{
    "type": "genome",
    "identifier": "GCF_001375675.1",
    "organism": "Massilibacterium senegalense",
    "title": "Massilibacterium senegalense",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "URMITE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_001375675.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMEA3312309",
        "wgs_master": "CTRN00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1632858",
        "species_taxid": "1632858",
        "organism_name": "Massilibacterium senegalense",
        "infraspecific_name": "strain=mt8",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/04/22",
        "asm_name": "Massilibacterium senegalense",
        "asm_submitter": "URMITE",
        "gbrs_paired_asm": "GCA_001375675.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/375/675/GCF_001375675.1_Massilibacterium_senegalense",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2849407",
        "genome_size_ungapped": "2848543",
        "gc_percent": "35.500000",
        "replicon_count": "0",
        "scaffold_count": "10",
        "contig_count": "12",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_001375675.1-RS_2024_12_09",
        "annotation_date": "2024-12-09",
        "total_gene_count": "2915",
        "protein_coding_gene_count": "2738",
        "non_coding_gene_count": "93",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-04-22",
    "dateModified": "2015-04-22",
    "datePublished": "2015-04-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Massilibacterium senegalense"
        ],
        "sample_taxid": [
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.795 MB",
        "sample_ph_range": {
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            "max": null
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        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2849407",
        "Number of Sequences": "10",
        "Longest Sequences (bp)": "2192745",
        "N50 (bp)": "2192745",
        "Gap Ratio (%)": "0.030708",
        "GCcontent (%)": "35.7",
        "Number of CDSs": "2874",
        "Average Protein Length": "279.4",
        "Coding Ratio (%)": "84.6",
        "Number of rRNAs": "15",
        "Number of tRNAs": "69",
        "Number of CRISPRs": "7"
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                "ani": 76.2078,
                "matched_fragments": 72,
                "total_fragments": 943,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Anoxybacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.46",
                "min_intra_species_ani": "96.29",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "-"
            }
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        "growth_tmp": 37.0,
        "optimum_tmp": null,
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        "genome_size": 2847590.0,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "filament_cell_shape": null,
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        "vibrio_cell_shape": null,
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    "_genome_taxon": [
        "Massilibacterium",
        "senegalense"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}