{
    "type": "genome",
    "identifier": "GCF_001192835.1",
    "organism": "Lentimicrobium saccharophilum",
    "title": "Lentimicrobium saccharophilum",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "National Institute of Advanced Industrial Science and Technology (AIST)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001192835.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00034990",
        "wgs_master": "BBYI00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1678841",
        "species_taxid": "1678841",
        "organism_name": "Lentimicrobium saccharophilum",
        "infraspecific_name": "strain=TBC1",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/07/31",
        "asm_name": "ASM119283v1",
        "asm_submitter": "National Institute of Advanced Industrial Science and Technology (AIST)",
        "gbrs_paired_asm": "GCA_001192835.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/192/835/GCF_001192835.1_ASM119283v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4514407",
        "genome_size_ungapped": "4508923",
        "gc_percent": "46.500000",
        "replicon_count": "0",
        "scaffold_count": "2",
        "contig_count": "15",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001192835.1-RS_2024_10_22",
        "annotation_date": "2024-10-22",
        "total_gene_count": "3387",
        "protein_coding_gene_count": "3321",
        "non_coding_gene_count": "51",
        "pubmed_id": "26450737;27098854"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-07-31",
    "dateModified": "2015-07-31",
    "datePublished": "2015-07-31",
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        "sample_organism": [
            "Lentimicrobium saccharophilum"
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        "sample_taxid": [
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        ],
        "sample_host_location_id": [],
        "data_size": "1.262 MB",
        "sample_ph_range": {
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            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4514407",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "3114282",
        "N50 (bp)": "3114282",
        "Gap Ratio (%)": "0.121744",
        "GCcontent (%)": "46.7",
        "Number of CDSs": "3308",
        "Average Protein Length": "391.0",
        "Coding Ratio (%)": "85.9",
        "Number of rRNAs": "4",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Lentimicrobium saccharophilum",
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                "relation_to_type": "type",
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        ],
        "cc_result": {
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            "contamination": 0.0,
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        },
        "gtdb_result": [
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Lentimicrobiaceae;g__Lentimicrobium",
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                "ani_circumscription_radius": 95.0,
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            {
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                "mean_intra_species_ani": "N/A",
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    "_genome_taxon": [
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        "saccharophilum"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}