+)	internal_stop_codon	238979..238981(+)		WP_011183547.1	glutamate--tRNA ligase	93.8	12.4	83.3
MGA_382	LOCUS_03820	sequence1:238982..239344(+)	internal_stop_codon	238979..238981(+),239342..239344(+)		WP_002287447.1	glutamate--tRNA ligase	99.2	24.3	42.0
MGA_383	LOCUS_03830	sequence1:239387..239647(+)	internal_stop_codon	239645..239647(+),239756..239758(+),239861..239863(+),239342..239344(+)		WP_003732826.1	glutamate--tRNA ligase	100.0	17.5	69.8
MGA_385	LOCUS_03850	sequence1:240083..240250(+)	internal_stop_codon	239861..239863(+),240050..240052(+)		WP_011166335.1	glutamate--tRNA ligase	78.2	8.9	74.4
MGA_386	LOCUS_03860	sequence1:240345..240833(+)	internal_stop_codon	240831..240833(+),240297..240299(+)		WP_011183546.1	HD domain-containing protein	100.0	38.1	54.3
MGA_387	LOCUS_03870	sequence1:240927..241472(+)	internal_stop_codon	240831..240833(+)		WP_011183546.1	HD domain-containing protein	91.2	41.8	31.6
MGA_389	LOCUS_03890	sequence1:242100..242930(+)	internal_stop_codon	243081..243083(+),242928..242930(+)		WP_011183544.1	CTP synthase	99.3	51.5	68.2
MGA_390	LOCUS_03900	sequence1:242940..243083(+)	internal_stop_codon	243081..243083(+),242928..242930(+)		WP_011027968.1	CTP synthase	97.9	8.4	54.3
MGA_391	LOCUS_03910	sequence1:243135..243464(+)	internal_stop_codon	243462..243464(+),243081..243083(+),242928..242930(+)		WP_209320045.1	CTP synthase (glutamine hydrolyzing)	100.0	20.4	60.9
MGA_392	LOCUS_03920	sequence1:243513..243701(+)	internal_stop_codon	243462..243464(+)		WP_011183544.1	CTP synthase	100.0	11.3	69.4
MGA_393	LOCUS_03930	sequence1:243806..244183(-)	partial			WP_003416869.1	thioredoxin-disulfide reductase	45.6	18.1	61.4
MGA_394	LOCUS_03940	sequence1:244524..244868(-)	frameshift,internal_stop_codon	244340..244342(-),244518..244520(-),244524..244526(-)	244397	WP_008763049.1	sugar kinase	99.1	32.6	36.3
MGA_398	LOCUS_03980	sequence1:245766..246098(-)	internal_stop_codon	245631..245633(-),245766..245768(-)		WP_011728678.1	GntR family transcriptional regulator	86.4	40.4	41.1
MGA_400	LOCUS_04000	sequence1:247576..248007(+)	frameshift,internal_stop_codon	248178..248180(+),248217..248219(+)	248017,248086,248105,248234,247995	WP_010963683.1	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	97.9	53.5	47.9
MGA_402	LOCUS_04020	sequence1:249727..250458(+)	internal_stop_codon	249565..249567(+),250660..250662(+),249631..249633(+),250456..250458(+)		WP_004254838.1	adenylosuccinate synthase	100.0	56.5	57.2
MGA_403	LOCUS_04030	sequence1:250468..250662(+)	internal_stop_codon	250660..250662(+),250456..250458(+)		WP_010966856.1	adenylosuccinate synthase	100.0	15.0	42.2
MGA_404	LOCUS_04040	sequence1:251001..251720(+)	internal_stop_codon	250893..250895(+),251718..251720(+),250866..250868(+),250926..250928(+)		WP_020862972.1	adenylosuccinate lyase	100.0	55.3	64.4
MGA_405	LOCUS_04050	sequence1:251784..252128(+)	internal_stop_codon	251718..251720(+)		WP_011182972.1	adenylosuccinate lyase	98.2	26.2	46.9
MGA_406	LOCUS_04060	sequence1:252130..252270(+)	internal_stop_codon	252268..252270(+)		WP_004597952.1	aminoacyl-tRNA hydrolase	93.5	23.8	56.8
MGA_407	LOCUS_04070	sequence1:252322..252699(+)	internal_stop_codon	252268..252270(+)		WP_011167103.1	aminoacyl-tRNA hydrolase	98.4	65.6	42.7
MGA_424	LOCUS_04240	sequence1:263285..263857(+)	internal_stop_codon	263855..263857(+)		WP_001557331.1	type I DNA topoisomerase	100.0	27.5	54.4
MGA_425	LOCUS_04250	sequence1:263984..264370(+)	internal_stop_codon	264368..264370(+),263855..263857(+)		WP_005902939.1	type I DNA topoisomerase	96.1	16.4	53.2
MGA_426	LOCUS_04260	sequence1:264413..264907(+)	internal_stop_codon	264368..264370(+),264905..264907(+)		WP_012047858.1	type I DNA topoisomerase	100.0	23.9	40.4
MGA_427	LOCUS_04270	sequence1:264938..265285(+)	internal_stop_codon	264905..264907(+)		WP_009892959.1	type I DNA topoisomerase	65.2	10.9	46.1
MGA_430	LOCUS_04300	sequence1:265988..266635(+)	internal_stop_codon	265943..265945(+),265952..265954(+),266633..266635(+)		WP_011166689.1	glucose-6-phosphate isomerase	100.0	50.1	63.4
MGA_431	LOCUS_04310	sequence1:266768..266986(+)	internal_stop_codon	266984..266986(+),266633..266635(+)		WP_011166689.1	glucose-6-phosphate isomerase	100.0	16.9	51.4
MGA_433	LOCUS_04330	sequence1:267749..268828(+)	internal_stop_codon	268826..268828(+)		WP_011166497.1	ribonuclease J	100.0	61.4	44.6
MGA_434	LOCUS_04340	sequence1:268832..269416(+)	internal_stop_codon	268826..268828(+)		WP_011166497.1	ribonuclease J	99.5	33.3	52.0
MGA_442	LOCUS_04420	sequence1:274807..275673(+)	partial			WP_011166888.1	energy-coupling factor transporter ATPase	96.9	68.4	61.6
MGA_444	LOCUS_04440	sequence1:276590..276868(+)	partial			WP_011183051.1	energy-coupling factor transporter transmembrane component T	92.4	25.6	54.1
MGA_445	LOCUS_04450	sequence1:276986..277420(+)	partial			WP_011166886.1	energy-coupling factor transporter transmembrane component T	88.9	38.1	73.4
MGA_446	LOCUS_04460	sequence1:277858..278295(+)	internal_stop_codon	277726..277728(+),277606..277608(+)		WP_011183052.1	tRNA pseudouridine(38-40) synthase TruA	100.0	59.0	43.7
MGA_450	LOCUS_04500	sequence1:280248..281756(+)	internal_stop_codon	281754..281756(+),281979..281981(+),281859..281861(+)		WP_166508209.1	ferrous iron transport protein B	97.8	74.0	55.6
MGA_451	LOCUS_04510	sequence1:281985..282176(+)	internal_stop_codon	281754..281756(+),281979..281981(+),282174..282176(+),281859..281861(+)		WP_166508209.1	ferrous iron transport protein B	100.0	9.6	63.5
MGA_454	LOCUS_04540	sequence1:283835..284659(+)	internal_stop_codon	284657..284659(+)		WP_011182981.1	replicative DNA helicase	95.6	58.5	35.7
MGA_455	LOCUS_04550	sequence1:284753..285064(+)	internal_stop_codon	285062..285064(+),284657..284659(+)		WP_011182981.1	replicative DNA helicase	93.2	21.2	74.0
MGA_464	LOCUS_04640	sequence1:289170..289535(+)	internal_stop_codon	289098..289100(+),289152..289154(+),288975..288977(+)		WP_011166912.1	50S ribosomal protein L4	99.2	57.7	57.5
MGA_466	LOCUS_04660	sequence1:289872..290492(+)	internal_stop_codon	290490..290492(+),290625..290627(+),290514..290516(+)		WP_011183023.1	50S ribosomal protein L2	100.0	73.7	72.5
MGA_468	LOCUS_04680	sequence1:291602..292084(+)	internal_stop_codon	291536..291538(+),291566..291568(+),292082..292084(+),291524..291526(+)		WP_011166907.1	30S ribosomal protein S3	98.1	67.4	69.4
MGA_469	LOCUS_04690	sequence1:292205..292327(+)	internal_stop_codon	292397..292399(+),292385..292387(+),292481..292483(+),292325..292327(+)		WP_011183027.1	50S ribosomal protein L16	100.0	29.2	70.0
MGA_470	LOCUS_04700	sequence1:292618..293415(+)	partial			WP_011166905.1	50S ribosomal protein L29	40.8	74.6	40.7
MGA_481	LOCUS_04810	sequence1:297687..298037(+)	internal_stop_codon	298257..298259(+),298035..298037(+),298086..298088(+),298167..298169(+)		WP_011183039.1	preprotein translocase subunit SecY	94.8	24.5	58.8
MGA_482	LOCUS_04820	sequence1:298437..298706(+)	internal_stop_codon	298368..298370(+),298257..298259(+),298704..298706(+)		WP_011166894.1	preprotein translocase subunit SecY	97.8	17.8	69.0
MGA_483	LOCUS_04830	sequence1:298752..299111(+)	internal_stop_codon	298704..298706(+)		WP_011166894.1	preprotein translocase subunit SecY	88.2	21.8	72.4
MGA_484	LOCUS_04840	sequence1:299136..299381(+)	internal_stop_codon	299379..299381(+)		WP_008760056.1	adenylate kinase	85.2	36.5	58.0
MGA_485	LOCUS_04850	sequence1:299505..299747(+)	internal_stop_codon	299379..299381(+)		WP_011183041.1	nucleoside monophosphate kinase	80.0	30.2	62.5
MGA_488	LOCUS_04880	sequence1:300554..300685(+)	internal_stop_codon	300683..300685(+)		WP_008362476.1	30S ribosomal protein S11	76.7	25.6	78.8
MGA_489	LOCUS_04890	sequence1:300701..300943(+)	internal_stop_codon	300683..300685(+)		WP_008362476.1	30S ribosomal protein S11	100.0	62.0	72.5
MGA_495	LOCUS_04950	sequence1:304011..305876(+)	partial			WP_020862895.1	ABC transporter permease	99.0	42.3	27.7
MGA_498	LOCUS_04980	sequence1:306597..307229(+)	internal_stop_codon	307227..307229(+)		WP_011183053.1	ABC transporter permease	98.6	14.0	31.7
MGA_499	LOCUS_04990	sequence1:307554..307925(+)	internal_stop_codon	307923..307925(+),307470..307472(+)		WP_020862895.1	ABC transporter permease	100.0	9.0	34.7
MGA_507	LOCUS_05070	sequence1:312218..312751(+)	internal_stop_codon	312206..312208(+)		WP_011166938.1	RDD family protein	93.2	64.5	31.3
MGA_508	LOCUS_05080	sequence1:312792..312953(+)	internal_stop_codon	313233..313235(+),313044..313046(+),312951..312953(+)		WP_011707891.1	DNA helicase Rep	73.6	5.8	74.4
MGA_509	LOCUS_05090	sequence1:313527..314777(+)	internal_stop_codon	314775..314777(+),313497..313499(+),313422..313424(+),314844..314846(+),313302..313304(+)		WP_011166937.1	UvrD-helicase domain-containing protein	99.5	57.2	40.8
MGA_513	LOCUS_05130	sequence1:316449..317096(+)	internal_stop_codon	317094..317096(+)		WP_011166293.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	100.0	67.4	56.7
MGA_514	LOCUS_05140	sequence1:317199..317399(+)	internal_stop_codon	317094..317096(+)		WP_011166293.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	92.4	19.7	50.8
MGA_515	LOCUS_05150	sequence1:317429..318073(+)	internal_stop_codon	318071..318073(+),318143..318145(+)		WP_011183381.1	MurR/RpiR family transcriptional regulator	98.6	82.3	35.5
MGA_517	LOCUS_05170	sequence1:319171..319671(+)	internal_stop_codon	319669..319671(+)		WP_011183561.1	purine-nucleoside phosphorylase	99.4	69.8	64.8
MGA_518	LOCUS_05180	sequence1:319711..319881(+)	internal_stop_codon	319669..319671(+)		WP_011183561.1	purine-nucleoside phosphorylase	98.2	23.4	65.5
MGA_519	LOCUS_05190	sequence1:319903..320601(+)	internal_stop_codon	320599..320601(+),320866..320868(+)		WP_011166290.1	asparagine--tRNA ligase	93.1	47.1	65.3
MGA_520	LOCUS_05200	sequence1:320602..320868(+)	internal_stop_codon	321124..321126(+),320599..320601(+),320866..320868(+)		WP_011166290.1	asparagine--tRNA ligase	98.9	19.2	50.6
MGA_521	LOCUS_05210	sequence1:320872..321126(+)	internal_stop_codon	321124..321126(+),320599..320601(+),320866..320868(+)		WP_011166290.1	asparagine--tRNA ligase	100.0	18.6	70.2
MGA_527	LOCUS_05270	sequence1:325210..325350(+)	internal_stop_codon	325606..325608(+),325348..325350(+),325549..325551(+)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	10.1	80.4
MGA_528	LOCUS_05280	sequence1:325432..325551(+)	internal_stop_codon	325606..325608(+),325348..325350(+),325549..325551(+)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	8.6	59.0
MGA_529	LOCUS_05290	sequence1:325762..325932(+)	internal_stop_codon	325606..325608(+),325549..325551(+),325930..325932(+)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	12.3	57.1
MGA_530	LOCUS_05300	sequence1:325960..326217(+)	internal_stop_codon	326350..326352(+),325930..325932(+),326215..326217(+)		WP_011166460.1	FAD-dependent oxidoreductase	98.8	18.5	56.0
MGA_531	LOCUS_05310	sequence1:326995..327279(+)	internal_stop_codon	327277..327279(+)		WP_011986275.1	lipoate--protein ligase	97.9	28.4	42.6
MGA_532	LOCUS_05320	sequence1:327349..327561(+)	internal_stop_codon	327277..327279(+)		WP_011166461.1	lipoate--protein ligase	97.1	20.4	55.9
MGA_533	LOCUS_05330	sequence1:327594..327860(+)	internal_stop_codon	327891..327893(+),327858..327860(+)		WP_011166462.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	98.9	23.5	65.5
MGA_534	LOCUS_05340	sequence1:327912..328493(+)	internal_stop_codon	328557..328559(+),328491..328493(+),327891..327893(+),327858..327860(+)		WP_011166462.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	100.0	52.2	62.2
MGA_535	LOCUS_05350	sequence1:328697..329428(+)	internal_stop_codon	329426..329428(+)		WP_011182937.1	alpha-ketoacid dehydrogenase subunit beta	100.0	73.9	70.4
MGA_536	LOCUS_05360	sequence1:329438..329686(+)	internal_stop_codon	329426..329428(+)		WP_011166463.1	alpha-ketoacid dehydrogenase subunit beta	98.8	24.6	64.2
MGA_538	LOCUS_05380	sequence1:331007..331255(+)	internal_stop_codon	331253..331255(+)		WP_011182939.1	dihydrolipoyl dehydrogenase	100.0	13.8	62.7
MGA_539	LOCUS_05390	sequence1:331262..332392(+)	internal_stop_codon	331253..331255(+)		WP_011182939.1	dihydrolipoyl dehydrogenase	97.9	62.3	58.2
MGA_542	LOCUS_05420	sequence1:334340..334828(+)	frameshift,internal_stop_codon	334827..334829(+)	334334	WP_010990051.1	fructose-specific PTS transporter subunit EIIC	79.6	19.8	39.5
MGA_543	LOCUS_05430	sequence1:334910..335278(+)	internal_stop_codon	334826..334828(+),334701..334703(+),335276..335278(+)		WP_003245781.1	PTS mannose transporter subunit IIABC	70.5	12.5	36.0
MGA_544	LOCUS_05440	sequence1:335260..335472(-)	frameshift,internal_stop_codon	335485..335487(-),335678..335680(-),335584..335586(-),335454..335456(-),335560..335562(-)	335602	WP_011861812.1	PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC	61.4	6.7	55.8
MGA_547	LOCUS_05470	sequence1:336401..336640(+)	internal_stop_codon	336638..336640(+),336257..336259(+)		WP_012027496.1	pyridoxal phosphate-dependent aminotransferase	94.9	19.4	42.7
MGA_568	LOCUS_05680	sequence1:347869..348204(+)	internal_stop_codon	348202..348204(+),348493..348495(+)		WP_005051985.1	ATPase RavA	98.2	22.1	61.8
MGA_569	LOCUS_05690	sequence1:348292..348495(+)	internal_stop_codon	348202..348204(+),348682..348684(+),348610..348612(+),348493..348495(+)		WP_011202758.1	AAA family ATPase	97.0	12.4	50.8
MGA_573	LOCUS_05730	sequence1:350158..350769(+)	internal_stop_codon	350092..350094(+)		WP_005817735.1	VWA domain-containing protein	92.6	41.0	35.1
MGA_595	LOCUS_05950	sequence1:363255..363710(+)	internal_stop_codon	363708..363710(+)		WP_011166595.1	(d)CMP kinase	99.3	67.6	46.7
MGA_597	LOCUS_05970	sequence1:363928..364074(+)	internal_stop_codon	364072..364074(+)		WP_003640588.1	ribosome biogenesis GTPase Der	93.8	10.3	82.2
MGA_598	LOCUS_05980	sequence1:364153..364818(+)	internal_stop_codon	364072..364074(+),364816..364818(+)		WP_011166596.1	ribosome biogenesis GTPase Der	100.0	50.8	57.0
MGA_599	LOCUS_05990	sequence1:364849..365244(+)	internal_stop_codon	364816..364818(+)		WP_011183096.1	ribosome biogenesis GTPase Der	96.9	29.2	62.2
MGA_603	LOCUS_06030	sequence1:368007..368150(-)	partial			WP_011166447.1	PTS transporter subunit EIIB	80.9	10.1	65.8
MGA_605	LOCUS_06050	sequence1:368463..368747(-)	frameshift,internal_stop_codon	368462..368464(-)	368741,368885	WP_020862581.1	MurR/RpiR family transcriptional regulator	98.9	33.6	53.8
MGA_606	LOCUS_06060	sequence1:368829..369047(-)	frameshift		368744,368885	WP_020862581.1	MurR/RpiR family transcriptional regulator	86.1	22.0	53.2
MGA_607	LOCUS_06070	sequence1:369769..370179(+)	internal_stop_codon	370177..370179(+),370405..370407(+),370240..370242(+)		WP_011166447.1	PTS transporter subunit EIIB	98.5	33.7	54.5
MGA_608	LOCUS_06080	sequence1:370864..371040(+)	frameshift,internal_stop_codon	371039..371041(+),370835..370837(+),370859..370861(+)	370720	WP_011817229.1	PTS N-acetylmuramic acid transporter subunit IIBC	87.9	10.6	52.9
MGA_610	LOCUS_06100	sequence1:371474..371674(+)	frameshift,internal_stop_codon	371753..371755(+)	371785,371665,371716	WP_011166445.1	N-acetylmuramic acid 6-phosphate etherase	92.4	20.2	47.5
MGA_611	LOCUS_06110	sequence1:371782..372381(+)	frameshift,internal_stop_codon	371753..371755(+)	371785,371665,371716	WP_011166445.1	N-acetylmuramic acid 6-phosphate etherase	98.5	64.6	57.1
MGA_615	LOCUS_06150	sequence1:374140..374388(+)	internal_stop_codon	374386..374388(+),373981..373983(+)		WP_012545097.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	90.2	12.7	41.9
MGA_616	LOCUS_06160	sequence1:374938..375600(+)	internal_stop_codon	374866..374868(+),375709..375711(+),375598..375600(+)		WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	98.6	29.1	37.1
MGA_627	LOCUS_06270	sequence1:379310..379609(+)	partial			WP_010974920.1	type IV secretion system ATPase VirD4	69.7	9.6	46.4
MGA_628	LOCUS_06280	sequence1:379829..380347(+)	internal_stop_codon	380345..380347(+)		WP_011244838.1	type IV secretory system conjugative DNA transfer family protein	45.3	9.0	38.0
MGA_632	LOCUS_06320	sequence1:382339..382923(+)	internal_stop_codon	382921..382923(+)		WP_044682503.1	ATPase AAA	92.3	22.9	26.7
MGA_642	LOCUS_06420	sequence1:387527..388021(+)	partial			WP_011107551.1	magnesium-translocating P-type ATPase	92.7	17.2	54.6
MGA_651	LOCUS_06510	sequence1:393835..394542(+)	partial			WP_003548928.1	ABC transporter ATP-binding protein	90.2	73.9	35.8
MGA_659	LOCUS_06590	sequence1:398694..399401(+)	internal_stop_codon	399399..399401(+),399471..399473(+)		WP_011183211.1	DEAD/DEAH box helicase family protein	55.3	14.4	54.6
MGA_660	LOCUS_06600	sequence1:399483..400793(+)	internal_stop_codon	399399..399401(+),399471..399473(+),400791..400793(+)		WP_011183211.1	DEAD/DEAH box helicase family protein	99.5	47.8	58.5
MGA_661	LOCUS_06610	sequence1:400887..401321(+)	internal_stop_codon	401319..401321(+),400791..400793(+),401514..401516(+)		WP_011183211.1	DEAD/DEAH box helicase family protein	94.4	15.0	47.1
MGA_679	LOCUS_06790	sequence1:410158..410493(+)	internal_stop_codon	410506..410508(+),410569..410571(+),410533..410535(+),410491..410493(+)		WP_011183406.1	Pr6Pr family membrane protein	77.5	27.9	36.4
MGA_681	LOCUS_06810	sequence1:412140..413339(+)	partial			WP_011183423.1	DEAD/DEAH box helicase	93.0	55.7	45.6
MGA_683	LOCUS_06830	sequence1:415489..415869(+)	frameshift,internal_stop_codon	415409..415411(+)	415495	WP_002289801.1	AEC family transporter	79.4	28.1	39.0
MGA_686	LOCUS_06860	sequence1:417821..417946(+)	internal_stop_codon	417944..417946(+),417950..417952(+),418124..418126(+),417653..417655(+)		WP_001830862.1	valine--tRNA ligase	97.6	4.5	70.0
MGA_687	LOCUS_06870	sequence1:418190..418324(+)	internal_stop_codon	417944..417946(+),417950..417952(+),418124..418126(+),418322..418324(+)		WP_011166500.1	valine--tRNA ligase	100.0	4.9	77.3
MGA_688	LOCUS_06880	sequence1:418337..418678(+)	internal_stop_codon	418826..418828(+),418322..418324(+),418913..418915(+),418823..418825(+),418676..418678(+),418124..418126(+),418781..418783(+)		WP_011183252.1	valine--tRNA ligase	100.0	13.1	62.3
MGA_689	LOCUS_06890	sequence1:419072..419326(+)	internal_stop_codon	418826..418828(+),418982..418984(+),419060..419062(+),419540..419542(+),418913..418915(+),419324..419326(+),419441..419443(+),418823..418825(+)		WP_000072238.1	valine--tRNA ligase	100.0	9.5	75.0
MGA_690	LOCUS_06900	sequence1:419621..420232(+)	internal_stop_codon	419540..419542(+),419441..419443(+)		WP_011166500.1	valine--tRNA ligase	99.5	22.8	40.4
MGA_691	LOCUS_06910	sequence1:420207..420386(+)	frameshift,internal_stop_codon	420639..420641(+),420555..420557(+)	420377	WP_011183430.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	78.0	10.3	80.4
MGA_692	LOCUS_06920	sequence1:420431..420556(+)	frameshift,internal_stop_codon	420639..420641(+),420555..420557(+)	420665,420380	WP_011836971.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	95.1	8.8	66.7
MGA_693	LOCUS_06930	sequence1:420784..421038(+)	frameshift,internal_stop_codon	420638..420640(+),420554..420556(+)	420664,421009,421109	WP_002262867.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	77.4	14.6	55.4
MGA_696	LOCUS_06960	sequence1:422065..422784(+)	internal_stop_codon	421876..421878(+),422047..422049(+),422782..422784(+)		WP_011166693.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	100.0	50.7	58.6
MGA_697	LOCUS_06970	sequence1:422803..423084(+)	internal_stop_codon	422782..422784(+)		WP_011166693.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	98.9	19.5	64.1
MGA_698	LOCUS_06980	sequence1:423136..423315(+)	internal_stop_codon	423313..423315(+)		WP_003416451.1	RidA family protein	100.0	46.8	57.6
MGA_700	LOCUS_07000	sequence1:424140..424529(+)	internal_stop_codon	424527..424529(+)		WP_011166264.1	peroxiredoxin	93.8	83.2	37.9
MGA_701	LOCUS_07010	sequence1:424680..425390(+)	internal_stop_codon	425388..425390(+)		WP_011948764.1	MATE family efflux transporter	89.4	40.9	23.2
MGA_706	LOCUS_07060	sequence1:428546..428785(+)	internal_stop_codon	428783..428785(+),429014..429016(+),428792..428794(+),428924..428926(+)		WP_011203420.1	thymidylate synthase	100.0	29.9	68.4
MGA_707	LOCUS_07070	sequence1:429038..429415(+)	internal_stop_codon	428783..428785(+),429014..429016(+),428792..428794(+),428924..428926(+)		WP_003598632.1	thymidylate synthase	100.0	39.2	70.4
MGA_709	LOCUS_07090	sequence1:430116..430694(+)	internal_stop_codon	430053..430055(+),430095..430097(+)		WP_020862806.1	lysophospholipid acyltransferase family protein	99.0	61.9	49.7
MGA_714	LOCUS_07140	sequence1:434289..434759(+)	internal_stop_codon	434787..434789(+),434757..434759(+)		WP_011166577.1	deoxynucleoside kinase	100.0	76.6	50.3
MGA_715	LOCUS_07150	sequence1:435086..435283(-)	internal_stop_codon	435086..435088(-),434978..434980(-),435350..435352(-)		WP_011183442.1	inorganic diphosphatase	100.0	34.8	76.9
MGA_716	LOCUS_07160	sequence1:435350..435514(-)	internal_stop_codon	435086..435088(-),435350..435352(-)		WP_011183442.1	inorganic diphosphatase	100.0	28.9	87.0
MGA_722	LOCUS_07220	sequence1:440194..440463(+)	internal_stop_codon	440461..440463(+)		WP_020862721.1	endopeptidase La	82.0	9.3	41.1
MGA_723	LOCUS_07230	sequence1:440512..441096(+)	internal_stop_codon	441115..441117(+),441094..441096(+),440461..440463(+)		WP_001047611.1	endopeptidase La	97.4	24.3	30.2
MGA_724	LOCUS_07240	sequence1:441160..442533(+)	internal_stop_codon	441094..441096(+),441115..441117(+)		WP_011183303.1	endopeptidase La	99.1	57.6	74.4
MGA_736	LOCUS_07360	sequence1:451386..451757(+)	internal_stop_codon	451755..451757(+)		WP_011166632.1	hypothetical protein	82.1	49.3	50.5
MGA_739	LOCUS_07390	sequence1:453168..453731(+)	internal_stop_codon	453729..453731(+)		WP_011183309.1	DUF2779 domain-containing protein	96.3	23.3	40.3
MGA_740	LOCUS_07400	sequence1:453825..454118(+)	internal_stop_codon	453729..453731(+)		WP_011183309.1	DUF2779 domain-containing protein	97.9	14.7	50.0
MGA_741	LOCUS_07410	sequence1:454135..454833(+)	internal_stop_codon	454831..454833(+)		WP_011183308.1	methionyl-tRNA formyltransferase	99.1	73.2	53.0
MGA_744	LOCUS_07440	sequence1:456653..457084(+)	frameshift,internal_stop_codon	457082..457084(+),457122..457124(+)	457093	WP_003709193.1	DeoR/GlpR family DNA-binding transcription regulator	93.0	52.2	36.8
MGA_745	LOCUS_07450	sequence1:457140..457355(+)	frameshift,internal_stop_codon	457082..457084(+),457122..457124(+)	457090	WP_011183076.1	DeoR/GlpR family DNA-binding transcription regulator	95.8	30.0	44.9
MGA_746	LOCUS_07460	sequence1:457418..457615(+)	frameshift,internal_stop_codon	457613..457615(+)	457813,457687	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	92.3	8.8	40.0
MGA_747	LOCUS_07470	sequence1:457784..458230(+)	frameshift,internal_stop_codon	457613..457615(+),458193..458195(+),458238..458240(+),458205..458207(+),458235..458237(+)	458183,457813,457687	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	81.1	18.4	53.6
MGA_749	LOCUS_07490	sequence1:458341..458688(+)	frameshift,internal_stop_codon	458726..458728(+),458192..458194(+),458234..458236(+),458204..458206(+),458237..458239(+),458760..458762(+)	458825,458683,458749,458182	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	96.5	16.1	46.8
MGA_750	LOCUS_07500	sequence1:458841..459044(+)	frameshift,internal_stop_codon	458725..458727(+),459044..459046(+),458759..458761(+)	458682,458748,458830	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	97.0	9.6	49.2
MGA_751	LOCUS_07510	sequence1:459095..459334(+)	frameshift,internal_stop_codon	459332..459334(+)	459412	WP_011183077.1	1-phosphofructokinase	62.0	15.8	63.3
MGA_753	LOCUS_07530	sequence1:459585..459815(+)	frameshift,internal_stop_codon	459862..459864(+),459799..459801(+)	459788	WP_011986316.1	1-phosphofructokinase	93.4	22.9	46.5
MGA_754	LOCUS_07540	sequence1:459898..460080(+)	frameshift,internal_stop_codon	459862..459864(+),459799..459801(+)	459788	WP_003549796.1	1-phosphofructokinase	98.3	19.4	45.8
MGA_760	LOCUS_07600	sequence1:464209..465225(+)	frameshift,internal_stop_codon	465329..465331(+),465223..465225(+)	465265,465228	WP_011166623.1	GTPase ObgE	98.8	77.6	58.0
MGA_761	LOCUS_07610	sequence1:465683..465928(+)	internal_stop_codon	465554..465556(+),465926..465928(+),466073..466075(+)		WP_011183419.1	NAD(+) synthase	100.0	34.0	43.4
MGA_763	LOCUS_07630	sequence1:466422..466796(+)	partial			WP_011254221.1	ribosome-associated translation inhibitor RaiA	83.9	56.7	33.7
MGA_779	LOCUS_07790	sequence1:479368..479580(+)	frameshift,internal_stop_codon	479704..479706(+),479752..479754(+),479578..479580(+),479254..479256(+)	479219	WP_011166496.1	APC family permease	71.4	9.3	50.0
MGA_780	LOCUS_07800	sequence1:480289..480753(+)	internal_stop_codon	480751..480753(+)		WP_004398802.1	YebC/PmpR family DNA-binding transcriptional regulator	99.4	64.6	57.4
MGA_781	LOCUS_07810	sequence1:480784..481023(+)	internal_stop_codon	480751..480753(+)		WP_010965592.1	YebC/PmpR family DNA-binding transcriptional regulator	98.7	30.1	39.7
MGA_784	LOCUS_07840	sequence1:482242..482556(+)	frameshift,internal_stop_codon	482206..482208(+),482489..482491(+),482038..482040(+)	482752,482433,482828	WP_011166725.1	Holliday junction branch migration DNA helicase RuvB	58.7	19.9	62.3
MGA_788	LOCUS_07880	sequence1:484026..484937(+)	internal_stop_codon	484935..484937(+)		WP_003021278.1	protein translocase subunit SecD	45.2	21.2	25.4
MGA_795	LOCUS_07950	sequence1:487291..488130(+)	internal_stop_codon	488128..488130(+),487261..487263(+),487285..487287(+)		WP_011183175.1	RelA/SpoT family protein	100.0	36.6	63.6
MGA_796	LOCUS_07960	sequence1:488284..488694(+)	internal_stop_codon	488128..488130(+),488692..488694(+)		WP_011166659.1	RelA/SpoT family protein	100.0	18.1	59.6
MGA_797	LOCUS_07970	sequence1:488764..489081(+)	internal_stop_codon	488692..488694(+),489079..489081(+)		WP_011183175.1	RelA/SpoT family protein	99.0	13.7	43.8
MGA_803	LOCUS_08030	sequence1:492427..492777(+)	internal_stop_codon	492775..492777(+)		WP_012544951.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	99.1	46.7	58.3
MGA_804	LOCUS_08040	sequence1:492808..493215(+)	internal_stop_codon	492775..492777(+)		WP_011183226.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	97.8	49.1	47.0
MGA_805	LOCUS_08050	sequence1:493308..493808(+)	partial			WP_011073211.1	thiol peroxidase	78.3	66.0	42.3
MGA_811	LOCUS_08110	sequence1:500350..500709(+)	partial			WP_020862581.1	MurR/RpiR family transcriptional regulator	77.3	32.1	33.7
MGA_813	LOCUS_08130	sequence1:501279..501674(+)	frameshift		501671	WP_003017863.1	type I DNA topoisomerase	85.5	14.3	39.3
MGA_816	LOCUS_08160	sequence1:503871..503999(+)	internal_stop_codon	504036..504038(+),503691..503693(+),504147..504149(+),503631..503633(+),503997..503999(+)		WP_011166626.1	nicotinate-nucleotide adenylyltransferase	100.0	11.4	69.0
MGA_817	LOCUS_08170	sequence1:504171..504377(+)	internal_stop_codon	503997..503999(+),504036..504038(+),504147..504149(+)		WP_011183272.1	nicotinate-nucleotide adenylyltransferase	97.1	17.9	42.4
MGA_818	LOCUS_08180	sequence1:504620..505075(+)	internal_stop_codon	504518..504520(+)		WP_011166627.1	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	97.4	64.7	31.3
MGA_825	LOCUS_08250	sequence1:507479..507805(+)	internal_stop_codon	508091..508093(+),507803..507805(+),507827..507829(+),507896..507898(+)		WP_011183510.1	alanine--tRNA ligase	100.0	12.1	83.3
MGA_826	LOCUS_08260	sequence1:508397..509737(+)	internal_stop_codon	508304..508306(+),509825..509827(+),509735..509737(+)		WP_011166380.1	alanine--tRNA ligase	100.0	49.8	51.1
MGA_837	LOCUS_08370	sequence1:517386..517766(+)	partial			WP_000203630.1	transcription antitermination factor NusB	65.1	59.0	31.7
MGA_838	LOCUS_08380	sequence1:517868..518506(+)	internal_stop_codon	518504..518506(+)		WP_000415249.1	exodeoxyribonuclease VII large subunit	100.0	46.7	48.1
MGA_841	LOCUS_08410	sequence1:520061..520966(+)	internal_stop_codon	520964..520966(+)		WP_010880536.1	1-deoxy-D-xylulose-5-phosphate synthase	93.0	45.7	41.4
MGA_842	LOCUS_08420	sequence1:521036..521488(+)	internal_stop_codon	520964..520966(+)		WP_010932029.1	1-deoxy-D-xylulose-5-phosphate synthase	89.3	20.7	45.5
MGA_846	LOCUS_08460	sequence1:523863..523997(+)	frameshift,internal_stop_codon	524135..524137(+),523675..523677(+),523997..523999(+)	523857,523833,523622,523671	WP_010890797.1	B3/4 domain-containing protein	95.5	17.0	61.9
MGA_872	LOCUS_08720	sequence1:539988..540182(+)	internal_stop_codon	540180..540182(+),539937..539939(+)		WP_011183502.1	amino acid permease	79.7	11.0	51.0
MGA_878	LOCUS_08780	sequence1:544850..545056(-)	partial			WP_004138603.1	ABC transporter ATP-binding protein	73.5	19.7	48.0
MGA_888	LOCUS_08880	sequence1:553912..554631(+)	internal_stop_codon	553891..553893(+),554629..554631(+),554893..554895(+)		WP_011166529.1	aspartate--tRNA ligase	100.0	41.3	56.5
MGA_889	LOCUS_08890	sequence1:554632..554895(+)	internal_stop_codon	555046..555048(+),555085..555087(+),555112..555114(+),554629..554631(+),554893..554895(+)		WP_010881092.1	aspartate--tRNA ligase	93.1	13.6	46.3
MGA_890	LOCUS_08900	sequence1:555298..555567(+)	internal_stop_codon	555046..555048(+),555112..555114(+),555085..555087(+)		WP_011166529.1	aspartate--tRNA ligase	96.6	15.0	54.7
MGA_892	LOCUS_08920	sequence1:556288..556440(+)	internal_stop_codon	556438..556440(+)		WP_000067891.1	transketolase	90.0	6.8	71.1
MGA_893	LOCUS_08930	sequence1:556603..556797(+)	internal_stop_codon	556795..556797(+),556438..556440(+),556906..556908(+)		WP_002295818.1	transketolase	100.0	9.6	73.4
MGA_895	LOCUS_08950	sequence1:557383..558009(+)	internal_stop_codon	557380..557382(+),558007..558009(+),557104..557106(+),557194..557196(+),558103..558105(+)		WP_011183246.1	transketolase	99.5	31.8	62.2
MGA_903	LOCUS_09030	sequence1:565454..565651(-)	internal_stop_codon	565454..565456(-),565412..565414(-),565766..565768(-),565391..565393(-),565664..565666(-),565409..565411(-),565334..565336(-)		WP_011166321.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	98.5	24.0	54.7
MGA_905	LOCUS_09050	sequence1:567061..567195(+)	internal_stop_codon	567193..567195(+)		WP_011183206.1	DNA topoisomerase IV subunit B	88.6	6.0	82.1
MGA_906	LOCUS_09060	sequence1:567604..568722(+)	internal_stop_codon	568939..568941(+),568720..568722(+),568819..568821(+)		WP_002381887.1	DNA topoisomerase IV subunit B	99.5	54.6	58.0
MGA_909	LOCUS_09090	sequence1:569929..570222(+)	internal_stop_codon	570220..570222(+)		WP_011183207.1	DNA topoisomerase IV subunit A	97.9	10.5	73.7
MGA_910	LOCUS_09100	sequence1:570247..571446(+)	internal_stop_codon	571444..571446(+),571537..571539(+),570220..570222(+)		WP_011183207.1	DNA topoisomerase IV subunit A	100.0	43.9	58.9
MGA_911	LOCUS_09110	sequence1:571630..572163(+)	internal_stop_codon	571537..571539(+),571444..571446(+)		WP_001147466.1	DNA topoisomerase IV subunit A	94.4	21.1	35.9
MGA_913	LOCUS_09130	sequence1:573131..573910(+)	partial			WP_009902391.1	ABC transporter ATP-binding protein	77.2	68.2	32.4
MGA_943	LOCUS_09430	sequence1:594642..595067(+)	internal_stop_codon	595074..595076(+),595065..595067(+),595107..595109(+)		WP_011182943.1	FMN-dependent NADH-azoreductase	98.6	69.8	56.8
MGA_946	LOCUS_09460	sequence1:596488..596838(+)	internal_stop_codon	596434..596436(+),596836..596838(+),596437..596439(+)		WP_011070558.1	AbgT family transporter	89.7	20.2	47.6
MGA_959	LOCUS_09590	sequence1:606296..606571(+)	frameshift,internal_stop_codon	606755..606757(+)	606562	WP_011166731.1	DNA polymerase IV	92.3	20.9	44.0
MGA_966	LOCUS_09660	sequence1:610959..611264(+)	internal_stop_codon	611262..611264(+),611355..611357(+)		WP_011183360.1	ATP-binding cassette domain-containing protein	71.3	7.5	47.2
MGA_967	LOCUS_09670	sequence1:611412..611894(+)	internal_stop_codon	611262..611264(+),611355..611357(+)		WP_011166519.1	ABC transporter ATP-binding protein	53.1	36.3	36.0
MGA_983	LOCUS_09830	sequence1:623563..623829(-)	internal_stop_codon	623563..623565(-)		WP_002366931.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	95.5	27.2	51.2
MGA_984	LOCUS_09840	sequence1:624453..624806(-)	partial			WP_014584372.1	Cof-type HAD-IIB family hydrolase	59.0	24.0	40.6
MGA_987	LOCUS_09870	sequence1:626676..627197(-)	internal_stop_codon	627357..627359(-)		WP_011183222.1	SGNH/GDSL hydrolase family protein	76.9	32.0	27.1
MGA_988	LOCUS_09880	sequence1:627357..627728(-)	internal_stop_codon	627357..627359(-)		WP_011183222.1	SGNH/GDSL hydrolase family protein	95.1	28.5	38.8
MGA_993	LOCUS_09930	sequence1:630949..631386(+)	internal_stop_codon	631525..631527(+),631384..631386(+)		WP_010880999.1	(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	100.0	40.6	55.2
MGA_995	LOCUS_09950	sequence1:631537..632007(+)	internal_stop_codon	631525..631527(+),631384..631386(+)		WP_010886567.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	98.7	41.9	47.5
MGA_999	LOCUS_09990	sequence1:635544..635783(-)	internal_stop_codon	635805..635807(-),635544..635546(-)		WP_011183171.1	YitT family protein	75.9	11.7	45.0
MGA_1006	LOCUS_10060	sequence1:638905..639216(-)	internal_stop_codon	639403..639405(-)		WP_011183203.1	uridine kinase	94.2	46.6	64.9
MGA_1007	LOCUS_10070	sequence1:639403..639555(-)	internal_stop_codon	639403..639405(-)		WP_011183203.1	uridine kinase	82.0	20.2	66.7
MGA_1008	LOCUS_10080	sequence1:640027..640275(-)	internal_stop_codon	640276..640278(-),639979..639981(-),640399..640401(-),640471..640473(-),640360..640362(-),640315..640317(-),640027..640029(-)		WP_011183501.1	ABC transporter	100.0	9.6	52.4
MGA_1012	LOCUS_10120	sequence1:642716..642979(-)	internal_stop_codon	642986..642988(-),642980..642982(-)		WP_011166496.1	APC family permease	96.6	16.5	38.2
MGA_1014	LOCUS_10140	sequence1:645352..645651(-)	internal_stop_codon	645178..645180(-),645352..645354(-)		WP_011183306.1	elongation factor P	98.0	52.4	60.8
MGA_1018	LOCUS_10180	sequence1:648801..649304(-)	frameshift,internal_stop_codon	648660..648662(-),649566..649568(-)	648839	WP_011166322.1	ABC-F family ATP-binding cassette domain-containing protein	97.0	31.8	52.1
MGA_1019	LOCUS_10190	sequence1:649566..650156(-)	internal_stop_codon	649566..649568(-)		WP_011166322.1	ABC-F family ATP-binding cassette domain-containing protein	100.0	38.3	60.7
MGA_1020	LOCUS_10200	sequence1:650177..650329(-)	internal_stop_codon	650333..650335(-)		WP_011101675.1	ATP-dependent RecD-like DNA helicase	100.0	5.9	48.0
MGA_1022	LOCUS_10220	sequence1:652340..652507(-)	internal_stop_codon	652577..652579(-),652616..652618(-)		WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	96.4	14.3	50.9
MGA_1023	LOCUS_10230	sequence1:652616..653080(-)	internal_stop_codon	652577..652579(-),653219..653221(-),652616..652618(-)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	99.4	40.9	66.0
MGA_1024	LOCUS_10240	sequence1:653219..653473(-)	internal_stop_codon	653219..653221(-)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	88.1	19.8	60.8
MGA_1032	LOCUS_10320	sequence1:664554..664760(-)	internal_stop_codon	664872..664874(-)		WP_011183273.1	tRNA (cytidine(34)-2'-O)-methyltransferase	98.5	37.4	62.7
MGA_1033	LOCUS_10330	sequence1:664872..665075(-)	internal_stop_codon	664872..664874(-)		WP_011166791.1	tRNA (cytidine(34)-2'-O)-methyltransferase	94.0	36.5	66.7
MGA_1034	LOCUS_10340	sequence1:665062..665319(-)	internal_stop_codon	665404..665406(-)		WP_001830169.1	XTP/dITP diphosphatase	96.5	40.5	41.5
MGA_1035	LOCUS_10350	sequence1:665404..665670(-)	internal_stop_codon	665404..665406(-)		WP_011476167.1	XTP/dITP diphosphatase	100.0	44.2	50.0
MGA_1036	LOCUS_10360	sequence1:665753..666415(+)	partial			WP_197712461.1	phosphorylcholine kinase LicA	56.4	38.0	30.8
MGA_1041	LOCUS_10410	sequence1:669306..669599(+)	partial			WP_011166844.1	hypothetical protein	93.8	24.2	37.4
MGA_1045	LOCUS_10450	sequence1:671418..672899(-)	partial			WP_011183432.1	ABC transporter ATP-binding protein	99.4	70.6	46.4
MGA_1051	LOCUS_10510	sequence1:675239..675856(-)	internal_stop_codon	675899..675901(-)		WP_012869172.1	hemolysin family protein	70.7	33.6	29.5
MGA_1057	LOCUS_10570	sequence1:679544..680551(-)	frameshift,internal_stop_codon	680630..680632(-)	680244,680278	WP_011182998.1	excinuclease ABC subunit UvrC	98.2	56.1	40.2
MGA_1058	LOCUS_10580	sequence1:680630..681325(-)	internal_stop_codon	680630..680632(-)		WP_011182998.1	excinuclease ABC subunit UvrC	98.3	38.6	62.1
MGA_1059	LOCUS_10590	sequence1:681882..682004(-)	internal_stop_codon	682059..682061(-)		WP_011183087.1	50S ribosomal protein L20	95.0	31.7	73.7
MGA_1060	LOCUS_10600	sequence1:682059..682241(-)	internal_stop_codon	682059..682061(-)		WP_001138362.1	50S ribosomal protein L20	78.3	39.8	72.3
MGA_1071	LOCUS_10710	sequence1:690283..691302(-)	internal_stop_codon	691351..691353(-)		WP_011183074.1	threonine--tRNA ligase	100.0	53.3	64.7
MGA_1072	LOCUS_10720	sequence1:691351..691572(-)	internal_stop_codon	691594..691596(-),691351..691353(-)		WP_001830850.1	threonine--tRNA ligase	100.0	11.3	60.3
MGA_1075	LOCUS_10750	sequence1:692618..693049(-)	internal_stop_codon	693092..693094(-),692618..692620(-),692534..692536(-)		WP_011183072.1	pyruvate kinase	100.0	29.9	79.7
MGA_1076	LOCUS_10760	sequence1:693092..693901(-)	internal_stop_codon	693092..693094(-)		WP_011183072.1	pyruvate kinase	100.0	56.3	66.5
MGA_1077	LOCUS_10770	sequence1:693961..694647(-)	internal_stop_codon	694753..694755(-),694798..694800(-)		WP_011183071.1	6-phosphofructokinase	93.0	65.3	56.1
MGA_1078	LOCUS_10780	sequence1:694798..694944(-)	internal_stop_codon	694753..694755(-),694798..694800(-)		WP_013447579.1	6-phosphofructokinase	97.9	14.4	72.3
MGA_1080	LOCUS_10800	sequence1:695737..696120(-)	internal_stop_codon	696166..696168(-)		WP_003733232.1	translation elongation factor Ts	94.5	39.5	55.8
MGA_1081	LOCUS_10810	sequence1:696166..696357(-)	internal_stop_codon	696166..696168(-),696514..696516(-)		WP_003547835.1	translation elongation factor Ts	100.0	18.8	45.3
MGA_1082	LOCUS_10820	sequence1:696701..697351(-)	internal_stop_codon	697523..697525(-),697427..697429(-),697577..697579(-),697466..697468(-)		WP_106517497.1	30S ribosomal protein S2	72.2	49.0	36.9
MGA_1086	LOCUS_10860	sequence1:699621..700100(+)	internal_stop_codon	700098..700100(+)		WP_000071586.1	ribonuclease HIII	75.5	41.5	38.0
MGA_1094	LOCUS_10940	sequence1:704251..704901(-)	internal_stop_codon	704251..704253(-),705088..705090(-),705133..705135(-),704959..704961(-),705058..705060(-)		WP_011166763.1	isoleucine--tRNA ligase	92.1	21.7	58.8
MGA_1095	LOCUS_10950	sequence1:705133..705309(-)	internal_stop_codon	704959..704961(-),705436..705438(-),705088..705090(-),705133..705135(-),705334..705336(-),705058..705060(-)		WP_003245512.1	isoleucine--tRNA ligase	94.8	5.9	56.4
MGA_1096	LOCUS_10960	sequence1:705436..705789(-)	internal_stop_codon	706078..706080(-),705928..705930(-),705436..705438(-),705802..705804(-),705943..705945(-),705334..705336(-)		WP_011166763.1	isoleucine--tRNA ligase	95.7	12.5	56.1
MGA_1097	LOCUS_10970	sequence1:706078..706305(-)	internal_stop_codon	706078..706080(-),705928..705930(-),706351..706353(-),706540..706542(-),705802..705804(-),705943..705945(-),706363..706365(-)		WP_011166763.1	isoleucine--tRNA ligase	100.0	8.2	53.3
MGA_1106	LOCUS_11060	sequence1:711099..711536(-)	internal_stop_codon	711582..711584(-)		WP_003731975.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	97.2	44.9	47.9
MGA_1107	LOCUS_11070	sequence1:711582..712040(-)	internal_stop_codon	711582..711584(-)		WP_002355891.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	98.7	47.8	58.6
MGA_1109	LOCUS_11090	sequence1:712327..712506(-)	internal_stop_codon	712318..712320(-),712327..712329(-)		WP_011183294.1	division/cell wall cluster transcriptional repressor MraZ	100.0	35.8	49.2
MGA_1113	LOCUS_11130	sequence1:714134..714475(+)	frameshift,internal_stop_codon	714386..714388(+)	714304	WP_011183542.1	ABC transporter ATP-binding protein	46.0	22.2	51.9
MGA_1114	LOCUS_11140	sequence1:714565..714858(+)	internal_stop_codon	714385..714387(+)		WP_011183542.1	ABC transporter ATP-binding protein	100.0	40.2	46.4
MGA_1117	LOCUS_11170	sequence1:717064..717891(-)	frameshift,internal_stop_codon	717933..717935(-)	718175	WP_002288046.1	phenylalanine--tRNA ligase subunit beta	89.8	31.6	26.6
MGA_1118	LOCUS_11180	sequence1:717934..718701(-)	internal_stop_codon	717934..717936(-),718708..718710(-)		WP_011166772.1	phenylalanine--tRNA ligase subunit beta	97.3	29.8	29.6
MGA_1119	LOCUS_11190	sequence1:718708..719316(-)	internal_stop_codon	718708..718710(-),719434..719436(-)		WP_011183297.1	phenylalanine--tRNA ligase subunit beta	96.5	24.6	33.7
MGA_1120	LOCUS_11200	sequence1:719470..719640(-)	internal_stop_codon	719662..719664(-),719818..719820(-)		WP_000388219.1	phenylalanine--tRNA ligase subunit alpha	94.6	15.7	70.4
MGA_1121	LOCUS_11210	sequence1:719818..720045(-)	internal_stop_codon	719662..719664(-),720292..720294(-),719818..719820(-)		WP_011166773.1	phenylalanine--tRNA ligase subunit alpha	100.0	22.3	56.4
MGA_1122	LOCUS_11220	sequence1:720292..720507(-)	internal_stop_codon	720292..720294(-)		WP_003736387.1	phenylalanine--tRNA ligase subunit alpha	97.2	19.7	39.1
MGA_1134	LOCUS_11340	sequence1:729037..729318(-)	frameshift,internal_stop_codon	729373..729375(-)	729454	WP_011166519.1	ABC transporter ATP-binding protein	91.4	36.3	34.9
MGA_1135	LOCUS_11350	sequence1:729528..729803(-)	frameshift,internal_stop_codon	729373..729375(-)	729545,729454	WP_011387452.1	ABC transporter ATP-binding protein	73.6	11.0	46.3
MGA_1141	LOCUS_11410	sequence1:731928..732914(-)	internal_stop_codon	732951..732953(-)		WP_013447641.1	translation elongation factor 4	100.0	54.7	69.8
MGA_1142	LOCUS_11420	sequence1:732951..733730(-)	internal_stop_codon	732951..732953(-)		WP_013447641.1	translation elongation factor 4	100.0	43.2	78.4
MGA_1144	LOCUS_11440	sequence1:734376..734792(-)	internal_stop_codon	734826..734828(-)		WP_014584346.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	19.2	87.7
MGA_1145	LOCUS_11450	sequence1:734826..736535(-)	internal_stop_codon	734826..734828(-)		WP_011183426.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	79.2	71.8
MGA_1147	LOCUS_11470	sequence1:737021..737503(-)	internal_stop_codon	737021..737023(-),737600..737602(-)		WP_011183428.1	class 1b ribonucleoside-diphosphate reductase subunit beta	100.0	47.1	85.6
MGA_1152	LOCUS_11520	sequence1:741150..741470(-)	internal_stop_codon	740928..740930(-),741516..741518(-),741150..741152(-)		WP_226990850.1	sodium-dependent transporter	84.9	18.0	35.6
MGA_1154	LOCUS_11540	sequence1:742223..742903(-)	partial			WP_000627564.1	bifunctional riboflavin kinase/FAD synthetase	96.9	71.7	33.2
MGA_1158	LOCUS_11580	sequence1:745392..745880(-)	internal_stop_codon	745902..745904(-),746073..746075(-)		WP_010880496.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	87.0	35.8	39.0
MGA_1165	LOCUS_11650	sequence1:749152..750201(-)	internal_stop_codon	750349..750351(-),750310..750312(-)		WP_001985392.1	formate--tetrahydrofolate ligase	98.3	61.7	38.2
MGA_1166	LOCUS_11660	sequence1:750349..750756(-)	internal_stop_codon	750349..750351(-),750310..750312(-)		WP_000845308.1	formate--tetrahydrofolate ligase	100.0	24.6	54.0
MGA_1169	LOCUS_11690	sequence1:752830..753312(-)	frameshift		753301,753391	WP_011860736.1	ABC transporter ATP-binding protein	83.8	60.4	38.1
MGA_1176	LOCUS_11760	sequence1:756687..756962(-)	partial			WP_011183040.1	cytidine deaminase	98.9	66.7	57.8
MGA_1188	LOCUS_11880	sequence1:762141..762701(+)	internal_stop_codon	762699..762701(+)		WP_011166261.1	GMP reductase	100.0	58.1	69.9
MGA_1189	LOCUS_11890	sequence1:762714..763103(+)	internal_stop_codon	762699..762701(+)		WP_011183067.1	GMP reductase	100.0	40.3	80.6
MGA_1196	LOCUS_11960	sequence1:767262..767450(-)	internal_stop_codon	767229..767231(-),767550..767552(-),767712..767714(-),767262..767264(-),767472..767474(-)		WP_003131609.1	L-lactate dehydrogenase	98.4	19.4	59.0
MGA_1197	LOCUS_11970	sequence1:767896..768111(-)	frameshift,internal_stop_codon	767712..767714(-),767811..767813(-),767775..767777(-)	767931	WP_011183494.1	L-lactate dehydrogenase	80.3	18.0	56.1
MGA_1204	LOCUS_12040	sequence1:771557..771946(-)	partial			WP_011387629.1	ABC transporter ATP-binding protein	86.0	47.9	39.3
MGA_1210	LOCUS_12100	sequence1:774555..774839(-)	internal_stop_codon	774555..774557(-)		WP_011166276.1	hypothetical protein	93.6	31.8	35.2
MGA_1212	LOCUS_12120	sequence1:775293..776399(-)	internal_stop_codon	775293..775295(-)		WP_011166653.1	DEAD/DEAH box helicase	99.2	81.2	51.9
MGA_1219	LOCUS_12190	sequence1:779276..779503(-)	frameshift,internal_stop_codon	779590..779592(-),779779..779781(-),779776..779778(-)	779664,779298	WP_003596501.1	L-ribulose-5-phosphate 4-epimerase	88.0	27.3	43.9
MGA_1220	LOCUS_12200	sequence1:780192..780356(-)	frameshift,internal_stop_codon	780011..780013(-),780368..780370(-),780191..780193(-)	780475	WP_002386621.1	L-ribulose-5-phosphate 3-epimerase	98.1	18.5	54.7
MGA_1221	LOCUS_12210	sequence1:780452..780763(-)	frameshift,internal_stop_codon	780776..780778(-),781044..781046(-),780368..780370(-),780975..780977(-),780767..780769(-)	780466,780956	WP_002292381.1	L-ribulose-5-phosphate 3-epimerase	93.2	19.4	44.3
MGA_1222	LOCUS_12220	sequence1:780776..781000(-)	frameshift,internal_stop_codon	781068..781070(-),781197..781199(-),781044..781046(-)	780980	WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	78.4	26.6	53.4
MGA_1224	LOCUS_12240	sequence1:781197..781418(-)	frameshift,internal_stop_codon	781068..781070(-),781197..781199(-),781044..781046(-)	780980	WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	97.3	32.6	60.6
MGA_1237	LOCUS_12370	sequence1:789764..790012(-)	internal_stop_codon	790031..790033(-),789764..789766(-)		WP_011183542.1	ABC transporter ATP-binding protein	100.0	35.5	43.4
MGA_1238	LOCUS_12380	sequence1:790031..790273(-)	partial			WP_045053120.1	LPS export ABC transporter ATP-binding protein	87.5	29.8	45.8
MGA_1247	LOCUS_12470	sequence1:796729..797049(+)	internal_stop_codon	797047..797049(+)		WP_010990127.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	99.1	31.1	39.3
MGA_1248	LOCUS_12480	sequence1:797146..797610(+)	internal_stop_codon	797047..797049(+)		WP_010990127.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	94.2	42.6	40.4
MGA_1249	LOCUS_12490	sequence1:797786..798130(-)	internal_stop_codon	797786..797788(-)		WP_011166652.1	Nif3-like dinuclear metal center hexameric protein	99.1	44.2	31.6
MGA_1251	LOCUS_12510	sequence1:799057..799713(-)	internal_stop_codon	799780..799782(-),799777..799779(-)		WP_020862729.1	sigma-70 family RNA polymerase sigma factor	100.0	43.1	67.6
MGA_1252	LOCUS_12520	sequence1:799780..800415(-)	internal_stop_codon	799780..799782(-),799777..799779(-)		WP_011183167.1	sigma-70 family RNA polymerase sigma factor	99.1	48.0	51.8
MGA_1254	LOCUS_12540	sequence1:802292..802672(-)	internal_stop_codon	802811..802813(-),802961..802963(-)		WP_011166648.1	glycine--tRNA ligase	97.6	27.0	58.5
MGA_1255	LOCUS_12550	sequence1:802811..802939(-)	internal_stop_codon	802811..802813(-),802961..802963(-)		WP_001030080.1	glycine--tRNA ligase	100.0	9.1	50.0
MGA_1256	LOCUS_12560	sequence1:802961..803227(-)	internal_stop_codon	803447..803449(-),802811..802813(-),803519..803521(-),803324..803326(-),802961..802963(-)		WP_011166648.1	glycine--tRNA ligase	100.0	19.3	88.6
MGA_1259	LOCUS_12590	sequence1:804496..804795(-)	internal_stop_codon	804976..804978(-)		WP_002359745.1	GTPase Era	100.0	33.3	50.0
MGA_1260	LOCUS_12600	sequence1:804976..805392(-)	internal_stop_codon	804976..804978(-)		WP_011183163.1	GTPase Era	100.0	46.2	54.7
MGA_1262	LOCUS_12620	sequence1:806719..807171(-)	internal_stop_codon	807316..807318(-),807241..807243(-)		WP_011166548.1	PolC-type DNA polymerase III	100.0	9.9	48.3
MGA_1263	LOCUS_12630	sequence1:807316..807444(-)	internal_stop_codon	807316..807318(-),807241..807243(-),807520..807522(-)		WP_011986794.1	PolC-type DNA polymerase III	95.2	2.8	67.5
MGA_1264	LOCUS_12640	sequence1:807520..807816(-)	internal_stop_codon	807316..807318(-),807241..807243(-),807856..807858(-),807520..807522(-)		WP_011183185.1	PolC-type DNA polymerase III	100.0	6.6	73.5
MGA_1265	LOCUS_12650	sequence1:807856..808416(-)	internal_stop_codon	808480..808482(-),807856..807858(-)		WP_011166548.1	PolC-type DNA polymerase III	100.0	12.6	67.9
MGA_1266	LOCUS_12660	sequence1:808480..809508(-)	internal_stop_codon	808480..808482(-),809557..809559(-)		WP_011166548.1	PolC-type DNA polymerase III	100.0	23.6	52.0
MGA_1267	LOCUS_12670	sequence1:809557..809835(-)	internal_stop_codon	810028..810030(-),809557..809559(-),809860..809862(-)		WP_011183185.1	PolC-type DNA polymerase III	100.0	6.2	51.1
MGA_1272	LOCUS_12720	sequence1:812142..812444(-)	internal_stop_codon	812028..812030(-),812142..812144(-)		WP_011183184.1	site-2 protease family protein	82.0	19.9	56.0
MGA_1273	LOCUS_12730	sequence1:812481..813029(-)	internal_stop_codon	813033..813035(-)		WP_011861463.1	1-deoxy-D-xylulose-5-phosphate reductoisomerase	98.9	47.4	42.6
MGA_1274	LOCUS_12740	sequence1:813033..813401(-)	internal_stop_codon	813459..813461(-),813033..813035(-)		WP_008766370.1	1-deoxy-D-xylulose-5-phosphate reductoisomerase	92.6	29.2	46.1
MGA_1276	LOCUS_12760	sequence1:814791..815030(-)	internal_stop_codon	815112..815114(-),814791..814793(-),815217..815219(-)		WP_011964194.1	isoprenyl transferase	96.2	32.9	56.8
MGA_1278	LOCUS_12780	sequence1:815806..816237(-)	internal_stop_codon	815803..815805(-),815806..815808(-),815719..815721(-)		WP_011166321.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	89.5	48.1	50.0
MGA_1279	LOCUS_12790	sequence1:816346..816519(-)	internal_stop_codon	816541..816543(-)		WP_011705096.1	ribosome recycling factor	100.0	32.4	48.3
MGA_1280	LOCUS_12800	sequence1:816541..816894(-)	internal_stop_codon	816541..816543(-)		WP_010947438.1	ribosome recycling factor	98.3	62.2	47.0
MGA_1286	LOCUS_12860	sequence1:822511..822876(-)	internal_stop_codon	822511..822513(-),822457..822459(-)		WP_011020219.1	ferritin	95.0	62.3	23.5
MGA_1288	LOCUS_12880	sequence1:823856..824104(-)	frameshift,internal_stop_codon	823856..823858(-)	823627	WP_003588846.1	NADH-dependent flavin oxidoreductase	87.8	18.9	49.3
MGA_1294	LOCUS_12940	sequence1:826665..827084(-)	frameshift,internal_stop_codon	826673..826675(-),827196..827198(-),827169..827171(-)	826691,827283	WP_000195485.1	formate C-acetyltransferase	97.8	18.3	65.0
MGA_1295	LOCUS_12950	sequence1:827281..827439(-)	frameshift,internal_stop_codon	827503..827505(-),827196..827198(-),827169..827171(-)	827283	WP_000195485.1	formate C-acetyltransferase	100.0	6.9	80.8
MGA_1296	LOCUS_12960	sequence1:827503..827700(-)	frameshift,internal_stop_codon	827769..827771(-),827856..827858(-),827910..827912(-),827502..827504(-),827967..827969(-)	827921	WP_005653814.1	formate C-acetyltransferase	100.0	8.4	70.8
MGA_1297	LOCUS_12970	sequence1:827967..828146(-)	frameshift,internal_stop_codon	827853..827855(-),827907..827909(-),827766..827768(-),827964..827966(-)	828248,827921,828410,828407	WP_003721911.1	formate C-acetyltransferase	96.6	7.8	62.1
MGA_1298	LOCUS_12980	sequence1:828212..828415(-)	frameshift,internal_stop_codon	828453..828455(-),827964..827966(-)	828489,828410,828257,828407	WP_003565434.1	formate C-acetyltransferase	80.6	7.2	64.8
MGA_1300	LOCUS_13000	sequence1:830212..830649(-)	internal_stop_codon	830749..830751(-)		WP_011166487.1	ribosome biogenesis GTP-binding protein YihA/YsxC	98.6	73.0	51.0
MGA_1307	LOCUS_13070	sequence1:833654..833875(-)	internal_stop_codon	833654..833656(-),833879..833881(-),834155..834157(-)		WP_010896089.1	leucyl aminopeptidase	94.5	13.6	43.5
MGA_1308	LOCUS_13080	sequence1:833879..834133(-)	internal_stop_codon	833654..833656(-),834254..834256(-),834155..834157(-),833879..833881(-)		WP_011182968.1	M17 family metallopeptidase	98.8	18.1	54.2
MGA_1309	LOCUS_13090	sequence1:835356..835736(+)	frameshift,internal_stop_codon	835293..835295(+),835777..835779(+),835254..835256(+)	835715	WP_008764891.1	pyridoxal phosphate-dependent aminotransferase	94.4	43.6	27.4
MGA_1310	LOCUS_13100	sequence1:835984..836403(-)	partial			WP_011182967.1	M17 family metallopeptidase	95.7	30.1	32.6
MGA_1312	LOCUS_13120	sequence1:837831..838097(-)	internal_stop_codon	838107..838109(-)		WP_020862797.1	M20 family metallopeptidase	96.6	18.9	71.8
MGA_1313	LOCUS_13130	sequence1:838107..838691(-)	internal_stop_codon	838107..838109(-),838887..838889(-)		WP_020862797.1	M20 family metallopeptidase	95.9	41.9	43.6
MGA_1314	LOCUS_13140	sequence1:838887..839180(-)	internal_stop_codon	838887..838889(-)		WP_020862797.1	M20 family metallopeptidase	97.9	21.2	47.4
MGA_1316	LOCUS_13160	sequence1:839797..840357(-)	internal_stop_codon	839797..839799(-),839614..839616(-)		WP_004398764.1	radical SAM family heme chaperone HemW	98.9	49.3	41.0
MGA_1328	LOCUS_13280	sequence1:850659..850844(-)	internal_stop_codon	850908..850910(-)		WP_207253450.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	95.1	13.7	56.9
MGA_1329	LOCUS_13290	sequence1:850908..851690(-)	internal_stop_codon	850908..850910(-),851691..851693(-)		WP_207253450.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	98.8	60.9	47.3
MGA_1331	LOCUS_13310	sequence1:851930..852523(-)	partial			WP_011166418.1	guanylate kinase	92.4	61.3	59.3
MGA_1334	LOCUS_13340	sequence1:855187..855786(+)	internal_stop_codon	855784..855786(+)		WP_011166843.1	ribonuclease J	84.4	27.5	78.0
MGA_1335	LOCUS_13350	sequence1:855820..856572(+)	internal_stop_codon	856570..856572(+),855784..855786(+)		WP_011166843.1	ribonuclease J	100.0	41.0	66.0
MGA_1336	LOCUS_13360	sequence1:856660..856953(+)	internal_stop_codon	856570..856572(+)		WP_011183468.1	ribonuclease J	100.0	16.5	76.3
MGA_1339	LOCUS_13390	sequence1:858199..858471(-)	internal_stop_codon	858199..858201(-),858151..858153(-)		WP_011183393.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	88.9	59.7	55.4
MGA_1340	LOCUS_13400	sequence1:858650..859078(+)	internal_stop_codon	859076..859078(+),858635..858637(+)		WP_001974160.1	NAD(P)/FAD-dependent oxidoreductase	95.1	40.5	40.9
MGA_1342	LOCUS_13420	sequence1:860574..860993(-)	frameshift,internal_stop_codon	860546..860548(-),861014..861016(-),860573..860575(-),860414..860416(-),861062..861064(-)	861155,861052	WP_011183460.1	transporter	100.0	21.6	36.5
MGA_1343	LOCUS_13430	sequence1:861105..861476(-)	frameshift,internal_stop_codon	861014..861016(-),861062..861064(-)	861155,861052	WP_011183460.1	transporter	87.8	15.7	38.0
MGA_1350	LOCUS_13500	sequence1:864366..864920(-)	internal_stop_codon	864978..864980(-)		WP_011183400.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	100.0	34.8	64.9
MGA_1351	LOCUS_13510	sequence1:864978..865766(-)	internal_stop_codon	865833..865835(-),865788..865790(-),864978..864980(-),865899..865901(-)		WP_011166985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	100.0	50.1	47.0
MGA_1352	LOCUS_13520	sequence1:866263..866574(-)	partial			WP_011183401.1	Cof-type HAD-IIB family hydrolase	89.3	33.7	35.9
MGA_1359	LOCUS_13590	sequence1:870125..870997(-)	frameshift,internal_stop_codon	871025..871027(-)	871072,871027,871084	WP_011166605.1	recombinase RecA	55.9	46.7	56.8
MGA_1360	LOCUS_13600	sequence1:871061..871228(-)	frameshift,internal_stop_codon	871025..871027(-)	871072,871027,871084	WP_011166605.1	recombinase RecA	85.5	13.6	57.4
MGA_1362	LOCUS_13620	sequence1:872099..872260(+)	internal_stop_codon	872465..872467(+),872450..872452(+),872258..872260(+),872024..872026(+),872348..872350(+)		WP_020863053.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	100.0	26.8	60.4
MGA_1364	LOCUS_13640	sequence1:872946..873203(+)	internal_stop_codon	873201..873203(+),872904..872906(+),873366..873368(+)		WP_000167663.1	SDR family oxidoreductase	100.0	31.8	43.5
MGA_1375	LOCUS_13750	sequence1:881606..881932(-)	partial			WP_118838319.1	DivIVA domain-containing protein	85.2	23.1	31.5
MGA_1381	LOCUS_13810	sequence1:885649..886089(-)	internal_stop_codon	885649..885651(-)		WP_013098856.1	Gfo/Idh/MocA family oxidoreductase	94.5	41.9	42.1
MGA_1385	LOCUS_13850	sequence1:887561..887755(-)	internal_stop_codon	887903..887905(-)		WP_010964597.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	93.8	24.0	41.7
MGA_1386	LOCUS_13860	sequence1:887903..888280(-)	internal_stop_codon	887903..887905(-)		WP_011016991.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	84.0	45.5	26.2
MGA_1389	LOCUS_13890	sequence1:890144..890701(-)	partial			WP_009892118.1	ECF transporter S component	56.8	49.5	38.1
MGA_1391	LOCUS_13910	sequence1:891455..891586(-)	internal_stop_codon	891683..891685(-)		WP_000103955.1	phosphopyruvate hydratase	86.0	8.6	70.3
MGA_1392	LOCUS_13920	sequence1:891683..891973(-)	internal_stop_codon	891683..891685(-),891977..891979(-),892187..892189(-)		WP_011166450.1	phosphopyruvate hydratase	100.0	21.3	64.6
MGA_1393	LOCUS_13930	sequence1:892286..892723(-)	internal_stop_codon	892286..892288(-),892751..892753(-),892187..892189(-)		WP_011183366.1	phosphopyruvate hydratase	98.6	31.6	76.2
MGA_1397	LOCUS_13970	sequence1:896196..896381(-)	frameshift,internal_stop_codon	896528..896530(-)	896386	WP_011166584.1	PTS ascorbate-specific subunit IIBC	95.1	9.6	69.0
MGA_1398	LOCUS_13980	sequence1:896528..896821(-)	frameshift,internal_stop_codon	897017..897019(-),897035..897037(-),896527..896529(-)	896385,896874,896998	WP_011166584.1	PTS ascorbate-specific subunit IIBC	99.0	15.9	55.2
MGA_1399	LOCUS_13990	sequence1:896863..897042(-)	frameshift,internal_stop_codon	897257..897259(-),897017..897019(-),897035..897037(-)	896877,896998	WP_011166584.1	PTS ascorbate-specific subunit IIBC	76.3	7.5	73.3
MGA_1401	LOCUS_14010	sequence1:897328..897690(-)	internal_stop_codon	897718..897720(-)		WP_011166583.1	PTS sugar transporter subunit IIA	100.0	81.9	41.8
MGA_1404	LOCUS_14040	sequence1:899707..899958(-)	internal_stop_codon	900076..900078(-),900193..900195(-),899968..899970(-)		WP_011476514.1	aldo/keto reductase	100.0	30.1	46.4
MGA_1405	LOCUS_14050	sequence1:900289..900531(-)	internal_stop_codon	900076..900078(-),900193..900195(-),900289..900291(-)		WP_001099678.1	aldo/keto reductase	88.8	25.4	59.2
MGA_1406	LOCUS_14060	sequence1:900602..901120(-)	internal_stop_codon	901298..901300(-)		WP_011166467.1	acetate kinase	98.3	43.0	52.4
MGA_1407	LOCUS_14070	sequence1:901298..901831(-)	internal_stop_codon	901298..901300(-)		WP_000040065.1	acetate kinase	92.7	40.8	51.8
MGA_1408	LOCUS_14080	sequence1:901812..902003(-)	internal_stop_codon	902142..902144(-)		WP_011182940.1	phosphate acetyltransferase	88.9	17.4	67.9
MGA_1409	LOCUS_14090	sequence1:902142..902456(-)	internal_stop_codon	902142..902144(-),902463..902465(-)		WP_011182940.1	phosphate acetyltransferase	100.0	32.3	55.8
MGA_1410	LOCUS_14100	sequence1:902463..902783(-)	internal_stop_codon	902463..902465(-)		WP_010874784.1	phosphate acetyltransferase	98.1	32.8	35.8
MGA_1412	LOCUS_14120	sequence1:903697..904602(-)	internal_stop_codon	904666..904668(-)		WP_003229412.1	DNA polymerase III subunit alpha	98.3	26.5	29.3
MGA_1413	LOCUS_14130	sequence1:904666..906126(-)	internal_stop_codon	906217..906219(-),904666..904668(-)		WP_011183481.1	DNA polymerase III subunit alpha	97.3	48.3	50.8
MGA_1415	LOCUS_14150	sequence1:906454..906744(-)	partial			WP_010896021.1	DNA polymerase III subunit alpha	95.8	8.3	36.5
MGA_1420	LOCUS_14200	sequence1:910996..911505(-)	internal_stop_codon	911581..911583(-)		WP_011166981.1	glucosamine-6-phosphate deaminase	92.9	63.5	59.2
MGA_1429	LOCUS_14290	sequence1:918693..919142(-)	frameshift,internal_stop_codon	919156..919158(-),919268..919270(-),919210..919212(-)	919344,919337,919258,919149	WP_011166334.1	PTS transporter subunit EIIC	53.7	14.5	51.9
MGA_1432	LOCUS_14320	sequence1:920308..920520(-)	frameshift,internal_stop_codon	920308..920310(-),920551..920553(-)	920184,920108	WP_011263815.1	SIS domain-containing protein	64.3	11.3	57.8
MGA_1433	LOCUS_14330	sequence1:920551..920778(-)	internal_stop_codon	920872..920874(-),920308..920310(-),920788..920790(-),920551..920553(-)		WP_002357242.1	SIS domain-containing protein	97.3	19.7	49.4
MGA_1435	LOCUS_14350	sequence1:921382..921918(+)	internal_stop_codon	921346..921348(+)		WP_010966238.1	DeoR/GlpR family DNA-binding transcription regulator	91.6	63.8	34.1
MGA_1437	LOCUS_14370	sequence1:923090..923647(-)	internal_stop_codon	923663..923665(-)		WP_011166502.1	ribulose-phosphate 3-epimerase	98.9	81.8	49.5
MGA_1438	LOCUS_14380	sequence1:923766..924056(-)	partial			WP_010906200.1	ribosome small subunit-dependent GTPase A	96.9	30.3	41.9
MGA_1439	LOCUS_14390	sequence1:924186..924647(-)	internal_stop_codon	924186..924188(-)		WP_001162036.1	ribosome small subunit-dependent GTPase A	95.4	49.3	43.0
MGA_1440	LOCUS_14400	sequence1:924653..925663(-)	partial			WP_002287377.1	Stk1 family PASTA domain-containing Ser/Thr kinase	81.2	39.6	41.0
MGA_1441	LOCUS_14410	sequence1:926186..926362(-)	internal_stop_codon	926432..926434(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	98.3	22.4	49.1
MGA_1442	LOCUS_14420	sequence1:926432..926680(-)	internal_stop_codon	926432..926434(-),926738..926740(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	100.0	32.3	40.2
MGA_1443	LOCUS_14430	sequence1:926738..926944(-)	internal_stop_codon	926738..926740(-)		WP_011166505.1	protein phosphatase 2C domain-containing protein	97.1	46.8	42.4
MGA_1445	LOCUS_14450	sequence1:928135..928596(-)	internal_stop_codon	928597..928599(-)		WP_020862982.1	PTS transporter subunit EIIC	97.4	20.0	52.7
MGA_1446	LOCUS_14460	sequence1:928597..929229(-)	internal_stop_codon	929518..929520(-),929248..929250(-),928597..928599(-),929251..929253(-),929365..929367(-)		WP_011183111.1	PTS transporter subunit EIIC	69.0	20.6	67.1
MGA_1447	LOCUS_14470	sequence1:929731..930009(-)	internal_stop_codon	930034..930036(-),929518..929520(-)		WP_011183111.1	PTS transporter subunit EIIC	54.3	7.1	64.0
MGA_1448	LOCUS_14480	sequence1:930034..930159(-)	internal_stop_codon	930034..930036(-)		WP_020862982.1	PTS transporter subunit EIIC	97.6	5.4	70.0
MGA_1451	LOCUS_14510	sequence1:932106..932426(-)	frameshift,internal_stop_codon	932442..932444(-)	932536,932481	WP_010966161.1	metal ABC transporter ATP-binding protein	83.0	40.9	41.1
MGA_1455	LOCUS_14550	sequence1:935110..935280(-)	internal_stop_codon	935110..935112(-)		WP_009967250.1	glucose-induced regulator RulR	89.3	54.9	64.0
MGA_1457	LOCUS_14570	sequence1:935724..936731(-)	internal_stop_codon	935724..935726(-),935667..935669(-)		WP_011166545.1	transcription termination factor NusA	100.0	57.5	43.5
MGA_1458	LOCUS_14580	sequence1:937499..937729(-)	frameshift,internal_stop_codon	937765..937767(-)	937806	WP_011861381.1	class I SAM-dependent methyltransferase	100.0	31.1	59.2
MGA_1460	LOCUS_14600	sequence1:939030..939482(-)	internal_stop_codon	939543..939545(-),939495..939497(-)		WP_011183141.1	HD domain-containing protein	97.3	46.9	51.0
MGA_1463	LOCUS_14630	sequence1:940032..940409(-)	internal_stop_codon	940449..940451(-)		WP_205421581.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	88.8	17.9	32.2
MGA_1465	LOCUS_14650	sequence1:941979..942248(-)	internal_stop_codon	942522..942524(-),942378..942380(-)		WP_011183017.1	phospho-sugar mutase	94.4	15.0	56.0
MGA_1466	LOCUS_14660	sequence1:942378..942509(-)	internal_stop_codon	942522..942524(-),942378..942380(-)		WP_011166989.1	phospho-sugar mutase	100.0	7.7	58.1
MGA_1467	LOCUS_14670	sequence1:942522..943652(-)	internal_stop_codon	942522..942524(-),942378..942380(-)		WP_011166989.1	phospho-sugar mutase	97.6	65.4	48.8
MGA_1468	LOCUS_14680	sequence1:943790..944236(-)	internal_stop_codon	944255..944257(-)		WP_011166672.1	phosphate signaling complex protein PhoU	91.9	60.7	38.2
MGA_1470	LOCUS_14700	sequence1:944465..944731(-)	internal_stop_codon	944819..944821(-)		WP_011166671.1	phosphate ABC transporter ATP-binding protein PstB	100.0	37.9	70.5
MGA_1471	LOCUS_14710	sequence1:944819..945274(-)	internal_stop_codon	944819..944821(-)		WP_164704003.1	phosphate ABC transporter ATP-binding protein PstB	87.4	49.4	60.6
MGA_1473	LOCUS_14730	sequence1:945572..946072(-)	frameshift,internal_stop_codon	945571..945573(-),946159..946161(-),945572..945574(-)	946287	WP_011183131.1	phosphate ABC transporter permease PstA	100.0	23.2	55.4
MGA_1474	LOCUS_14740	sequence1:946160..946876(-)	internal_stop_codon	947078..947080(-),946160..946162(-)		WP_011183131.1	phosphate ABC transporter permease PstA	99.2	34.0	45.7
MGA_1480	LOCUS_14800	sequence1:951563..951703(-)	internal_stop_codon	951563..951565(-)		WP_011183129.1	AAA family ATPase	100.0	4.6	73.9
MGA_1481	LOCUS_14810	sequence1:951953..952369(-)	internal_stop_codon	951953..951955(-),952592..952594(-)		WP_011017155.1	glutamine-hydrolyzing GMP synthase	98.6	26.6	70.6
MGA_1482	LOCUS_14820	sequence1:952781..952981(-)	internal_stop_codon	952982..952984(-),953267..953269(-),952592..952594(-),952781..952783(-)		WP_011183239.1	glutamine-hydrolyzing GMP synthase	100.0	12.9	54.5
MGA_1483	LOCUS_14830	sequence1:952982..953134(-)	internal_stop_codon	952982..952984(-),953267..953269(-),952781..952783(-)		WP_012545424.1	glutamine-hydrolyzing GMP synthase	92.0	9.0	65.2
MGA_1484	LOCUS_14840	sequence1:953367..953891(-)	partial			WP_003723741.1	bifunctional tRNA lysidine(34) synthetase TilS/hypoxanthine phosphoribosyltransferase HprT	100.0	27.0	43.2
MGA_1488	LOCUS_14880	sequence1:955943..956296(-)	partial			WP_011183433.1	DNA-processing protein DprA	100.0	44.0	42.7
MGA_1491	LOCUS_14910	sequence1:958136..958588(-)	internal_stop_codon	957980..957982(-),958136..958138(-),958085..958087(-)		WP_011674494.1	ribosome biogenesis GTPase YlqF	100.0	52.4	50.0
MGA_1500	LOCUS_15000	sequence1:961701..961868(-)	internal_stop_codon	961701..961703(-)		WP_011166609.1	30S ribosomal protein S16	100.0	50.9	65.5
MGA_1501	LOCUS_15010	sequence1:962815..963396(-)	internal_stop_codon	963589..963591(-),962815..962817(-),963493..963495(-)		WP_011166850.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	58.9	65.5
MGA_1502	LOCUS_15020	sequence1:963589..963747(-)	internal_stop_codon	963589..963591(-),963493..963495(-)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	96.2	14.8	68.0
MGA_1508	LOCUS_15080	sequence1:967095..968042(-)	frameshift,internal_stop_codon	967334..967336(-),967301..967303(-),967307..967309(-),967094..967096(-)	967436,967279	WP_011166852.1	DnaD domain protein	99.0	80.5	25.0
MGA_1510	LOCUS_15100	sequence1:968564..968965(-)	internal_stop_codon	968477..968479(-),968564..968566(-),968495..968497(-),968459..968461(-),968558..968560(-)		WP_011182958.1	folate family ECF transporter S component	98.5	56.7	39.7
MGA_1511	LOCUS_15110	sequence1:969112..969753(-)	internal_stop_codon	969112..969114(-),969760..969762(-),969070..969072(-)		WP_011167091.1	Mur ligase family protein	97.7	55.3	41.7
MGA_1512	LOCUS_15120	sequence1:969760..970095(-)	internal_stop_codon	969760..969762(-)		WP_011182957.1	Mur ligase family protein	100.0	30.2	52.7
MGA_1513	LOCUS_15130	sequence1:970104..970907(-)	internal_stop_codon	970968..970970(-)		WP_011182956.1	excinuclease ABC subunit UvrA	98.9	27.7	74.2
MGA_1514	LOCUS_15140	sequence1:970968..971897(-)	internal_stop_codon	970968..970970(-),971973..971975(-)		WP_011182956.1	excinuclease ABC subunit UvrA	99.0	32.1	61.8
MGA_1515	LOCUS_15150	sequence1:971973..972944(-)	internal_stop_codon	971973..971975(-)		WP_011182956.1	excinuclease ABC subunit UvrA	99.4	34.0	70.0
MGA_1518	LOCUS_15180	sequence1:974395..974862(-)	internal_stop_codon	974866..974868(-),974395..974397(-)		WP_164919794.1	triose-phosphate isomerase	100.0	62.5	56.8
MGA_1519	LOCUS_15190	sequence1:975401..975868(-)	internal_stop_codon	975983..975985(-)		WP_011182963.1	DNA-binding protein WhiA	97.4	47.6	44.7
MGA_1520	LOCUS_15200	sequence1:975983..976336(-)	internal_stop_codon	975983..975985(-)		WP_011182963.1	DNA-binding protein WhiA	96.6	35.3	32.7
MGA_1522	LOCUS_15220	sequence1:976616..978757(-)	internal_stop_codon	976616..976618(-)		WP_011166299.1	preprotein translocase subunit SecA	99.6	75.2	62.8
MGA_1524	LOCUS_15240	sequence1:979526..979843(-)	internal_stop_codon	979883..979885(-)		WP_011183322.1	ABC transporter B family permease/ATP-binding protein	96.2	16.6	75.5
MGA_1525	LOCUS_15250	sequence1:979883..980374(-)	internal_stop_codon	979883..979885(-),980390..980392(-)		WP_011183322.1	ABC transporter B family permease/ATP-binding protein	96.9	26.1	61.2
MGA_1526	LOCUS_15260	sequence1:980390..980782(-)	internal_stop_codon	980801..980803(-),980390..980392(-)		WP_011166618.1	ABC transporter ATP-binding protein	82.3	16.9	34.6
MGA_1527	LOCUS_15270	sequence1:980801..981025(-)	internal_stop_codon	980801..980803(-)		WP_011183432.1	ABC transporter ATP-binding protein	78.4	8.8	41.4
MGA_1529	LOCUS_15290	sequence1:981581..981811(-)	internal_stop_codon	981821..981823(-)		WP_001829665.1	phosphoglycerate kinase	100.0	19.2	73.7
MGA_1530	LOCUS_15300	sequence1:981821..982243(-)	internal_stop_codon	981821..981823(-),982355..982357(-)		WP_011183475.1	phosphoglycerate kinase	99.3	34.2	66.9
MGA_1531	LOCUS_15310	sequence1:982355..982816(-)	internal_stop_codon	982355..982357(-)		WP_011183475.1	phosphoglycerate kinase	98.7	34.7	57.6
MGA_1533	LOCUS_15330	sequence1:983832..984110(-)	internal_stop_codon	984363..984365(-)		WP_011167088.1	prolipoprotein diacylglyceryl transferase	89.1	15.6	42.7
MGA_1536	LOCUS_15360	sequence1:986070..987422(-)	internal_stop_codon	987426..987428(-)		WP_164919771.1	excinuclease ABC subunit UvrB	98.9	66.9	64.3
MGA_1537	LOCUS_15370	sequence1:987426..988034(-)	internal_stop_codon	987426..987428(-)		WP_164919771.1	excinuclease ABC subunit UvrB	99.5	30.1	71.1
MGA_1546	LOCUS_15460	sequence1:992521..992874(-)	internal_stop_codon	992521..992523(-)		WP_026199035.1	ribose 5-phosphate isomerase B	94.0	73.8	62.7
MGA_1553	LOCUS_15530	sequence1:995727..996020(-)	internal_stop_codon	996054..996056(-)		WP_011166265.1	PTS transporter subunit EIIC	97.9	15.9	46.9
MGA_1554	LOCUS_15540	sequence1:996054..996422(-)	internal_stop_codon	996567..996569(-),996054..996056(-),996492..996494(-)		WP_011166265.1	PTS transporter subunit EIIC	98.4	20.7	65.8
MGA_1556	LOCUS_15560	sequence1:996852..997400(-)	internal_stop_codon	996567..996569(-),996852..996854(-),997410..997412(-),997434..997436(-)		WP_011166265.1	PTS transporter subunit EIIC	99.5	31.6	53.0
MGA_1557	LOCUS_15570	sequence1:997625..998227(-)	internal_stop_codon	997625..997627(-),997580..997582(-)		WP_011166737.1	N-acetylmannosamine-6-phosphate 2-epimerase	94.5	83.2	64.0
MGA_1560	LOCUS_15600	sequence1:999468..1001162(-)	internal_stop_codon	1001292..1001294(-),999468..999470(-)		WP_011167023.1	magnesium-translocating P-type ATPase	97.9	60.0	60.7
MGA_1561	LOCUS_15610	sequence1:1001292..1001645(-)	internal_stop_codon	1001292..1001294(-),1001688..1001690(-)		WP_011167023.1	magnesium-translocating P-type ATPase	96.6	13.2	47.6
MGA_1566	LOCUS_15660	sequence1:1004579..1005178(-)	internal_stop_codon	1005461..1005463(-),1005251..1005253(-)		WP_002286405.1	tyrosine--tRNA ligase	97.5	46.4	48.5
MGA_1567	LOCUS_15670	sequence1:1005251..1005424(-)	internal_stop_codon	1005461..1005463(-),1005251..1005253(-)		WP_011183485.1	tyrosine--tRNA ligase	100.0	13.8	71.9
MGA_1568	LOCUS_15680	sequence1:1005461..1005661(-)	internal_stop_codon	1005791..1005793(-),1005461..1005463(-),1005251..1005253(-)		WP_011166856.1	tyrosine--tRNA ligase	95.5	15.2	52.4
MGA_1575	LOCUS_15750	sequence1:1010077..1010868(-)	internal_stop_codon	1010893..1010895(-)		WP_001076673.1	M42 family metallopeptidase	92.0	69.0	39.3
MGA_1576	LOCUS_15760	sequence1:1010893..1011183(-)	internal_stop_codon	1010893..1010895(-)		WP_001031503.1	M42 family metallopeptidase	96.9	25.2	37.6
MGA_1578	LOCUS_15780	sequence1:1011597..1011965(+)	internal_stop_codon	1011963..1011965(+),1011513..1011515(+),1011369..1011371(+)		WP_011166859.1	DegV family protein	97.5	43.0	48.3
MGA_1579	LOCUS_15790	sequence1:1012146..1012727(+)	internal_stop_codon	1012725..1012727(+),1012875..1012877(+)		WP_020862886.1	DegV family protein	88.6	61.8	37.1
MGA_1580	LOCUS_15800	sequence1:1013751..1013993(-)	internal_stop_codon	1013751..1013753(-),1013616..1013618(-)		WP_011166861.1	transcriptional repressor	95.0	49.4	59.2
MGA_1584	LOCUS_15840	sequence1:1015836..1016447(-)	internal_stop_codon	1016481..1016483(-)		WP_011183374.1	proline--tRNA ligase	100.0	42.9	53.4
MGA_1585	LOCUS_15850	sequence1:1016481..1016723(-)	internal_stop_codon	1016784..1016786(-),1016481..1016483(-),1016829..1016831(-)		WP_011183374.1	proline--tRNA ligase	100.0	16.9	71.2
MGA_1586	LOCUS_15860	sequence1:1016829..1016969(-)	internal_stop_codon	1017207..1017209(-),1016784..1016786(-),1017117..1017119(-),1016829..1016831(-)		WP_011166523.1	proline--tRNA ligase	100.0	9.7	65.2
MGA_1588	LOCUS_15880	sequence1:1018126..1019109(-)	internal_stop_codon	1019362..1019364(-)		WP_011166358.1	cardiolipin synthase	98.8	63.3	45.9
MGA_1595	LOCUS_15950	sequence1:1022746..1023111(-)	internal_stop_codon	1023118..1023120(-)		WP_013447978.1	potassium transporter TrkG	100.0	24.4	36.9
MGA_1596	LOCUS_15960	sequence1:1023118..1023300(-)	internal_stop_codon	1023310..1023312(-),1023499..1023501(-),1023118..1023120(-)		WP_013447978.1	potassium transporter TrkG	98.3	11.1	71.2
MGA_1598	LOCUS_15980	sequence1:1023691..1024062(-)	internal_stop_codon	1023691..1023693(-),1023679..1023681(-),1024078..1024080(-),1023499..1023501(-)		WP_164919774.1	TrkH family potassium uptake protein	88.6	19.5	50.5
MGA_1599	LOCUS_15990	sequence1:1024078..1024350(-)	internal_stop_codon	1024078..1024080(-)		WP_164919774.1	TrkH family potassium uptake protein	87.8	11.6	44.3
MGA_1600	LOCUS_16000	sequence1:1024469..1025167(+)	partial			WP_011183062.1	NAD-binding protein	95.7	74.7	44.9
MGA_1601	LOCUS_16010	sequence1:1026087..1026653(-)	internal_stop_codon	1026675..1026677(-)		WP_011183060.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	97.3	38.4	42.4
MGA_1602	LOCUS_16020	sequence1:1026675..1027529(-)	internal_stop_codon	1026675..1026677(-)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	99.6	59.3	65.5
MGA_1605	LOCUS_16050	sequence1:1029316..1030098(-)	internal_stop_codon	1030120..1030122(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	99.6	38.8	50.2
MGA_1606	LOCUS_16060	sequence1:1030120..1030290(-)	internal_stop_codon	1030525..1030527(-),1030120..1030122(-),1030399..1030401(-)		WP_011393509.1	NAD-dependent DNA ligase LigA	91.1	7.7	64.7
MGA_1607	LOCUS_16070	sequence1:1030525..1031193(-)	internal_stop_codon	1031254..1031256(-),1030525..1030527(-),1030399..1030401(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	100.0	33.2	56.1
MGA_1626	LOCUS_16260	sequence1:1040778..1041002(-)	internal_stop_codon	1041009..1041011(-)		WP_003722867.1	phosphoenolpyruvate--protein phosphotransferase	95.9	12.4	57.7
MGA_1627	LOCUS_16270	sequence1:1041009..1041599(-)	internal_stop_codon	1041789..1041791(-),1041009..1041011(-)		WP_000174207.1	phosphoenolpyruvate--protein phosphotransferase	100.0	34.6	74.6
MGA_1628	LOCUS_16280	sequence1:1041789..1042508(-)	internal_stop_codon	1041789..1041791(-)		WP_011166470.1	phosphoenolpyruvate--protein phosphotransferase	99.6	41.5	53.4
MGA_1632	LOCUS_16320	sequence1:1044463..1044789(-)	internal_stop_codon	1044826..1044828(-)		WP_011183505.1	50S ribosomal protein L1	98.1	46.7	58.5
MGA_1633	LOCUS_16330	sequence1:1044826..1045149(-)	internal_stop_codon	1044826..1044828(-)		WP_011183505.1	50S ribosomal protein L1	100.0	47.1	70.1
MGA_1639	LOCUS_16390	sequence1:1048113..1048403(-)	frameshift,internal_stop_codon	1048460..1048462(-)	1048490,1048681,1048650,1048610	WP_011182996.1	alpha/beta hydrolase	100.0	31.1	43.8
MGA_1640	LOCUS_16400	sequence1:1048658..1048918(-)	frameshift,internal_stop_codon	1048459..1048461(-)	1048609,1048489,1048683,1048652,1048909,1048927	WP_011182996.1	alpha/beta hydrolase	89.5	25.2	51.3
MGA_1643	LOCUS_16430	sequence1:1049521..1049679(-)	frameshift,internal_stop_codon	1049400..1049402(-),1049313..1049315(-)	1049387,1049523	WP_011167023.1	magnesium-translocating P-type ATPase	100.0	5.5	59.6
MGA_1647	LOCUS_16470	sequence1:1051923..1052432(-)	internal_stop_codon	1052529..1052531(-),1052463..1052465(-)		WP_001074405.1	Fe-S cluster assembly protein SufB	100.0	36.3	65.1
MGA_1648	LOCUS_16480	sequence1:1052529..1053182(-)	internal_stop_codon	1052529..1052531(-),1052463..1052465(-),1053183..1053185(-)		WP_002893631.1	Fe-S cluster assembly protein SufB	100.0	46.2	67.3
MGA_1651	LOCUS_16510	sequence1:1053800..1054294(-)	internal_stop_codon	1054331..1054333(-)		WP_172824500.1	cysteine desulfurase	95.7	38.0	39.9
MGA_1652	LOCUS_16520	sequence1:1054331..1054549(-)	internal_stop_codon	1054331..1054333(-),1054655..1054657(-)		WP_011166685.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	17.5	62.5
MGA_1653	LOCUS_16530	sequence1:1054655..1055029(-)	internal_stop_codon	1054655..1054657(-)		WP_011183145.1	aminotransferase class V-fold PLP-dependent enzyme	96.8	29.4	46.7
MGA_1654	LOCUS_16540	sequence1:1055034..1055867(-)	partial			WP_003702957.1	Fe-S cluster assembly protein SufD	53.1	35.3	33.3
MGA_1665	LOCUS_16650	sequence1:1062463..1062696(-)	internal_stop_codon	1062463..1062465(-)		WP_009931845.1	thiol peroxidase	66.2	31.5	50.0
MGA_1666	LOCUS_16660	sequence1:1062700..1063209(-)	internal_stop_codon	1063210..1063212(-)		WP_011948683.1	4Fe-4S single cluster domain-containing protein	93.5	81.7	34.1
MGA_1667	LOCUS_16670	sequence1:1063290..1064252(-)	partial			WP_010875923.1	ATP-dependent Clp protease ATP-binding subunit	97.8	53.1	43.2
MGA_1671	LOCUS_16710	sequence1:1068093..1068458(-)	internal_stop_codon	1068093..1068095(-)		WP_010966238.1	DeoR/GlpR family DNA-binding transcription regulator	100.0	49.6	36.2
MGA_1678	LOCUS_16780	sequence1:1072642..1073892(-)	internal_stop_codon	1072561..1072563(-),1072642..1072644(-)		WP_164930803.1	IGHMBP2 family helicase	35.3	27.6	28.1
MGA_1680	LOCUS_16800	sequence1:1074217..1074666(-)	partial			WP_064496391.1	IGHMBP2 family helicase	72.5	16.7	38.2
MGA_1684	LOCUS_16840	sequence1:1076506..1076844(-)	internal_stop_codon	1076899..1076901(-)		WP_001260793.1	50S ribosomal protein L13	96.4	74.5	63.0
MGA_1695	LOCUS_16950	sequence1:1084574..1085218(-)	frameshift,internal_stop_codon	1084506..1084508(-),1084584..1084586(-),1085271..1085273(-)	1084648,1084466,1084590,1085198	WP_009932214.1	fructose-specific PTS transporter subunit EIIC	85.5	30.1	29.2
MGA_1698	LOCUS_16980	sequence1:1086198..1086671(-)	internal_stop_codon	1086132..1086134(-),1085928..1085930(-),1086024..1086026(-),1085973..1085975(-),1086198..1086200(-)		WP_011167107.1	ECF transporter S component	86.0	45.5	38.9
MGA_1700	LOCUS_17000	sequence1:1087561..1087809(+)	frameshift		1087788	WP_000395727.1	YigZ family protein	91.5	36.5	54.5
MGA_1701	LOCUS_17010	sequence1:1088340..1088504(-)	internal_stop_codon	1088340..1088342(-),1088187..1088189(-),1088679..1088681(-),1088610..1088612(-)		WP_001239385.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	100.0	24.9	55.6
MGA_1709	LOCUS_17090	sequence1:1095528..1095767(+)	internal_stop_codon	1095765..1095767(+)		WP_003131748.1	MBL fold metallo-hydrolase	83.5	31.4	34.8
MGA_1728	LOCUS_17280	sequence1:1108409..1109047(-)	internal_stop_codon	1108409..1108411(-)		WP_020862624.1	ABC transporter permease	99.1	12.3	22.5
MGA_1739	LOCUS_17390	sequence1:1115216..1115809(-)	internal_stop_codon	1115813..1115815(-),1115837..1115839(-)		WP_011948069.1	PTS transporter subunit EIIC	84.8	24.5	33.9
MGA_1740	LOCUS_17400	sequence1:1115837..1116172(-)	internal_stop_codon	1115813..1115815(-),1115837..1115839(-)		WP_000938894.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	89.2	19.6	59.6
MGA_1741	LOCUS_17410	sequence1:1116500..1116670(-)	internal_stop_codon	1116362..1116364(-),1116860..1116862(-),1116500..1116502(-),1116494..1116496(-),1116758..1116760(-),1116821..1116823(-)		WP_011166334.1	PTS transporter subunit EIIC	92.9	9.7	59.3
MGA_1744	LOCUS_17440	sequence1:1118123..1118557(-)	internal_stop_codon	1118123..1118125(-)		WP_012027818.1	MurR/RpiR family transcriptional regulator	92.4	48.4	30.7
MGA_1745	LOCUS_17450	sequence1:1118806..1120452(-)	internal_stop_codon	1120624..1120626(-),1120552..1120554(-)		WP_011183253.1	cation-translocating P-type ATPase	97.3	59.8	46.5
MGA_1747	LOCUS_17470	sequence1:1120624..1121193(-)	internal_stop_codon	1121233..1121235(-),1120624..1120626(-),1120552..1120554(-)		WP_011166486.1	cation-translocating P-type ATPase	96.8	19.3	51.1
MGA_1749	LOCUS_17490	sequence1:1123122..1123337(-)	internal_stop_codon	1123122..1123124(-),1122849..1122851(-)		WP_005174786.1	acetolactate decarboxylase	88.7	24.1	57.1
MGA_1750	LOCUS_17500	sequence1:1123337..1123582(-)	internal_stop_codon	1123601..1123603(-),1123817..1123819(-)		WP_000103515.1	acetolactate synthase AlsS	98.8	14.2	66.2
MGA_1751	LOCUS_17510	sequence1:1123601..1123816(-)	internal_stop_codon	1123601..1123603(-),1123817..1123819(-)		WP_010989867.1	acetolactate synthase AlsS	100.0	12.6	90.1
MGA_1753	LOCUS_17530	sequence1:1124138..1125004(-)	internal_stop_codon	1124138..1124140(-)		WP_010989867.1	acetolactate synthase AlsS	97.2	49.6	72.5
MGA_1754	LOCUS_17540	sequence1:1125185..1125469(-)	internal_stop_codon	1125476..1125478(-),1125185..1125187(-)		WP_011183540.1	class II fructose-1,6-bisphosphate aldolase	98.9	31.4	72.0
MGA_1755	LOCUS_17550	sequence1:1125476..1125925(-)	internal_stop_codon	1125476..1125478(-),1125944..1125946(-),1125185..1125187(-)		WP_011183540.1	class II fructose-1,6-bisphosphate aldolase	98.7	49.7	66.0
MGA_1756	LOCUS_17560	sequence1:1126867..1127268(-)	internal_stop_codon	1126828..1126830(-),1126798..1126800(-),1127305..1127307(-),1126867..1126869(-)		WP_020862895.1	ABC transporter permease	89.5	8.3	26.1
MGA_1761	LOCUS_17610	sequence1:1129387..1129881(-)	internal_stop_codon	1129312..1129314(-),1129945..1129947(-),1129903..1129905(-),1129387..1129389(-)		WP_011183053.1	ABC transporter permease	99.4	11.5	26.1
MGA_1764	LOCUS_17640	sequence1:1131555..1131929(-)	internal_stop_codon	1131930..1131932(-),1132113..1132115(-)		WP_010989743.1	DNA-formamidopyrimidine glycosylase	97.6	44.3	41.3
MGA_1765	LOCUS_17650	sequence1:1131930..1132103(-)	internal_stop_codon	1131930..1131932(-),1132113..1132115(-)		WP_001114478.1	DNA-formamidopyrimidine glycosylase	98.2	20.3	46.4
MGA_1766	LOCUS_17660	sequence1:1132113..1132385(-)	internal_stop_codon	1131930..1131932(-),1132113..1132115(-)		WP_002355756.1	DNA-formamidopyrimidine glycosylase	91.1	29.3	57.3
MGA_1769	LOCUS_17690	sequence1:1134595..1136016(-)	internal_stop_codon	1136089..1136091(-),1136275..1136277(-)		WP_011166854.1	DNA polymerase I	99.8	53.0	48.5
MGA_1770	LOCUS_17700	sequence1:1136275..1136634(-)	internal_stop_codon	1136674..1136676(-),1136089..1136091(-),1136275..1136277(-)		WP_011183480.1	DNA polymerase I	91.6	12.8	53.0
MGA_1771	LOCUS_17710	sequence1:1136674..1137189(-)	internal_stop_codon	1136674..1136676(-)		WP_011183480.1	DNA polymerase I	100.0	19.3	57.2
MGA_1774	LOCUS_17740	sequence1:1138905..1139288(-)	internal_stop_codon	1138905..1138907(-)		WP_000692835.1	ribonuclease M5	99.2	71.4	40.6
MGA_1775	LOCUS_17750	sequence1:1139504..1139803(+)	internal_stop_codon	1139801..1139803(+)		WP_003644658.1	rod shape-determining protein	87.9	26.1	50.6
MGA_1776	LOCUS_17760	sequence1:1139885..1140550(+)	internal_stop_codon	1139801..1139803(+)		WP_003227776.1	cell shape-determining protein Mbl	94.6	62.8	40.7
MGA_1777	LOCUS_17770	sequence1:1140979..1141377(+)	partial			WP_003234924.1	bifunctional transcriptional activator/DNA repair enzyme AdaA	71.2	46.4	42.9
MGA_1778	LOCUS_17780	sequence1:1142105..1142431(+)	internal_stop_codon	1142429..1142431(+)		WP_011404386.1	rod shape-determining protein	76.9	24.8	41.0
MGA_1779	LOCUS_17790	sequence1:1142492..1143163(+)	internal_stop_codon	1142429..1142431(+)		WP_010966142.1	rod shape-determining protein	90.1	59.1	44.8
MGA_1782	LOCUS_17820	sequence1:1145435..1145719(+)	internal_stop_codon	1145717..1145719(+)		WP_003644658.1	rod shape-determining protein	92.6	26.1	51.7
MGA_1783	LOCUS_17830	sequence1:1145801..1146487(+)	internal_stop_codon	1145717..1145719(+)		WP_003428483.1	rod shape-determining protein	91.7	61.2	47.2
MGA_1784	LOCUS_17840	sequence1:1146555..1146947(-)	internal_stop_codon	1146990..1146992(-)		WP_012545153.1	TatD family nuclease-associated radical SAM protein	98.5	28.5	50.0
MGA_1785	LOCUS_17850	sequence1:1146990..1147328(-)	internal_stop_codon	1146990..1146992(-)		WP_011182945.1	TatD family hydrolase	89.3	38.8	51.0
MGA_1790	LOCUS_17900	sequence1:1149787..1150296(-)	internal_stop_codon	1150576..1150578(-),1150300..1150302(-)		WP_011167185.1	membrane protein insertase YidC	60.4	26.3	55.8
MGA_1791	LOCUS_17910	sequence1:1150300..1150551(-)	internal_stop_codon	1150576..1150578(-),1150753..1150755(-),1150300..1150302(-)		WP_084322434.1	membrane protein insertase YidC	98.8	19.6	52.4
