{ "tc_result": [ { "organism_name": "Clostridium cylindrosporum", "strain": "strain=DSM 605", "accession": "GCA_001047375.1", "taxid": 1495, "species_taxid": 1495, "relation_to_type": "type", "validated": true, "ani": 99.9718, "matched_fragments": 901, "total_fragments": 902, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Clostridium niameyense", "strain": "strain=MT5", "accession": "GCA_001243045.1", "taxid": 1622073, "species_taxid": 1622073, "relation_to_type": "type", "validated": true, "ani": 76.2676, "matched_fragments": 60, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium paraputrificum", "strain": "strain=NCTC11833", "accession": "GCA_900447045.1", "taxid": 29363, "species_taxid": 29363, "relation_to_type": "type", "validated": true, "ani": 76.2293, "matched_fragments": 56, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caloramator australicus", "strain": "strain=RC3", "accession": "GCA_000297115.1", "taxid": 515264, "species_taxid": 515264, "relation_to_type": "type", "validated": true, "ani": 75.9813, "matched_fragments": 53, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium perfringens", "strain": "strain=FDAARGOS_903", "accession": "GCA_016027375.1", "taxid": 1502, "species_taxid": 1502, "relation_to_type": "type", "validated": true, "ani": 75.9761, "matched_fragments": 71, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium magnum", "strain": "strain=DSM 2767", "accession": "GCA_001623875.1", "taxid": 33954, "species_taxid": 33954, "relation_to_type": "type", "validated": true, "ani": 75.969, "matched_fragments": 78, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium perfringens", "strain": "strain=ATCC 13124", "accession": "GCA_000013285.1", "taxid": 1502, "species_taxid": 1502, "relation_to_type": "type", "validated": true, "ani": 75.9376, "matched_fragments": 66, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium nigeriense", "strain": "strain=Marseille-P2414", "accession": "GCA_900086595.1", "taxid": 1805470, "species_taxid": 1805470, "relation_to_type": "type", "validated": true, "ani": 75.9212, "matched_fragments": 77, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium pasteurianum", "strain": "strain=ATCC 6013", "accession": "GCA_001856645.1", "taxid": 1501, "species_taxid": 1501, "relation_to_type": "type", "validated": true, "ani": 75.8795, "matched_fragments": 56, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium pasteurianum", "strain": "strain=DSM 525", "accession": "GCA_000807255.1", "taxid": 1501, "species_taxid": 1501, "relation_to_type": "type", "validated": true, "ani": 75.8348, "matched_fragments": 58, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium pasteurianum", "strain": "strain=DSM 525", "accession": "GCA_000330945.1", "taxid": 1501, "species_taxid": 1501, "relation_to_type": "type", "validated": true, "ani": 75.8183, "matched_fragments": 57, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium hydrogeniformans", "strain": "strain=DSM 21757", "accession": "GCA_000686705.1", "taxid": 349933, "species_taxid": 349933, "relation_to_type": "type", "validated": true, "ani": 75.7785, "matched_fragments": 81, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium magnum", "strain": "strain=DSM 2767", "accession": "GCA_900129955.1", "taxid": 33954, "species_taxid": 33954, "relation_to_type": "type", "validated": true, "ani": 75.5848, "matched_fragments": 75, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium arbusti", "strain": "strain=SL206", "accession": "GCA_000246895.2", "taxid": 1137848, "species_taxid": 1137848, "relation_to_type": "type", "validated": true, "ani": 75.5463, "matched_fragments": 57, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium lundense", "strain": "strain=DSM 17049", "accession": "GCA_000619945.1", "taxid": 319475, "species_taxid": 319475, "relation_to_type": "type", "validated": true, "ani": 75.5313, "matched_fragments": 65, "total_fragments": 902, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001047375.1", "gtdb_species": "s__Clostridium_AB cylindrosporum", "ani": 100.0, "matched_fragments": 900, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Caloramatoraceae;g__Clostridium_AB", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_000430995.1", "gtdb_species": "s__Thermobrachium celere", "ani": 77.288, "matched_fragments": 68, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Caloramatoraceae;g__Thermobrachium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.16", "min_intra_species_ani": "98.16", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017100085.1", "gtdb_species": "s__Clostridium_H botulinum_A", "ani": 76.3899, "matched_fragments": 50, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_H", "ani_circumscription_radius": 95.0162, "mean_intra_species_ani": "99.30", "min_intra_species_ani": "99.03", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.90", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_016908015.1", "gtdb_species": "s__Clostridium_AK pascui", "ani": 76.3204, "matched_fragments": 52, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_AK", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001243045.1", "gtdb_species": "s__Clostridium_F niameyense", "ani": 76.2968, "matched_fragments": 59, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_F", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.56", "min_intra_species_ani": "99.11", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_006016075.1", "gtdb_species": "s__Caloramator_B sp006016075", "ani": 76.2438, "matched_fragments": 63, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Caloramatoraceae;g__Caloramator_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900447045.1", "gtdb_species": "s__Clostridium paraputrificum", "ani": 76.2292, "matched_fragments": 56, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.58", "min_intra_species_ani": "95.42", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.83", "num_clustered_genomes": 29, "status": "-" }, { "accession": "GCF_000297115.1", "gtdb_species": "s__Caloramator australicus", "ani": 75.9813, "matched_fragments": 53, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Caloramatoraceae;g__Caloramator", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000204565.1", "gtdb_species": "s__Clostridium_H botulinum_B", "ani": 75.9717, "matched_fragments": 54, "total_fragments": 902, "gtdb_taxonomy": 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"d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_Z", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004794105.1", "gtdb_species": "s__Clostridium sartagoforme_B", "ani": 75.6878, "matched_fragments": 79, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.58", "min_intra_species_ani": "98.58", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000619945.1", "gtdb_species": "s__Clostridium_AO lundense", "ani": 75.5606, "matched_fragments": 63, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_AO", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000246895.1", "gtdb_species": "s__Clostridium_I arbusti", "ani": 75.5505, "matched_fragments": 57, "total_fragments": 902, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_I", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }