{
    "type": "genome",
    "identifier": "GCF_001078805.1",
    "organism": "Shigella flexneri 2a",
    "title": "Shigella flexneri 2a",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "SC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001078805.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA3107687",
        "wgs_master": "CELV00000000.1",
        "refseq_category": "na",
        "taxid": "42897",
        "species_taxid": "623",
        "organism_name": "Shigella flexneri 2a",
        "infraspecific_name": "strain=24570",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/07/09",
        "asm_name": "14928_1#79",
        "asm_submitter": "SC",
        "gbrs_paired_asm": "GCA_001078805.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/078/805/GCF_001078805.1_14928_1_79",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4719370",
        "genome_size_ungapped": "4718890",
        "gc_percent": "50.500000",
        "replicon_count": "0",
        "scaffold_count": "327",
        "contig_count": "327",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001078805.1-RS_2024_06_01",
        "annotation_date": "2024-06-01",
        "total_gene_count": "5123",
        "protein_coding_gene_count": "4255",
        "non_coding_gene_count": "119",
        "pubmed_id": "26021915"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-07-09",
    "dateModified": "2015-07-09",
    "datePublished": "2015-07-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Shigella flexneri"
        ],
        "sample_taxid": [
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        ],
        "sample_host_organism": [
            "unknown"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "Not known",
            "Not known"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.345 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4719370",
        "Number of Sequences": "327",
        "Longest Sequences (bp)": "165659",
        "N50 (bp)": "39568",
        "Gap Ratio (%)": "0.010404",
        "GCcontent (%)": "50.3",
        "Number of CDSs": "4708",
        "Average Protein Length": "280.8",
        "Coding Ratio (%)": "84.1",
        "Number of rRNAs": "5",
        "Number of tRNAs": "100",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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}