{ "type": "genome", "identifier": "GCF_001282725.1", "organism": "Inediibacterium massiliense", "title": "Inediibacterium massiliense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "URMITE", "publication": [ {} ], "properties": { "assembly_accession": "GCF_001282725.1", "bioproject": "PRJNA224116", "biosample": "SAMEA3502534", "wgs_master": "CXYX00000000.1", "refseq_category": "reference genome", "taxid": "1658111", "species_taxid": "1658111", "organism_name": "Inediibacterium massiliense", "infraspecific_name": "strain=Mt12", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/08/20", "asm_name": "Malnutritionisia massiliensis", "asm_submitter": "URMITE", "gbrs_paired_asm": "GCA_001282725.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/282/725/GCF_001282725.1_Malnutritionisia_massiliensis", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3497276", "genome_size_ungapped": "3496869", "gc_percent": "30.500000", "replicon_count": "0", "scaffold_count": "14", "contig_count": "15", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_001282725.1-RS_2024_04_07", "annotation_date": "2024-04-07", "total_gene_count": "3396", "protein_coding_gene_count": "3246", "non_coding_gene_count": "133", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-08-20", "dateModified": "2015-08-20", "datePublished": "2015-08-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Inediibacterium massiliense" ], "sample_taxid": [ "1658111" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"accession": "GCA_002553615.1", "taxid": 137838, "species_taxid": 137838, "relation_to_type": "type", "validated": true, "ani": 75.9133, "matched_fragments": 84, "total_fragments": 1160, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alkaliphilus flagellatus", "strain": "strain=MSJ-5", "accession": "GCA_018919215.1", "taxid": 2841507, "species_taxid": 2841507, "relation_to_type": "type", "validated": true, "ani": 75.8954, "matched_fragments": 89, "total_fragments": 1160, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paramaledivibacter caminithermalis", "strain": "strain=DSM 15212", "accession": "GCA_900142245.1", "taxid": 191027, "species_taxid": 191027, "relation_to_type": "type", "validated": true, "ani": 75.764, "matched_fragments": 102, "total_fragments": 1160, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium niameyense", "strain": "strain=MT5", "accession": "GCA_001243045.1", "taxid": 1622073, 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