{ "type": "genome", "identifier": "GCF_001190945.1", "organism": "Luteipulveratus mongoliensis", "title": "Luteipulveratus mongoliensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Novartis", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001190945.1", "bioproject": "PRJNA224116", "biosample": "SAMN03421079", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "571913", "species_taxid": "571913", "organism_name": "Luteipulveratus mongoliensis", "infraspecific_name": "strain=MN07-A0370", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/08/03", "asm_name": "ASM119094v1", "asm_submitter": "Novartis", "gbrs_paired_asm": "GCA_001190945.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/190/945/GCF_001190945.1_ASM119094v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5420910", "genome_size_ungapped": "5420910", "gc_percent": "68.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001190945.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "5218", "protein_coding_gene_count": "5147", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-08-03", "dateModified": "2015-08-03", "datePublished": "2015-08-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Luteipulveratus mongoliensis" ], "sample_taxid": [ "571913" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Mongolia: Terelj National Park, Toev Province, Ulaanbaatar" ], "sample_host_location_id": [], "data_size": "1.470 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5420910", "Number of Sequences": "1", "Longest Sequences (bp)": "5420910", "N50 (bp)": "5420910", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "68.2", "Number of CDSs": "5206", "Average Protein Length": "319.8", "Coding Ratio (%)": "92.1", "Number of rRNAs": "6", "Number of tRNAs": "54", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Luteipulveratus mongoliensis", "strain": "strain=MN07-A0370", "accession": "GCA_001190945.1", "taxid": 571913, "species_taxid": 571913, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1804, "total_fragments": 1806, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Luteipulveratus halotolerans", "strain": "strain=C296001", "accession": "GCA_001247745.1", "taxid": 1631356, "species_taxid": 1631356, "relation_to_type": "type", "validated": true, "ani": 82.1823, "matched_fragments": 957, "total_fragments": 1806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Barrientosiimonas humi", "strain": "strain=type strain: 39", "accession": "GCA_910573815.1", "taxid": 999931, "species_taxid": 999931, "relation_to_type": "type", "validated": true, "ani": 80.4609, "matched_fragments": 661, "total_fragments": 1806, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Barrientosiimonas humi", "strain": "strain=DSM 24617", "accession": "GCA_006716095.1", "taxid": 999931, "species_taxid": 999931, "relation_to_type": "type", "validated": true, "ani": 80.4363, "matched_fragments": 662, "total_fragments": 1806, "ani_threshold": 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