{ "type": "genome", "identifier": "GCF_001038485.1", "organism": "Ornithinibacillus californiensis", "title": "Ornithinibacillus californiensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001038485.1", "bioproject": "PRJNA224116", "biosample": "SAMN03290694", "wgs_master": "LDUE00000000.1", "refseq_category": "reference genome", "taxid": "161536", "species_taxid": "161536", "organism_name": "Ornithinibacillus californiensis", "infraspecific_name": "strain=DSM 16628", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/06/23", "asm_name": "ASM103848v1", "asm_submitter": "Zhejiang University", "gbrs_paired_asm": "GCA_001038485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/038/485/GCF_001038485.1_ASM103848v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3979837", "genome_size_ungapped": "3979837", "gc_percent": "37.000000", "replicon_count": "0", "scaffold_count": "70", "contig_count": "70", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001038485.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "4117", "protein_coding_gene_count": "3981", "non_coding_gene_count": "79", "pubmed_id": "26706221" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-06-23", "dateModified": "2015-06-23", "datePublished": "2015-06-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Ornithinibacillus californiensis" ], "sample_taxid": [ "161536" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus jordanicus", "strain": "strain=GSFE11", "accession": "GCA_022095695.1", "taxid": 2867266, "species_taxid": 2867266, "relation_to_type": "type", "validated": true, "ani": 77.5344, "matched_fragments": 110, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ornithinibacillus halophilus", "strain": "strain=IBRC-M 10683", "accession": "GCA_900129485.1", "taxid": 930117, "species_taxid": 930117, "relation_to_type": "type", "validated": true, "ani": 77.4975, "matched_fragments": 236, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Virgibacillus ndiopensis", "strain": "strain=Marseille-P3835", "accession": "GCA_900187325.1", "taxid": 2004408, "species_taxid": 2004408, "relation_to_type": "type", "validated": true, "ani": 77.4358, "matched_fragments": 133, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraliobacillus quinghaiensis", "strain": "strain=CGMCC 1.6333", "accession": "GCA_014645115.1", "taxid": 470815, "species_taxid": 470815, "relation_to_type": "type", "validated": true, "ani": 77.292, "matched_fragments": 68, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus halophilus", "strain": "strain=DSM 23996", "accession": "GCA_003628505.1", "taxid": 930130, "species_taxid": 930130, "relation_to_type": "type", "validated": true, "ani": 77.166, "matched_fragments": 129, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus profundus", "strain": "strain=CL-MP28", "accession": "GCA_008087205.1", "taxid": 372463, "species_taxid": 372463, "relation_to_type": "type", "validated": true, "ani": 77.0865, "matched_fragments": 117, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus profundus", "strain": "strain=DSM 18246", "accession": "GCA_003515705.1", "taxid": 372463, "species_taxid": 372463, "relation_to_type": "type", "validated": true, "ani": 77.0315, "matched_fragments": 115, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquibacillus koreensis", "strain": "strain=JCM 12387", "accession": "GCA_025154055.1", "taxid": 279446, "species_taxid": 279446, "relation_to_type": "type", "validated": true, "ani": 76.976, "matched_fragments": 83, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saliterribacillus persicus", "strain": "strain=DSM 27696", "accession": "GCA_003337485.1", "taxid": 930114, "species_taxid": 930114, "relation_to_type": "type", "validated": true, "ani": 76.8845, "matched_fragments": 66, "total_fragments": 1296, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Virgibacillus subterraneus", 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