{ "type": "genome", "identifier": "GCF_001280435.1", "organism": "Mangrovimonas xylaniphaga", "title": "Mangrovimonas xylaniphaga", "description": "na", "data type": "Genome sequencing and assembly", "organization": "UNIVERSITI SAINS MALAYSIA", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001280435.1", "bioproject": "PRJNA224116", "biosample": "SAMN03494314", "wgs_master": "LBIP00000000.1", "refseq_category": "reference genome", "taxid": "1645915", "species_taxid": "1645915", "organism_name": "Mangrovimonas xylaniphaga", "infraspecific_name": "strain=ST2L12", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/09/09", "asm_name": "ASM128043v1", "asm_submitter": "UNIVERSITI SAINS MALAYSIA", "gbrs_paired_asm": "GCA_001280435.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/280/435/GCF_001280435.1_ASM128043v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3827241", "genome_size_ungapped": "3827241", "gc_percent": "38.500000", "replicon_count": "0", "scaffold_count": "42", "contig_count": "42", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001280435.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "3361", "protein_coding_gene_count": "3289", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-09-09", "dateModified": "2015-09-09", "datePublished": "2015-09-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Mangrovimonas xylaniphaga" ], "sample_taxid": [ "1645915" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Malaysia: Perak" ], "sample_host_location_id": [], "data_size": "1.080 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3827241", "Number of Sequences": "42", "Longest Sequences (bp)": "1998227", "N50 (bp)": "1998227", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "38.3", "Number of CDSs": "3255", "Average Protein Length": "351.1", "Coding Ratio (%)": "89.6", "Number of rRNAs": "3", "Number of tRNAs": "40", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Mangrovimonas xylaniphaga", "strain": "strain=ST2L12", "accession": "GCA_001280435.1", "taxid": 1645915, "species_taxid": 1645915, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1261, "total_fragments": 1263, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Aestuariibaculum marinum", "strain": "strain=IP7", "accession": "GCA_014596975.1", "taxid": 2683592, "species_taxid": 2683592, "relation_to_type": "type", "validated": true, "ani": 78.0595, "matched_fragments": 168, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariibaculum suncheonense", "strain": "strain=SC17", "accession": "GCA_014596935.1", "taxid": 1028745, "species_taxid": 1028745, "relation_to_type": "type", "validated": true, "ani": 77.5045, "matched_fragments": 186, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanihabitans sediminis", "strain": "strain=DSM 28133", "accession": "GCA_003315315.1", "taxid": 1812012, "species_taxid": 1812012, "relation_to_type": "type", "validated": true, "ani": 77.4893, "matched_fragments": 141, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Formosa haliotis", "strain": "strain=LMG 28520", "accession": "GCA_001685485.1", "taxid": 1555194, "species_taxid": 1555194, "relation_to_type": "type", "validated": true, "ani": 77.4205, "matched_fragments": 163, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera neustonica", "strain": "strain=JCM19743", "accession": "GCA_002895005.1", "taxid": 1445657, "species_taxid": 1445657, "relation_to_type": "type", "validated": true, "ani": 77.4128, "matched_fragments": 152, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Psychroserpens jangbogonensis", "strain": "strain=PAMC 27130", "accession": "GCA_000797465.1", "taxid": 1484460, "species_taxid": 1484460, "relation_to_type": "type", "validated": true, "ani": 77.411, "matched_fragments": 155, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanihabitans sediminis", "strain": "strain=S9-10", "accession": "GCA_003337215.1", "taxid": 1812012, "species_taxid": 1812012, "relation_to_type": "type", "validated": true, "ani": 77.4052, "matched_fragments": 139, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tamlana haliotis", "strain": "strain=B1N29", "accession": "GCA_008806375.1", "taxid": 2614804, "species_taxid": 2614804, "relation_to_type": "type", "validated": true, "ani": 77.3947, "matched_fragments": 149, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera marina", "strain": "strain=NBU2968", "accession": "GCA_019880635.1", "taxid": 2873265, "species_taxid": 2873265, "relation_to_type": "type", "validated": true, "ani": 77.3407, "matched_fragments": 150, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariibaculum sediminum", "strain": "strain=TT11", "accession": "GCA_014596945.1", "taxid": 2770637, "species_taxid": 2770637, "relation_to_type": "type", "validated": true, "ani": 77.3331, "matched_fragments": 150, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera flava", "strain": "strain=NBU2984", "accession": "GCA_023634025.1", "taxid": 2930218, "species_taxid": 2930218, "relation_to_type": "type", "validated": true, "ani": 77.3298, "matched_fragments": 152, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tamlana agarivorans", "strain": "strain=JW-26", "accession": "GCA_001642835.1", "taxid": 481183, "species_taxid": 481183, "relation_to_type": "type", "validated": true, "ani": 77.3008, "matched_fragments": 149, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Psychroserpens mesophilus", "strain": "strain=JCM 13413", "accession": "GCA_000826645.1", "taxid": 325473, "species_taxid": 325473, "relation_to_type": "type", "validated": true, "ani": 77.2883, "matched_fragments": 174, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tamlana crocina", "strain": "strain=HST1-43", "accession": "GCA_012037625.1", "taxid": 393006, "species_taxid": 393006, "relation_to_type": "type", "validated": true, "ani": 77.2009, "matched_fragments": 160, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gelidibacter gilvus", "strain": "strain=IC158", "accession": "GCA_004115975.1", "taxid": 59602, "species_taxid": 59602, "relation_to_type": "type", "validated": true, "ani": 77.1949, "matched_fragments": 153, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariivivens insulae", "strain": "strain=AH-MY3", "accession": "GCA_022662195.1", "taxid": 1621988, "species_taxid": 1621988, "relation_to_type": "type", "validated": true, "ani": 77.1841, "matched_fragments": 149, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyunsoonleella flava", "strain": "strain=T58", "accession": "GCA_004310325.1", "taxid": 2527939, "species_taxid": 2527939, "relation_to_type": "type", "validated": true, "ani": 77.1588, "matched_fragments": 124, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera ponticola", "strain": "strain=MM-14", "accession": "GCA_012931685.1", "taxid": 2042995, "species_taxid": 2042995, "relation_to_type": "type", "validated": true, "ani": 77.1549, "matched_fragments": 161, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mariniflexile gromovii", "strain": "strain=KCTC 12570", "accession": "GCA_017814435.1", "taxid": 362523, "species_taxid": 362523, "relation_to_type": "type", "validated": true, "ani": 77.1404, "matched_fragments": 175, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella schleiferi", "strain": "strain=Z215", "accession": "GCA_013394655.1", "taxid": 2686078, "species_taxid": 2686078, "relation_to_type": "type", "validated": true, "ani": 77.1147, "matched_fragments": 138, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pontimicrobium aquaticum", "strain": "strain=CAU 1491", "accession": "GCA_005047595.1", "taxid": 2565367, "species_taxid": 2565367, "relation_to_type": "type", "validated": true, "ani": 77.1046, "matched_fragments": 153, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella costae", "strain": "strain=Z3138", "accession": "GCA_013403865.1", "taxid": 2697008, "species_taxid": 2697008, "relation_to_type": "type", "validated": true, "ani": 77.0822, "matched_fragments": 137, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavivirga algicola", "strain": "strain=Y03", "accession": "GCA_012910715.1", "taxid": 2729136, "species_taxid": 2729136, "relation_to_type": "type", "validated": true, "ani": 77.0654, "matched_fragments": 153, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter mikhailovii", "strain": "strain=KCTC 12710", "accession": "GCA_014651495.1", "taxid": 425498, "species_taxid": 425498, "relation_to_type": "type", "validated": true, "ani": 77.0467, "matched_fragments": 135, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyunsoonleella ulvae", "strain": "strain=HU1-3", "accession": "GCA_016827605.1", "taxid": 2799948, "species_taxid": 2799948, "relation_to_type": "type", "validated": true, "ani": 77.0269, "matched_fragments": 117, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella forsetii", "strain": "strain=HL857", "accession": "GCA_013394595.1", "taxid": 2686077, "species_taxid": 2686077, "relation_to_type": "type", "validated": true, "ani": 77.0191, "matched_fragments": 142, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001280435.1", "gtdb_species": "s__Mangrovimonas_A xylaniphaga", "ani": 100.0, "matched_fragments": 1261, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mangrovimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.35", "min_intra_species_ani": "96.35", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_001280505.1", "gtdb_species": "s__Mangrovimonas_A sp001280505", "ani": 89.2784, "matched_fragments": 1061, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mangrovimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014596975.1", "gtdb_species": "s__Aestuariibaculum marinum", "ani": 78.0595, "matched_fragments": 168, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aestuariibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004366715.1", "gtdb_species": "s__Meridianimaribacter flavus", "ani": 77.8648, "matched_fragments": 270, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Meridianimaribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.44", "min_intra_species_ani": "97.06", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001280515.1", "gtdb_species": "s__Mangrovimonas sp001280515", "ani": 77.6797, "matched_fragments": 200, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mangrovimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.69", "min_intra_species_ani": "96.69", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003550275.1", "gtdb_species": "s__QXCW01 sp003550275", "ani": 77.5863, "matched_fragments": 204, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__QXCW01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.16", "min_intra_species_ani": "98.16", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014596935.1", "gtdb_species": "s__Aestuariibaculum suncheonense", "ani": 77.4922, "matched_fragments": 185, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aestuariibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002895005.1", "gtdb_species": "s__Hanstruepera neustonica", "ani": 77.4128, "matched_fragments": 152, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Hanstruepera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003337215.1", "gtdb_species": "s__Oceanihabitans sediminis", "ani": 77.3853, "matched_fragments": 140, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Oceanihabitans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004341235.1", "gtdb_species": "s__Mariniflexile fucanivorans", "ani": 77.3666, "matched_fragments": 158, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mariniflexile", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002426015.1", "gtdb_species": "s__Aquaticitalea sp002426015", "ani": 77.3046, "matched_fragments": 185, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquaticitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002722255.1", "gtdb_species": "s__Winogradskyella sp002722255", "ani": 77.2721, "matched_fragments": 134, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Winogradskyella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.90", "min_intra_species_ani": "99.90", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.80", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004115975.1", "gtdb_species": "s__Gelidibacter gilvus", "ani": 77.1949, "matched_fragments": 153, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gelidibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002426755.1", "gtdb_species": "s__Aquaticitalea sp002426755", "ani": 77.159, "matched_fragments": 180, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquaticitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003337305.1", "gtdb_species": "s__Winogradskyella arenosi", "ani": 77.146, "matched_fragments": 136, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Winogradskyella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017814435.1", "gtdb_species": "s__Mariniflexile gromovii", "ani": 77.1404, "matched_fragments": 175, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mariniflexile", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013394655.1", "gtdb_species": "s__Winogradskyella schleiferi", "ani": 77.1147, "matched_fragments": 138, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Winogradskyella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014651495.1", "gtdb_species": "s__Algibacter_E mikhailovii", "ani": 77.0467, "matched_fragments": 135, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003258355.1", "gtdb_species": "s__Confluentibacter sp003258355", "ani": 76.9694, "matched_fragments": 158, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Confluentibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002280395.1", "gtdb_species": "s__Confluentibacter sp002280395", "ani": 76.6422, "matched_fragments": 96, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Confluentibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002414705.1", "gtdb_species": "s__Algorimicrobium sp002414705", "ani": 76.4147, "matched_fragments": 151, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algorimicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.398, "cell_length": 0.23, "doubling_h": null, "growth_tmp": null, "optimum_tmp": 30.25, "optimum_ph": 8.0, "genome_size": 2670033.0, "gc_content": 39.2, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 0.0, "sporulation": 0.0, "motility": 1.0, "range_salinity": 1.0, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Mangrovimonas", "xylaniphaga" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }