{ "type": "genome", "identifier": "GCF_001187535.1", "organism": "Rhizobium ecuadorense", "title": "Rhizobium ecuadorense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Embrapa Soja", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001187535.1", "bioproject": "PRJNA224116", "biosample": "SAMN03779945", "wgs_master": "LFIO00000000.1", "refseq_category": "reference genome", "taxid": "1671795", "species_taxid": "1671795", "organism_name": "Rhizobium ecuadorense", "infraspecific_name": "strain=CNPSO 671", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/07/27", "asm_name": "ASM118753v1", "asm_submitter": "Embrapa Soja", "gbrs_paired_asm": "GCA_001187535.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/187/535/GCF_001187535.1_ASM118753v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7383497", "genome_size_ungapped": "7383497", "gc_percent": "61.000000", "replicon_count": "0", "scaffold_count": "1891", "contig_count": "1891", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001187535.1-RS_2024_04_24", "annotation_date": "2024-04-24", "total_gene_count": "8249", "protein_coding_gene_count": "7239", "non_coding_gene_count": "50", "pubmed_id": "23764913;26383667" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-07-27", "dateModified": "2015-07-27", "datePublished": "2015-07-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhizobium ecuadorense" ], "sample_taxid": [ "1671795" ], "sample_host_organism": [ "Phaseolus vulgaris" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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2219, "total_fragments": 2227, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Rhizobium redzepovicii", "strain": "strain=18T", "accession": "GCA_019793435.1", "taxid": 2867518, "species_taxid": 2867518, "relation_to_type": "type", "validated": true, "ani": 92.548, "matched_fragments": 1779, "total_fragments": 2227, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium hidalgonense", "strain": "strain=FH14", "accession": "GCA_002914525.1", "taxid": 1538159, "species_taxid": 1538159, "relation_to_type": "type", "validated": true, "ani": 91.2915, "matched_fragments": 1748, "total_fragments": 2227, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium hidalgonense", "strain": "strain=FH14", "accession": "GCA_002531855.1", "taxid": 1538159, "species_taxid": 1538159, "relation_to_type": "type", "validated": true, "ani": 91.2907, "matched_fragments": 1749, "total_fragments": 2227, "ani_threshold": 95, "status": 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