{ "type": "genome", "identifier": "GCF_001270025.1", "organism": "Streptomyces azureus", "title": "Streptomyces azureus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Microbial Genetics Division, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001270025.1", "bioproject": "PRJNA224116", "biosample": "SAMD00031377", "wgs_master": "BBYS00000000.1", "refseq_category": "reference genome", "taxid": "146537", "species_taxid": "146537", "organism_name": "Streptomyces azureus", "infraspecific_name": "strain=ATCC 14921", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/08/06", "asm_name": "Sazu_1.0", "asm_submitter": "Microbial Genetics Division, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University", "gbrs_paired_asm": "GCA_001270025.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/270/025/GCF_001270025.1_Sazu_1.0", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8790205", "genome_size_ungapped": "8789954", "gc_percent": "71.000000", "replicon_count": "0", "scaffold_count": "350", "contig_count": "364", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001270025.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "8357", "protein_coding_gene_count": "7774", "non_coding_gene_count": "78", "pubmed_id": "26494661" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-08-06", "dateModified": "2015-08-06", "datePublished": "2015-08-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces azureus" ], "sample_taxid": [ "146537" ], 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"min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014205255.1", "gtdb_species": "s__Streptomyces caelestis", "ani": 94.6468, "matched_fragments": 2314, "total_fragments": 2790, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_000415505.1", "gtdb_species": "s__Streptomyces afghaniensis", "ani": 93.8413, "matched_fragments": 2061, "total_fragments": 2790, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": 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"mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007655005.1", "gtdb_species": "s__Streptomyces tibetensis", "ani": 90.1126, "matched_fragments": 2087, "total_fragments": 2790, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.201, "cell_length": -0.05, "doubling_h": 0.103, "growth_tmp": 27.0, "optimum_tmp": 29.036, "optimum_ph": 7.341, "genome_size": 8790000.0, "gc_content": 71.543, "coding_genes": 7141.289, "rRNA16S_genes": 6.155, "tRNA_genes": 67.804, "gram_stain": 1.0, "sporulation": 0.958, "motility": 0.049, "range_salinity": 0.666, 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